mRNA_H-paniculata_contig11303.837.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11303.837.1 vs. uniprot
Match: A0A6H5KAF3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF3_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 1.280e-8 Identity = 27/111 (24.32%), Postives = 58/111 (52.25%), Query Frame = 1 Query: 1 MVIDGSPSGAWSIFEDWFRDTTSGARARVRTEFENLAVQPNETLNEFLARSFIIVERMKEIGVDMTETEVHHQIVRSLPHRFAIAKHMMLMTTNLSRKDLDEGVRTAKLEM 333 ++ DGSPSG W IF +++ + R+ +++ L ++ ET ++ R ++ R+ GV ++ + + +V L + + K + + SR+ +++GVR A E+ Sbjct: 94 IIADGSPSGGWKIFLNYYEPRARAEKERLSSQYHGLEMKVGETPQDYFGRFAVLRSRLAPHGVIFSDEDANAHMVYHLSDEYMMEKILTMSPIPRSREKIEKGVRDAHAEL 204
BLAST of mRNA_H-paniculata_contig11303.837.1 vs. uniprot
Match: A0A6P5SZJ2_PRUAV (uncharacterized protein LOC110761055 n=2 Tax=Prunus avium TaxID=42229 RepID=A0A6P5SZJ2_PRUAV) HSP 1 Score: 52.4 bits (124), Expect = 9.950e-6 Identity = 30/104 (28.85%), Postives = 54/104 (51.92%), Query Frame = 1 Query: 25 GAWSIFEDWFRDTTSGARAR---VRTEFENLAVQPNETLNEFLARSFIIVERMKEIGVDMTETEVHHQIVRSLPHRFAIAKHMMLMTTNLSRKDLDEGVRTAKL 327 GAW I FR + +R +FE L + E+L+++LAR F IV +K +G D+TE + +++ SL R+ ++ T +L ++E + + K+ Sbjct: 109 GAWEILRREFRGDKKVRAVKLQAIRADFEYLRMNDVESLDDYLARFFEIVNNLKSLGEDVTEKRIVQKLLMSLSRRYKSIMSIIEETRDLDTIRVEEILASVKV 212
BLAST of mRNA_H-paniculata_contig11303.837.1 vs. uniprot
Match: UPI00051177EB (uncharacterized protein LOC103929663 n=1 Tax=Pyrus x bretschneideri TaxID=225117 RepID=UPI00051177EB) HSP 1 Score: 52.0 bits (123), Expect = 1.770e-5 Identity = 30/104 (28.85%), Postives = 53/104 (50.96%), Query Frame = 1 Query: 25 GAWSIFEDWFRDTTSGARAR---VRTEFENLAVQPNETLNEFLARSFIIVERMKEIGVDMTETEVHHQIVRSLPHRFAIAKHMMLMTTNLSRKDLDEGVRTAKL 327 GAW I FR + +R FE L + E+L+++LAR F IV +K +G D+TE + +++ SL R+ ++ T +L ++E + + K+ Sbjct: 103 GAWEILRREFRGNKKVRAVKLQAIRAGFEYLRMNDAESLDDYLARFFEIVNNLKSLGEDVTEKRIVQKLLMSLSRRYKSIVSIIEETRDLDTIRIEEVLASVKV 206
BLAST of mRNA_H-paniculata_contig11303.837.1 vs. uniprot
Match: UPI00051155D3 (uncharacterized protein LOC103961609 n=2 Tax=Maleae TaxID=721813 RepID=UPI00051155D3) HSP 1 Score: 52.0 bits (123), Expect = 2.100e-5 Identity = 30/104 (28.85%), Postives = 54/104 (51.92%), Query Frame = 1 Query: 25 GAWSIFEDWFRDTTSGARAR---VRTEFENLAVQPNETLNEFLARSFIIVERMKEIGVDMTETEVHHQIVRSLPHRFAIAKHMMLMTTNLSRKDLDEGVRTAKL 327 GAW I FR + +R +FE L + E+L+++LAR F IV +K +G D+TE + +++ SL R+ ++ T +L ++E + + K+ Sbjct: 109 GAWEILRREFRGDKKVRAVKLQAIRADFEYLRMNDVESLDDYLARFFEIVNNLKSLGEDVTEKRIVQKLLMSLGRRYKSIVSIIEETRDLDTIRVEEVLASVKV 212
BLAST of mRNA_H-paniculata_contig11303.837.1 vs. uniprot
Match: A0A836DN27_9ROSI (TMV resistance protein n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DN27_9ROSI) HSP 1 Score: 51.2 bits (121), Expect = 2.660e-5 Identity = 28/104 (26.92%), Postives = 56/104 (53.85%), Query Frame = 1 Query: 25 GAWSIFEDWFRDTTSGARAR---VRTEFENLAVQPNETLNEFLARSFIIVERMKEIGVDMTETEVHHQIVRSLPHRFAIAKHMMLMTTNLSRKDLDEGVRTAKL 327 GAW I + FR A+ +R +FE + + +++LN +LA+ F +V K +G ++TET + +++ SL R+ ++ T +L ++E + + K+ Sbjct: 78 GAWGILKREFRGDKKVRAAKLQAIRDDFEYMRMSKSDSLNNYLAKFFEVVNDFKSLGEEVTETRLVRKLLMSLCRRYNSIVSIIEETRDLDWLRIEEVIASVKV 181
BLAST of mRNA_H-paniculata_contig11303.837.1 vs. uniprot
