prot_H-paniculata_contig11301.836.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11301.836.1
Unique Nameprot_H-paniculata_contig11301.836.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length147
Homology
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: D8LTD3_ECTSI (Glutamyl tRNA amidotransferase, subunit A, n-terminal region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTD3_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 3.040e-55
Identity = 100/137 (72.99%), Postives = 111/137 (81.02%), Query Frame = 0
Query:   11 VSMMAGSPTLLGAADGVRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 147
            +SM  G   LL AA+ VRSG VSSEELV +ALKRL+E E +VGAFLSVQGRAA+DTAR IDRKV+EGCKETLALPLLGVP+GVKDNLCTAGV TTA SRILEGY PSYDA AVSKLK AGGI + K  +    +G T
Sbjct:    1 MSMSTGPSPLLEAAEAVRSGRVSSEELVTQALKRLEEVEGDVGAFLSVQGRAAVDTARSIDRKVAEGCKETLALPLLGVPMGVKDNLCTAGVPTTAASRILEGYRPSYDASAVSKLKLAGGIALGKTNMDEYGMGST 137          
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A6H5KXC5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC5_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.710e-53
Identity = 100/137 (72.99%), Postives = 111/137 (81.02%), Query Frame = 0
Query:   11 VSMMAGSPTLLGAADGVRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 147
            +SM  G   LL AA+ VRSG +SSEELV +ALKRL+E E +VGAFLSVQGRAA+DTAR IDRKV+EGCKETLALPLLGVPLGVKDNLCTAGV TTA SRILEGY PSYDA AVSKLK AGGI + K  +    +G T
Sbjct:   48 MSMTTGPSPLLEAAEAVRSGRISSEELVTQALKRLEEVEGDVGAFLSVQGRAAVDTARSIDRKVAEGCKETLALPLLGVPLGVKDNLCTAGVPTTAASRILEGYRPSYDASAVSKLKLAGGIALGKTNMDEYGMGST 184          
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A836CQP8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQP8_9STRA)

HSP 1 Score: 130 bits (328), Expect = 5.660e-33
Identity = 69/121 (57.02%), Postives = 87/121 (71.90%), Query Frame = 0
Query:   27 VRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 147
            V+SG  S+E LV E+L R+   + +V A+LSVQG AA++ AR ID  V+ G   TLA PLLG+P+ VKDNLCT GV TTA S+ILEGY+PSYDA AV KL+EAG I+V KV +    +G T
Sbjct:   19 VKSGQRSAESLVQESLDRIAAADGKVAAYLSVQGEAALEAARVIDNAVAAGDAATLAKPLLGLPVAVKDNLCTQGVPTTAASKILEGYVPSYDATAVRKLREAGAIIVGKVNMDEFAMGST 139          
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A7S3Y278_HETAK (Glutaminyl-tRNA synthase (glutamine-hydrolyzing) (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y278_HETAK)

HSP 1 Score: 117 bits (294), Expect = 6.510e-28
Identity = 60/128 (46.88%), Postives = 89/128 (69.53%), Query Frame = 0
Query:   20 LLGAADGVRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 147
            LL A + +++  +++ EL+   L++++ET+  VGAFLSV G  A+  A E+D K++ G  E  A PLLG+P+ VKDNLC AG  TTA S++LEGYLP+Y A+AV++L+ AG IVV KV +    +G +
Sbjct:   43 LLDAVNAIKNKQMTATELMRSTLEKIEETDGHVGAFLSVFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMGAS 170          
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: W7TRV8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRV8_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.310e-24
Identity = 49/121 (40.50%), Postives = 82/121 (67.77%), Query Frame = 0
Query:   27 VRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 147
            ++ G +S  E+  + L +++  +  +GAFL++ G  A+  AR +D K++     T  +PLLG+P+ +KDN+CTAG+ TTAGS++L+GY+PSYDA AV++L+ AG ++V K  +    +G T
Sbjct:   57 IQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGST 177          
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A4D9D4K8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4K8_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.260e-24
Identity = 49/121 (40.50%), Postives = 83/121 (68.60%), Query Frame = 0
Query:   27 VRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 147
            ++ G +S  E+  ++L +++  +  +GAFL++ G  A+  AR +D K++     T  +PLLG+P+ +KDN+CTAG+ TTAGS++L+GY+PSYDA AV++L+ AG ++V K  +    +G T
Sbjct:   57 IQQGQISVAEVTKQSLLQIEAQDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPVAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGST 177          
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A7K0JSD8_9ACTN (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A (Fragment) n=1 Tax=Acidiferrimicrobium australe TaxID=2664430 RepID=A0A7K0JSD8_9ACTN)

HSP 1 Score: 100 bits (249), Expect = 8.300e-24
Identity = 57/124 (45.97%), Postives = 76/124 (61.29%), Query Frame = 0
Query:   24 ADGVRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 147
            A  VRSG   + E++ E L R+ E + E+ AFL+V G AA + A  +D  V+ G       PL GVP+ +KDNLCT GV+TT GSRILEG+LP YDA  V +L  AG +VV K  +    +G +
Sbjct:    9 AAAVRSGERPALEVLDEHLARIGERDGELHAFLAVTGDAAREAAARVDAAVAAGLDPG---PLAGVPIALKDNLCTRGVATTCGSRILEGWLPPYDATVVGRLAAAGAVVVGKTNLDEFAMGSS 129          
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: K0ILQ1_NITGG (Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) TaxID=1237085 RepID=K0ILQ1_NITGG)

HSP 1 Score: 105 bits (261), Expect = 1.190e-23
Identity = 55/124 (44.35%), Postives = 81/124 (65.32%), Query Frame = 0
Query:   24 ADGVRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 147
            A GV+S   S+EE + + L+R+++ E +V AF++V  + AID AR ID+KV +G +   A  L GV + VKDN+CT G+ TT  SR+LE Y+P YDA  V +L++AG IV+ K  +    +G T
Sbjct:   13 AAGVKSREFSAEEYIYQLLERIEKVEPKVNAFVTVNNKEAIDRARAIDKKVRDGEQ---AGALAGVAVSVKDNICTKGIKTTCASRMLEAYVPPYDATVVKRLQDAGAIVIGKANLDEFAMGST 133          
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A8J9RQB8_9CHLO (Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RQB8_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 1.310e-23
Identity = 54/121 (44.63%), Postives = 82/121 (67.77%), Query Frame = 0
Query:   27 VRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 147
            +RS + S+ E+  + LK+L+  E +V +F++V   +A  +AR++D  +S     +L  PL GVPLG+KD LCTAG+ TTAG+R+L+GY+PSYDA +V++LK AG I+V K       +G T
Sbjct:  112 LRSKSRSAVEITEQYLKQLEAAEPQVRSFITVAAESARTSARQLDETISREGTSSLG-PLAGVPLGIKDTLCTAGMETTAGARVLKGYVPSYDATSVARLKAAGAIIVGKANCDAFAMGST 231          
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A3E0KQV9_9FIRM (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A3E0KQV9_9FIRM)

HSP 1 Score: 98.6 bits (244), Expect = 1.460e-23
Identity = 52/124 (41.94%), Postives = 73/124 (58.87%), Query Frame = 0
Query:   24 ADGVRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 147
            A+ VR G + +EE+    L R+   +  + AFL V G AA+  AREID  V  G       PL GVP+ VKDN+CT GV TTA SR+L+G++P YDA  + +L  AG I++ K  +    +G +
Sbjct:   15 AEAVRRGRLRAEEVTRAHLDRIAAVDGRIRAFLHVTGEAALARAREIDEAVRRGADPG---PLAGVPVAVKDNICTRGVPTTAASRMLQGFVPPYDATVIERLNAAGAIIIGKTNLDEFAMGSS 135          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD3_ECTSI3.040e-5572.99Glutamyl tRNA amidotransferase, subunit A, n-termi... [more]
A0A6H5KXC5_9PHAE1.710e-5372.99Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A836CQP8_9STRA5.660e-3357.02Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A7S3Y278_HETAK6.510e-2846.88Glutaminyl-tRNA synthase (glutamine-hydrolyzing) (... [more]
W7TRV8_9STRA2.310e-2440.50Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A4D9D4K8_9STRA3.260e-2440.50Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A7K0JSD8_9ACTN8.300e-2445.97Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCA... [more]
K0ILQ1_NITGG1.190e-2344.35Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 ... [more]
A0A8J9RQB8_9CHLO1.310e-2344.63Glutamyl-tRNA(Gln) amidotransferase subunit A, chl... [more]
A0A3E0KQV9_9FIRM1.460e-2341.94Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036928Amidase signature (AS) superfamilyGENE3D3.90.1300.10coord: 18..147
e-value: 1.6E-29
score: 105.4
IPR036928Amidase signature (AS) superfamilySUPERFAMILY75304Amidase signature (AS) enzymescoord: 19..136
IPR023631Amidase signature domainPFAMPF01425Amidasecoord: 36..136
e-value: 1.3E-21
score: 77.1
NoneNo IPR availablePANTHERPTHR11895:SF151coord: 17..137
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..147
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
IPR000120AmidasePANTHERPTHR11895AMIDASEcoord: 17..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11301contigH-paniculata_contig11301:4038..8088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11301.836.1mRNA_H-paniculata_contig11301.836.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11301 4038..8088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11301.836.1 ID=prot_H-paniculata_contig11301.836.1|Name=mRNA_H-paniculata_contig11301.836.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
ATAAAAAAASVSMMAGSPTLLGAADGVRSGTVSSEELVVEALKRLDETEA
EVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTA
GVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036928AS_sf
IPR023631Amidase_dom
IPR000120Amidase