mRNA_H-paniculata_contig309.8362.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig309.8362.1 vs. uniprot
Match: D8LR91_ECTSI (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR91_ECTSI) HSP 1 Score: 344 bits (883), Expect = 7.750e-109 Identity = 179/240 (74.58%), Postives = 200/240 (83.33%), Query Frame = 3
Query: 651 AGQHIFARGTGAGKRVQSNMGAKNHGVVLADADRNAAVNAIVGAAFGAAGQRCMALSVVVLVGEAREWISDIAAGASRLNVGAGWLDGTDVGPMISRDALNRAERLIQESADAGVDVVLDGRGIKVTGYEEGNFLGPTILAG-ETRPGIPAYDEEVFGPVLCCVGVDTLEEAIALVNSCQYGNGTAIFTRSGAAARKFQRDVTVGQVGINVPIXXXXPFFSFTGSHGSFRGDINFYGKQV 1367
AG+HIFARGT AGKRVQSNMGAKNH VVL DA+R+AAV+A++GA+FGAAGQRCMALSV VLVGEA W DI GAS L VG GW +G DVGPMI+R+A RAERL+QES DAG DVVLDGRG+ V GYE GNF+GPTIL+G + PG+ AYD EVFGPVLC V V TLEEA+ LVNSC YGNGT+IFTRSGAAAR+FQR++ GQVGINVP XXXX FSFTGS SFRGDINFYGKQ
Sbjct: 238 AGEHIFARGTAAGKRVQSNMGAKNHVVVLPDAERDAAVSAVIGASFGAAGQRCMALSVAVLVGEAGGWAQDIVRGASALKVGPGWKEGVDVGPMITREARERAERLVQESQDAGADVVLDGRGVAVDGYESGNFVGPTILSGKQVGPGMSAYDSEVFGPVLCLVTVGTLEEAVGLVNSCSYGNGTSIFTRSGAAARRFQREIHAGQVGINVPXXXXXXXFSFTGSGASFRGDINFYGKQA 477
BLAST of mRNA_H-paniculata_contig309.8362.1 vs. uniprot
Match: A0A1Y1IVF8_KLENI (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVF8_KLENI) HSP 1 Score: 296 bits (759), Expect = 1.160e-89 Identity = 158/237 (66.67%), Postives = 186/237 (78.48%), Query Frame = 3
Query: 651 AGQHIFARGTGAGKRVQSNMGAKNHGVVLADADRNAAVNAIVGAAFGAAGQRCMALSVVVLVGEAREWISDIAAGASRLNVGAGWLDGTDVGPMISRDALNRAERLIQESADAGVDVVLDGRGIKVTGYEEGNFLGPTILAGETRPGIPAYDEEVFGPVLCCVGVDTLEEAIALVNSCQYGNGTAIFTRSGAAARKFQRDVTVGQVGINVPIXXXXPFFSFTGSHGSFRGDINFYGK 1361
AG+HI++RG GKRVQSNMGAKNH VVL DAD + A+NA+VGAAFGAAGQRCMA+S V VG + +W S +A A +L V AG G DVGP+IS +A RAERLI E + G +VLDGRG+KV GYEEGNFLGPTILA T P + Y EE+FGPVL C+ ++L++AI VN+ YGNGTAIFTRSGAAARKFQ ++ VGQVGINVPIXXXXPFFSFTG GSF+GD+NFYGK
Sbjct: 295 AGKHIYSRGCANGKRVQSNMGAKNHAVVLPDADPDRAMNALVGAAFGAAGQRCMAISSAVFVGGSEQWESGLAERAKKLKVNAGKEPGADVGPLISPEAKERAERLISEGVNQGARLVLDGRGVKVPGYEEGNFLGPTILADVT-PDMECYREEIFGPVLLCLKAESLDDAIQTVNNNPYGNGTAIFTRSGAAARKFQHEIDVGQVGINVPIXXXXPFFSFTGWRGSFQGDLNFYGK 530
BLAST of mRNA_H-paniculata_contig309.8362.1 vs. uniprot
Match: A0A835YMM3_9STRA (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMM3_9STRA) HSP 1 Score: 293 bits (749), Expect = 1.070e-88 Identity = 156/238 (65.55%), Postives = 185/238 (77.73%), Query Frame = 3
Query: 651 AGQHIFARGTGAGKRVQSNMGAKNHGVVLADADRNAAVNAIVGAAFGAAGQRCMALSVVVLVGEAREWISDIAAGASRLNVGAGWLDGTDVGPMISRDALNRAERLIQESADAGVDVVLDGRGIKVTGYEEGNFLGPTILAGETRPGIPAYDEEVFGPVLCCVGVDTLEEAIALVNSCQYGNGTAIFTRSGAAARKFQRDVTVGQVGINVPIXXXXPFFSFTGSHGSFRGDINFYGKQ 1364
AG+HI AR T GKRVQ+N+GAKNH V++ DADR AA+NA+VGAAFGAAGQRCMALSV V VGEA+E + DI A A L V G+ +G DVGPMI++ A RAERLIQE + G ++VLDGRG+K G+E+GNFLGPT+LAG T P PAY E+FGPVLCC V+TL++AIAL+N YGNGTAIFT+SGA ARKFQ ++ VGQVGIN XXXX FSFTGS SF G +FYGKQ
Sbjct: 251 AGEHIHARATANGKRVQANLGAKNHVVIMPDADREAALNAVVGAAFGAAGQRCMALSVAVFVGEAKELLGDIVAKAKTLKVTGGFEEGADVGPMITKGAKERAERLIQEGVNYGAELVLDGRGVKPKGFEQGNFLGPTVLAGVT-PANPAYTNEIFGPVLCCTCVNTLDQAIALINGNPYGNGTAIFTQSGAVARKFQYEIDVGQVGINXXXXXXXXMFSFTGSRRSFVGGQHFYGKQ 487
BLAST of mRNA_H-paniculata_contig309.8362.1 vs. uniprot
Match: A0A7S0RJ47_9CHLO (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=2 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RJ47_9CHLO) HSP 1 Score: 292 bits (748), Expect = 2.190e-88 Identity = 162/266 (60.90%), Postives = 192/266 (72.18%), Query Frame = 3
Query: 654 GQHIFARGTGAGKRVQSNMGAKNHGVVLADADRNAAVNAIVGAAFGAAGQRCMALSVVVLVGEAREWISDIAAGASRLNVGAGWLDGTDVGPMISRDALNRAERLIQESADAGVDVVLDGRGIKVTGYEEGNFLGPTILAGETRPGIPAYDEEVFGPVLCCVGVDTLEEAIALVNSCQYGNGTAIFTRSGAAARKFQRDVTVGQVGINVPIXXXXPFFSFTGSHGSFRGDINFYGKQVGKGNGEAHRFFCRIQHAVDVLQFERDAE 1451
G+H++ R + AGKRVQSNMGAKNH VVL+DA A NA+VGAAFGAAGQRCMA+S VLVG+A + +A A++L V G+ D+GPMISR AL RAE LIQ+ DAG VLDGRGIKV GYE GNFLGPTIL T P +P Y EE+FGPVL C+ V++L+EAIALVN YGNGTA+FT SG++ARKFQ+ + GQVGINVPI XX PFFSFTGS GSF GD NFYG Q G F+ +++ V L E DAE
Sbjct: 264 GRHVYNRASAAGKRVQSNMGAKNHAVVLSDAHAEATANALVGAAFGAAGQRCMAISAAVLVGDAARLVDVVAEKAAKLRVNGGFEPEADLGPMISRPALERAEALIQKGIDAGATCVLDGRGIKVPGYEAGNFLGPTILTNVT-PDMPCYTEEIFGPVLSCLTVESLDEAIALVNRNPYGNGTALFTSSGSSARKFQQHIDCGQVGINVPIPXXLPFFSFTGSRGSFLGDCNFYG-QAGV------NFYTQLK-TVTALWKEHDAE 520
BLAST of mRNA_H-paniculata_contig309.8362.1 vs. uniprot
Match: A0A4P9ZU52_9FUNG (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZU52_9FUNG) HSP 1 Score: 292 bits (748), Expect = 2.650e-88 Identity = 155/238 (65.13%), Postives = 183/238 (76.89%), Query Frame = 3
Query: 651 AGQHIFARGTGAGKRVQSNMGAKNHGVVLADADRNAAVNAIVGAAFGAAGQRCMALSVVVLVGEAREWISDIAAGASRLNVGAGWLDGTDVGPMISRDALNRAERLIQESADAGVDVVLDGRGIKVT-GYEEGNFLGPTILAGETRPGIPAYDEEVFGPVLCCVGVDTLEEAIALVNSCQYGNGTAIFTRSGAAARKFQRDVTVGQVGINVPIXXXXPFFSFTGSHGSFRGDINFYGK 1361
AG+HI+ RGT GKRVQ+N+GAKNHG+++ DADRN +N + GAAFGAAGQRCMALS VV VG +REWI DI A A L VG+G+ TDVGP+IS AL R LIQ D G +++LDGR + V G E+GNF+GPTIL G +P + Y EE+FGPVL C+ VDTL+EAIALVN +YGNGTAIFTRSGA ARKFQ +V VGQ+GINVP XXXX FSFTGS GSF GDINFYG+
Sbjct: 271 AGKHIYERGTRNGKRVQANLGAKNHGIIMPDADRNHTLNQLTGAAFGAAGQRCMALSTVVFVGSSREWIPDILARAQELKVGSGFDAQTDVGPVISPQALQRIHSLIQSGVDEGAELLLDGRQVTVAAGLEKGNFIGPTILTG-VKPHMKCYQEEIFGPVLVCLEVDTLDEAIALVNQNRYGNGTAIFTRSGATARKFQHEVDVGQIGINVPXXXXXXMFSFTGSRGSFLGDINFYGR 507
BLAST of mRNA_H-paniculata_contig309.8362.1 vs. uniprot
Match: A0A1Y2CGD6_9FUNG (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CGD6_9FUNG) HSP 1 Score: 289 bits (739), Expect = 3.680e-87 Identity = 151/237 (63.71%), Postives = 184/237 (77.64%), Query Frame = 3
Query: 651 AGQHIFARGTGAGKRVQSNMGAKNHGVVLADADRNAAVNAIVGAAFGAAGQRCMALSVVVLVGEAREWISDIAAGASRLNVGAGWLDGTDVGPMISRDALNRAERLIQESADAGVDVVLDGRGIKVTGYEEGNFLGPTILAGETRPGIPAYDEEVFGPVLCCVGVDTLEEAIALVNSCQYGNGTAIFTRSGAAARKFQRDVTVGQVGINVPIXXXXPFFSFTGSHGSFRGDINFYGK 1361
AG++IFARGT GKRVQ+N+GAKNHGV+L DA++N +N + GAAFGAAGQRCMALS VVLVGEA+ W+ ++ A L V +G+ + D+GPMIS +A RAE LIQ D G ++LDGRGIK G+E+GNFLGPTILAG +P + Y EE+FGPVL + DTL+EAI LVNS YGNGTA+FT SG+AAR+FQ ++ VGQVGINVP XXXX FSFTGS GS RGD+NFYGK
Sbjct: 256 AGKYIFARGTANGKRVQANLGAKNHGVILPDANKNYTLNQLTGAAFGAAGQRCMALSTVVLVGEAKNWLPELVERAKALKVSSGFDETADLGPMISPEATKRAEDLIQSGVDEGAQLLLDGRGIKPKGFEKGNFLGPTILAG-VKPHMKCYTEEIFGPVLVVLEADTLDEAIELVNSNPYGNGTALFTNSGSAARRFQDEIDVGQVGINVPXXXXXXMFSFTGSRGSIRGDLNFYGK 491
BLAST of mRNA_H-paniculata_contig309.8362.1 vs. uniprot
Match: A0A812ZSZ8_9DINO (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=2 Tax=Sar TaxID=2698737 RepID=A0A812ZSZ8_9DINO) HSP 1 Score: 290 bits (742), Expect = 5.240e-87 Identity = 158/266 (59.40%), Postives = 193/266 (72.56%), Query Frame = 3
Query: 651 AGQHIFARGTGAGKRVQSNMGAKNHGVVLADADRNAAVNAIVGAAFGAAGQRCMALSVVVLVGEAREWISDIAAGASRLNVGAGWLDGTDVGPMISRDALNRAERLIQESADAGVDVVLDGRGIKVTGYEEGNFLGPTILAGETRPGIPAYDEEVFGPVLCCVGVDTLEEAIALVNSCQYGNGTAIFTRSGAAARKFQRDVTVGQVGINVPIXXXXPFFSFTGSHGSFRGDINFYGKQVGKGNGEAHRFFCRIQHAVDVLQFERDA 1448
AG+HIF GT GKRVQSN+GAKNH V++ DADR A +NA+VGAAFGAAGQRCMALS+ V VGEA EWI +IA A+ L VGAG + TDVGPMI+ A RAE ++ + + G + LDGRG+KV G E G+F GPT+L G PG PAYDEE+F PV+ D+L++AIAL+N+ QYGNG AIFT+SGAAARKFQ +V VGQVGIN+P XXXX FSFTGS GS RGDINFYGK A +FF +++ F+ +A
Sbjct: 309 AGEHIFDLGTRHGKRVQSNLGAKNHAVIMPDADREATINALVGAAFGAAGQRCMALSMSVFVGEAAEWIPEIAERAAELKVGAGDKEDTDVGPMITPQARERAEAIVTAAVEQGATLALDGRGVKVPGCEGGDFFGPTVLTG-VEPGNPAYDEEIFAPVMSVTTRDSLDDAIALINANQYGNGCAIFTQSGAAARKFQHEVDVGQVGINLPXXXXXXMFSFTGSRGSIRGDINFYGKG-------AIQFFTQVKTVTSNWNFKVNA 566
BLAST of mRNA_H-paniculata_contig309.8362.1 vs. uniprot
Match: B7GBU6_PHATC (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GBU6_PHATC) HSP 1 Score: 288 bits (737), Expect = 1.000e-86 Identity = 151/237 (63.71%), Postives = 180/237 (75.95%), Query Frame = 3
Query: 651 AGQHIFARGTGAGKRVQSNMGAKNHGVVLADADRNAAVNAIVGAAFGAAGQRCMALSVVVLVGEAREWISDIAAGASRLNVGAGWLDGTDVGPMISRDALNRAERLIQESADAGVDVVLDGRGIKVTGYEEGNFLGPTILAGETRPGIPAYDEEVFGPVLCCVGVDTLEEAIALVNSCQYGNGTAIFTRSGAAARKFQRDVTVGQVGINVPIXXXXPFFSFTGSHGSFRGDINFYGK 1361
AG++IF +GT GKRVQSNMGAKNH VVL DADR A V A+VGAAFGAAGQRCMALS ++LVGEA++W+SDI A++L+VGAGW DG DVGP+I+ DA NR +I S D G ++ LDGR + V Y GNFLGPT+L+ T I Y EE+FGPVL C+ +LEEA+ +VNS YGNG AIFT SGAAARKF R++ GQVGINVP XXXX FSFTG+ S RGD+NFYGK
Sbjct: 268 AGEYIFQQGTAHGKRVQSNMGAKNHAVVLPDADRGATVRALVGAAFGAAGQRCMALSTLILVGEAQDWLSDIVEEAAKLSVGAGWEDGVDVGPLITHDAKNRVLDIIHRSIDQGAEIPLDGRDVHVNEYSTGNFLGPTVLSKITPSNI-GYQEEIFGPVLACLEAKSLEEAMQIVNSNPYGNGCAIFTASGAAARKFTREIQAGQVGINVPXXXXXXMFSFTGNKASIRGDLNFYGK 503
BLAST of mRNA_H-paniculata_contig309.8362.1 vs. uniprot
Match: A0A7S4N6T6_9EUKA (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4N6T6_9EUKA) HSP 1 Score: 284 bits (727), Expect = 3.480e-86 Identity = 151/237 (63.71%), Postives = 178/237 (75.11%), Query Frame = 3
Query: 651 AGQHIFARGTGAGKRVQSNMGAKNHGVVLADADRNAAVNAIVGAAFGAAGQRCMALSVVVLVGEAREWISDIAAGASRLNVGAGWLDGTDVGPMISRDALNRAERLIQESADAGVDVVLDGRGIKVTGYEEGNFLGPTILAGETRPGIPAYDEEVFGPVLCCVGVDTLEEAIALVNSCQYGNGTAIFTRSGAAARKFQRDVTVGQVGINVPIXXXXPFFSFTGSHGSFRGDINFYGK 1361
AG+HI ARGT GKRVQSNM AKNH V+L DADR A+N++VGAAFGAAGQRCMALS V VGE+ EWI +I A AS+L V AGW +G D+GPMIS A RAERLI E G + +LDGRG+KV Y GNFLGPT+L G +P + Y EE+FGP L C+ V +LE+AI L+N+ +GNGTAIFT+SGAAAR F+R+V VGQVG+N XXXX FFSFTGS SF G NFYGK