Match: A0A6P5U4D8_PRUAV (uncharacterized protein LOC110773958 n=1 Tax=Prunus avium TaxID=42229 RepID=A0A6P5U4D8_PRUAV) HSP 1 Score: 51.6 bits (122), Expect = 2.910e-5 Identity = 30/104 (28.85%), Postives = 54/104 (51.92%), Query Frame = 1 Query: 25 GAWSIFEDWFRDTTSGARAR---VRTEFENLAVQPNETLNEFLARSFIIVERMKEIGVDMTETEVHHQIVRSLPHRFAIAKHMMLMTTNLSRKDLDEGVRTAKL 327 GAW I FR + +R +FE L + E+L+++LAR F IV +K +G D+TE + +++ SL R+ ++ T +L ++E + + K+ Sbjct: 98 GAWEILRREFRGDKKVIAVKLQAIRADFEYLRMNDVESLDDYLARFFGIVNNLKSLGEDVTEKRIVQKLLMSLSRRYKSIVSIIEETRDLETIRVEEILASVKV 201
BLAST of mRNA_H-paniculata_contig11303.837.1 vs. uniprot
Match: UPI00063AB69A (uncharacterized protein LOC105767199 n=1 Tax=Gossypium raimondii TaxID=29730 RepID=UPI00063AB69A) HSP 1 Score: 51.2 bits (121), Expect = 3.270e-5 Identity = 31/109 (28.44%), Postives = 56/109 (51.38%), Query Frame = 1 Query: 1 MVIDGSPSGAWSIFEDWFRDTTSGARARV---RTEFENLAVQPNETLNEFLARSFIIVERMKEIGVDMTETEVHHQIVRSLPHRFAIAKHMMLMTTNLSRKDLDEGVRT 318 M D SP AW ++ F T + +V R +FENL ++ +ET+ ++ R IV ++ +GVD TE+ V +++ +L +F + + +LS L E + + Sbjct: 84 MACD-SPKQAWEKLKEEFMGTDKTRQQQVMNLRRDFENLRMRESETIKQYSDRIMAIVNSIRLLGVDFTESRVVEKVITTLSEKFESKISSLEDSRDLSAISLSELINS 191
BLAST of mRNA_H-paniculata_contig11303.837.1 vs. uniprot
Match: A0A151TAF5_CAJCA (Uncharacterized protein (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TAF5_CAJCA) HSP 1 Score: 49.3 bits (116), Expect = 8.290e-5 Identity = 29/105 (27.62%), Postives = 53/105 (50.48%), Query Frame = 1 Query: 1 MVIDGSPSGAWSIFEDWFRDTTSGARA---RVRTEFENLAVQPNETLNEFLARSFIIVERMKEIGVDMTETEVHHQIVRSLPHRFAIAKHMMLMTTNLSRKDLDE 306 ++ + W + ++ TT RA ++ EFE L + E++NE+ AR+ +IV +MK G D +T V +I+RS+ +F + + + S +DE Sbjct: 34 IINKDTSKNIWDSMKQKYQGTTHVKRAYLQALQNEFEVLHMTEGESVNEYFARTLVIVSKMKANGEDKGDTAVVEKILRSMTPKFNYVVCSIEESKDTSTLSIDE 138
BLAST of mRNA_H-paniculata_contig11303.837.1 vs. uniprot
Match: UPI0010A9A121 (uncharacterized protein LOC108170365 n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0010A9A121) HSP 1 Score: 50.1 bits (118), Expect = 9.870e-5 Identity = 30/104 (28.85%), Postives = 53/104 (50.96%), Query Frame = 1 Query: 25 GAWSIFEDWFRDTTSGARAR---VRTEFENLAVQPNETLNEFLARSFIIVERMKEIGVDMTETEVHHQIVRSLPHRFAIAKHMMLMTTNLSRKDLDEGVRTAKL 327 GAW I FR + +R +FE L + E+L+++LAR F IV +K +G D+TE + +++ SL R ++ T +L ++E + + K+ Sbjct: 82 GAWDILRREFRGDKKVRAVKLQAIRADFEYLRMNDVESLDDYLARFFEIVNNLKSLGEDVTEKRIVQKLLMSLSRRNKSIVSIIEETRDLDTIRVEEVLASVKV 185 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11303.837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11303.837.1 >prot_H-paniculata_contig11303.837.1 ID=prot_H-paniculata_contig11303.837.1|Name=mRNA_H-paniculata_contig11303.837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp MVIDGSPSGAWSIFEDWFRDTTSGARARVRTEFENLAVQPNETLNEFLARback to top mRNA from alignment at H-paniculata_contig11303:7635..7967+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11303.837.1 ID=mRNA_H-paniculata_contig11303.837.1|Name=mRNA_H-paniculata_contig11303.837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=333bp|location=Sequence derived from alignment at H-paniculata_contig11303:7635..7967+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11303:7635..7967+ >mRNA_H-paniculata_contig11303.837.1 ID=mRNA_H-paniculata_contig11303.837.1|Name=mRNA_H-paniculata_contig11303.837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at H-paniculata_contig11303:7635..7967+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |