mRNA_H-paniculata_contig3098.8377.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3098.8377.1 vs. uniprot
Match: D7G5K3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5K3_ECTSI) HSP 1 Score: 210 bits (535), Expect = 2.300e-67 Identity = 98/118 (83.05%), Postives = 113/118 (95.76%), Query Frame = 1
Query: 46 MRLLTHNVLRSPIKGASDGYPLKIEATDVQMVETEVKEEFVKHVASTLDWNALCKAASEVGLPDGSLPPALTPDLLDDSSFLQALHRVLMDMHVVEGALICPESGRRFPITEGVPDLM 399
MRLLTHNVLRSP+KG +GYPL+IEATDVQMVE+EVKEEFVKH+A+TLDW ALCKAA+EVG+P+GSLPPALTP+LL+DSSFL+ALHRVLMDMHVVEG L+CPE+GRRFPI EGVP+LM
Sbjct: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLM 118
BLAST of mRNA_H-paniculata_contig3098.8377.1 vs. uniprot
Match: A0A836CHT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHT2_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.150e-47 Identity = 78/127 (61.42%), Postives = 97/127 (76.38%), Query Frame = 1
Query: 46 MRLLTHNVLRSPIKGASDGYPLKIEATDVQMVETEVKEEFVKHVASTLDWNALCKAASEVGLPDGSLPPALTPDLLDDSSFLQALHRVLMDMHVVEGALICPESGRRFPITEGVPDLMWVA--FPRD 420
MRLLTHNVLR IKG +GYPL IEA++VQM E+ + +FVKH+A TL+W AL +A +VGLP+ LP A++ LL D +FL+ALHRVLMD+HVV GAL+CPESGRRFPI G+PD+M PRD
Sbjct: 1 MRLLTHNVLRCAIKGVEEGYPLSIEASEVQMEESPFRPDFVKHIAPTLNWPALRQAVKQVGLPEDMLPEAVSDALLGDEAFLRALHRVLMDVHVVAGALVCPESGRRFPIAHGIPDMMIAEGECPRD 127
BLAST of mRNA_H-paniculata_contig3098.8377.1 vs. uniprot
Match: A0A1Y1INK2_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INK2_KLENI) HSP 1 Score: 127 bits (319), Expect = 1.310e-34 Identity = 58/118 (49.15%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 46 MRLLTHNVLRSPIKGASDGYPLKIEATDVQMVETEVKEEFVKHVASTLDWNALCKAASEVGLPDGSLPPALTPDLLDDSSFLQALHRVLMDMHVVEGALICPESGRRFPITEGVPDLM 399
MRLLTHN+L IKG + GYPLKIEAT + ET+ F++H+ LDW AL +AA+ +GL + LP + P L+D FL+ H VL+++H+ EGAL+CPE+GRRFP+++G+P+++
Sbjct: 1 MRLLTHNMLACNIKGVTKGYPLKIEATKTEEKETDFNAGFLRHIYPKLDWKALREAAASLGLEE--LPEQVEPSQLEDEDFLRRFHHVLLEIHLEEGALVCPETGRRFPVSKGIPNML 116
BLAST of mRNA_H-paniculata_contig3098.8377.1 vs. uniprot
Match: W7U893_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U893_9STRA) HSP 1 Score: 125 bits (314), Expect = 8.180e-34 Identity = 58/118 (49.15%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 46 MRLLTHNVLRSPIKGASDGYPLKIEATDVQMVETEVKEEFVKHVASTLDWNALCKAASEVGLPDGSLPPALTPDLLDDSSFLQALHRVLMDMHVVEGALICPESGRRFPITEGVPDLM 399
MRLL+HNVLR+ KG DGYPLKIEA + + +TE F++H+ T+ + L AA ++GL + P + + L +D +FL+ALH+ L D+HV+EG+L+CPESGRRF I G+PD+M
Sbjct: 1 MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLTFIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMM 118
BLAST of mRNA_H-paniculata_contig3098.8377.1 vs. uniprot
Match: A9S9D3_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S9D3_PHYPA) HSP 1 Score: 123 bits (308), Expect = 6.040e-33 Identity = 56/118 (47.46%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 46 MRLLTHNVLRSPIKGASDGYPLKIEATDVQMVETEVKEEFVKHVASTLDWNALCKAASEVGLPDGSLPPALTPDLLDDSSFLQALHRVLMDMHVVEGALICPESGRRFPITEGVPDLM 399
MRLLTHN+L IKG + G+PL IE T ++ E+E+ +F++H+ LDW A +AA VG+ ++P + P +LDD FL+ H L+++H+ EGALICPE+GRRFP+T+GVP+++
Sbjct: 1 MRLLTHNMLACNIKGVTKGFPLGIEHTRLETKESELNADFLRHIFPKLDWKAFHEAAQSVGV--NNIPDQVEPVMLDDDEFLRKFHHALLEVHLEEGALICPETGRRFPVTKGVPNML 116
BLAST of mRNA_H-paniculata_contig3098.8377.1 vs. uniprot
Match: A0A803QXK8_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QXK8_CANSA) HSP 1 Score: 122 bits (307), Expect = 8.550e-33 Identity = 56/118 (47.46%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 46 MRLLTHNVLRSPIKGASDGYPLKIEATDVQMVETEVKEEFVKHVASTLDWNALCKAASEVGLPDGSLPPALTPDLLDDSSFLQALHRVLMDMHVVEGALICPESGRRFPITEGVPDLM 399
MRLLTHN+L S IKG ++G+PL+IE V E E+ +F+K + S +DW AL +AA +G + LP + P +LD FL+ H L+ +H+ EGALICPE+GRRFP+T+G+P+++
Sbjct: 1 MRLLTHNMLSSNIKGVTNGFPLRIEVVKVVEKEVELNPDFLKSMFSKIDWKALVEAARSIGYTE--LPNEVDPSMLDSDDFLRRFHHALLQLHLEEGALICPETGRRFPVTKGIPNML 116
BLAST of mRNA_H-paniculata_contig3098.8377.1 vs. uniprot
Match: W7TQC2_9STRA (TRM112-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQC2_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.370e-32 Identity = 59/136 (43.38%), Postives = 94/136 (69.12%), Query Frame = 1
Query: 10 VPLFKTRE------ESTTMRLLTHNVLRSPIKGASDGYPLKIEATDVQMVETEVKEEFVKHVASTLDWNALCKAASEVGLPDGSLPPALTPDLLDDSSFLQALHRVLMDMHVVEGALICPESGRRFPITEGVPDLM 399
+PL T++ + MRL+THN+L+S +KG +G+PL+IEA V++ ETE EFV+++ +DW AL A+ E+G+ + LP + D SFLQ +H++L+D+HV+EG+L+CPE+GRRFPI G+P+++
Sbjct: 34 IPLNSTKKYHQHAPTTVVMRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDE--LPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNML 167
BLAST of mRNA_H-paniculata_contig3098.8377.1 vs. uniprot
Match: A0A2R5GJB0_9STRA (Multifunctional methyltransferase subunit TRM112-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJB0_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.430e-32 Identity = 56/118 (47.46%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 46 MRLLTHNVLRSPIKGASDGYPLKIEATDVQMVETEVKEEFVKHVASTLDWNALCKAASEVGLPDGSLPPALTPDLLDDSSFLQALHRVLMDMHVVEGALICPESGRRFPITEGVPDLM 399
M+LLTHN+L+ +KG ++GYPLKIE T ++ ETE+ F++ + L+W AA+++G + LP A+TP+LL+ FL+ HR L+++ VVEGALICPESGR+F IT G+P+++
Sbjct: 1 MKLLTHNMLKCNVKGVNNGYPLKIEVTTKEIRETEMNPAFLQGIVEKLEWPVFRAAAAQLG--EEGLPEAVTPELLEQEDFLKKFHRALLEVVVVEGALICPESGRKFTITNGIPNML 116
BLAST of mRNA_H-paniculata_contig3098.8377.1 vs. uniprot
Match: A0A2P6VL84_9CHLO (Multifunctional methyltransferase subunit TRM112 At1g22270 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VL84_9CHLO) HSP 1 Score: 119 bits (299), Expect = 1.380e-31 Identity = 50/118 (42.37%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 46 MRLLTHNVLRSPIKGASDGYPLKIEATDVQMVETEVKEEFVKHVASTLDWNALCKAASEVGLPDGSLPPALTPDLLDDSSFLQALHRVLMDMHVVEGALICPESGRRFPITEGVPDLM 399
M+LLTHN+L IKG +G+P KIEA V++ E + + +F++H+ + W ALC+AA+ +G+ LP T ++L+D +F++ H L+++H+ EGAL+CPE+GR+FP++ G+P+L+
Sbjct: 1 MKLLTHNMLACHIKGVQNGFPFKIEAEKVEVQEADFEPDFLQHIFPRIQWAALCEAAAAMGVE--GLPAEATEEMLEDDAFMKKFHHALLEVHLQEGALVCPETGRKFPVSAGIPNLL 116
BLAST of mRNA_H-paniculata_contig3098.8377.1 vs. uniprot
Match: A0A388LY57_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LY57_CHABU) HSP 1 Score: 119 bits (299), Expect = 1.380e-31 Identity = 54/118 (45.76%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 46 MRLLTHNVLRSPIKGASDGYPLKIEATDVQMVETEVKEEFVKHVASTLDWNALCKAASEVGLPDGSLPPALTPDLLDDSSFLQALHRVLMDMHVVEGALICPESGRRFPITEGVPDLM 399
MRLLTHN+L +KG + GYPLKIEA ++ E E +F++ + LDW AL + A + L + LP P +L+D +FLQ LH VL+++++ EGAL+CPE+GRRFP+++G+P+++
Sbjct: 1 MRLLTHNMLTCNVKGVTKGYPLKIEAVRLEKKEAEFNPDFLRRIFPKLDWKALYETALSLDLDE--LPEQAEPSMLEDEAFLQKLHHVLLEVNLEEGALVCPETGRRFPVSKGIPNML 116 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3098.8377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3098.8377.1 >prot_H-paniculata_contig3098.8377.1 ID=prot_H-paniculata_contig3098.8377.1|Name=mRNA_H-paniculata_contig3098.8377.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp MRLLTHNVLRSPIKGASDGYPLKIEATDVQMVETEVKEEFVKHVASTLDWback to top mRNA from alignment at H-paniculata_contig3098:3614..5534+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3098.8377.1 ID=mRNA_H-paniculata_contig3098.8377.1|Name=mRNA_H-paniculata_contig3098.8377.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1921bp|location=Sequence derived from alignment at H-paniculata_contig3098:3614..5534+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3098:3614..5534+ >mRNA_H-paniculata_contig3098.8377.1 ID=mRNA_H-paniculata_contig3098.8377.1|Name=mRNA_H-paniculata_contig3098.8377.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=822bp|location=Sequence derived from alignment at H-paniculata_contig3098:3614..5534+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |