prot_H-paniculata_contig309.8365.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig309.8365.1
Unique Nameprot_H-paniculata_contig309.8365.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length380
Homology
BLAST of mRNA_H-paniculata_contig309.8365.1 vs. uniprot
Match: A0A6H5L7M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7M4_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 6.250e-59
Identity = 128/337 (37.98%), Postives = 181/337 (53.71%), Query Frame = 0
Query:   72 CTAEDTNQALEASSTYIECAEINYADFMALVQADLGLMEGAALCFASSVEEMENGLEPLGDAHSVG------------LVDLFERCIHQLEVSDGTAPTKATADFLRKMLGPESKICSCLPDYVDGMPLCEQWNRFHHFGQRVEMICQPILENAAKLPQIVEEKVEEASGATSAQAANVGPE--GSQNQPATATTPEVETTEESQRIIPP----------------PSFPNQGPPCPPGKEQHPTDPTKCQGPSKDSEFYEDSFGGDESRGPPQEGGILGLAVPALGVIALGSLFAVGGVWLYGKFQSGTRQPGVRYMATGVENDMGTELGPFGRDY 378
            CT   T  AL+A++ Y++CA ++YADF ALV AD+ ++E AA CF +  +E+   + P  D  S              L   F+ C+ + E  D  A ++AT  FL KML  ES IC+CLP ++  MP C  W R+H  G+ V+ +C  I +    +  + +  + E          +V PE   SQ+    A  P  +T +                        P  PN   PCPPG+E HP+DP  CQ PS +SE Y+    GD      + GG++ L +  +GV+A+G +  VGG+W +GKFQSGTRQPGVRYMATG++N++GTELGPFGR Y
Sbjct:   91 CTQTQTQAALKATANYVKCAFLDYADFQALVHADVSILEDAAACFKTKADEIAEEIPPPDDNMSEDEVKALEKETAEKLATAFQECVKEAEAEDEEA-SQATVQFLEKMLAEESTICACLPPFLIKMPSCGPWIRYHDVGEIVQNVCDFIDDGNNTV--VADMDIAEV---------DVTPEERDSQDNATVAVLPAEDTKKLEXXXXXXXXXXXEAGIXXXXXRRPRLPNTFGPCPPGQEVHPSDPKACQ-PSLNSEEYQGEEFGDGRDSRREGGGMISLGLSVIGVVAVGGVXXVGGLWAWGKFQSGTRQPGVRYMATGLDNNIGTELGPFGRQY 414          
BLAST of mRNA_H-paniculata_contig309.8365.1 vs. uniprot
Match: D8LR88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR88_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 7.280e-53
Identity = 122/338 (36.09%), Postives = 169/338 (50.00%), Query Frame = 0
Query:   72 CTAEDTNQALEASSTYIECAEINYADFMALVQADLGLMEGAALCFASSVEEMENGLEPLGDAHSVG------------LVDLFERCIHQLEVSDGTAPTKATADFLRKMLGPESKICSCLPDYVDGMPLCEQWNRFHHFGQRVEMICQPILENAAKLPQIVEEKVEEASGATSAQAANVGPEGSQNQPATATTPEVETTEESQRIIP-------------------PPSFPNQGPPCPPGKEQHPTDPTKCQGPSKDSEFYEDSFGGDESRGPPQEGGILGLAVPALGVIALGSLFAVGGVWLYGKFQSGTRQPGVRYMATGVENDMGTELGPFGRDY 378
            CT   T  AL+A++ Y++CA ++YADF ALV AD+ ++E AA CF +  +E+   + P  D  S              L   F+ C+ + E  D  A ++AT  FL K+L  ES IC+CL  ++  MP C  W R+H  G+ V+ +        A++    EEK                   SQ+    A  P   T +                          P   PN   PCPPG+E HP+DP  CQ PS +SE Y+    GD   G  + GG++ L +  +GV+A+G        W +GKFQSGTRQPGVRYMATG++N++GTELGPFGR Y
Sbjct:   91 CTQTQTQAALKATANYVKCAFLDYADFQALVHADVAILEDAAACFKTKADEIAEEIPPPDDNMSEEEVKALEQETAEKLATAFQECVKEAEAGDEEA-SQATVQFLEKLLAEESTICACLSPFLIKMPTCGPWIRYHDVGKIVQNVL------VAEVDLTPEEK------------------DSQDDAIVAVLPAENTKKLXXXXXXXXXXXXXXXXXXXXXXXEHPAHLPNAFGPCPPGQEAHPSDPKACQ-PSMNSEEYQGEEFGDGRDGRREGGGMISLGLSVMGVVAVGXXXXXXXXWAWGKFQSGTRQPGVRYMATGLDNNIGTELGPFGRQY 402          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig309.8365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7M4_9PHAE6.250e-5937.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR88_ECTSI7.280e-5336.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..318
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 345..379
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 319..344
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.804
NoneNo IPR availableTMHMMTMhelixcoord: 322..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig309contigH-paniculata_contig309:27387..39079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig309.8365.1mRNA_H-paniculata_contig309.8365.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig309 27136..39434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig309.8365.1 ID=prot_H-paniculata_contig309.8365.1|Name=mRNA_H-paniculata_contig309.8365.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=380bp
MVRLSVIWVLAHLGAQVAIAANDTHGGEQHGRPQGGEGNRDHEHGQDHEH
GQDGWGRDHGHRDGDHGPPPTCTAEDTNQALEASSTYIECAEINYADFMA
LVQADLGLMEGAALCFASSVEEMENGLEPLGDAHSVGLVDLFERCIHQLE
VSDGTAPTKATADFLRKMLGPESKICSCLPDYVDGMPLCEQWNRFHHFGQ
RVEMICQPILENAAKLPQIVEEKVEEASGATSAQAANVGPEGSQNQPATA
TTPEVETTEESQRIIPPPSFPNQGPPCPPGKEQHPTDPTKCQGPSKDSEF
YEDSFGGDESRGPPQEGGILGLAVPALGVIALGSLFAVGGVWLYGKFQSG
TRQPGVRYMATGVENDMGTELGPFGRDYP*
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