Sbjct: 187 AGRHIHARGTANGKRVQSNMAAKNHAVILPDADREHAINSLVGAAFGAAGQRCMALSTAVFVGESEEWIDEIVARASKLVVNAGWEEGADLGPMISPVAKERAERLIAEGIADGAECLLDGRGVKVEKYPNGNFLGPTLLKG-VQPHMSCYTEEIFGPALVCLSVPSLEDAIQLINNNPFGNGTAIFTKSGAAARVFEREVDVGQVGVNXXXXXXXXFFSFTGSRASFLGSTNFYGK 422
BLAST of mRNA_H-paniculata_contig309.8362.1 vs. uniprot
Match: A0A139A7R4_GONPJ (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=2 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A7R4_GONPJ) HSP 1 Score: 286 bits (733), Expect = 3.600e-86 Identity = 151/237 (63.71%), Postives = 183/237 (77.22%), Query Frame = 3
Query: 651 AGQHIFARGTGAGKRVQSNMGAKNHGVVLADADRNAAVNAIVGAAFGAAGQRCMALSVVVLVGEAREWISDIAAGASRLNVGAGWLDGTDVGPMISRDALNRAERLIQESADAGVDVVLDGRGIKVTGYEEGNFLGPTILAGETRPGIPAYDEEVFGPVLCCVGVDTLEEAIALVNSCQYGNGTAIFTRSGAAARKFQRDVTVGQVGINVPIXXXXPFFSFTGSHGSFRGDINFYGK 1361
AGQ+I+ARG GKRVQSNMGAKNHGVV+ DA++N +N +VGAAFGAAGQRCMALS V VGE++EWI ++ A++LNVG G DVGPMIS AL+RA+RLIQ D G +++LDGR I V G+E+GNFLGPTIL+G +P + Y EE+F PVL + DTL++AI L+N+ YGNGTAIFT SGA ARKFQ ++ VGQVGINVP XXXX FSFTGS GS GD+NFYGK
Sbjct: 265 AGQYIYARGNANGKRVQSNMGAKNHGVVVPDANKNHTLNQLVGAAFGAAGQRCMALSTAVFVGESQEWIPELVERATKLNVGHGMDPKADVGPMISPQALDRAKRLIQSGVDEGAELLLDGRNIVVQGFEKGNFLGPTILSG-VKPSMECYKEEIFAPVLVILKADTLDQAIELINANPYGNGTAIFTTSGAIARKFQNEIDVGQVGINVPXXXXXXMFSFTGSRGSMWGDLNFYGK 500 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig309.8362.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig309.8362.1 >prot_H-paniculata_contig309.8362.1 ID=prot_H-paniculata_contig309.8362.1|Name=mRNA_H-paniculata_contig309.8362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=266bp MGAKNHGVVLADADRNAAVNAIVGAAFGAAGQRCMALSVVVLVGEAREWIback to top mRNA from alignment at H-paniculata_contig309:3579..11095+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig309.8362.1 ID=mRNA_H-paniculata_contig309.8362.1|Name=mRNA_H-paniculata_contig309.8362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7517bp|location=Sequence derived from alignment at H-paniculata_contig309:3579..11095+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig309:3579..11095+ >mRNA_H-paniculata_contig309.8362.1 ID=mRNA_H-paniculata_contig309.8362.1|Name=mRNA_H-paniculata_contig309.8362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1596bp|location=Sequence derived from alignment at H-paniculata_contig309:3579..11095+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |