mRNA_H-paniculata_contig309.8361.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig309.8361.1 vs. uniprot
Match: A0A6H5L661_9PHAE (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L661_9PHAE) HSP 1 Score: 243 bits (620), Expect = 2.790e-75 Identity = 115/131 (87.79%), Postives = 121/131 (92.37%), Query Frame = 2
Query: 2 ARGDVFRGLEVVEQACGAGVAMMGETLGGVANAVDTYSYREPLGVCAGICPFNFPAMIPLWMFPLAVSVGNTFVMKPSEKDPGAAMLLADMAKEAGLPDGVLNIIHGGREAVDFLCDAPDIKAISFVGGNQ 394
ARGDVFRGLEVVEQACG G AMMGETLGGVA +DTYSYREPLGVCAGICPFNFPAMIPLWMFPLA++ GNTFVMKPSEK PGAAM LA MA EAGLPDGVLN+IHGG EAVDF+CD+PDIKAISFVGGNQ
Sbjct: 146 ARGDVFRGLEVVEQACGVGAAMMGETLGGVAAGMDTYSYREPLGVCAGICPFNFPAMIPLWMFPLAIAAGNTFVMKPSEKCPGAAMKLASMASEAGLPDGVLNVIHGGHEAVDFVCDSPDIKAISFVGGNQ 276
BLAST of mRNA_H-paniculata_contig309.8361.1 vs. uniprot
Match: D8LR91_ECTSI (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR91_ECTSI) HSP 1 Score: 242 bits (618), Expect = 4.910e-75 Identity = 114/131 (87.02%), Postives = 121/131 (92.37%), Query Frame = 2
Query: 2 ARGDVFRGLEVVEQACGAGVAMMGETLGGVANAVDTYSYREPLGVCAGICPFNFPAMIPLWMFPLAVSVGNTFVMKPSEKDPGAAMLLADMAKEAGLPDGVLNIIHGGREAVDFLCDAPDIKAISFVGGNQ 394
ARGDVFRGLEVVEQACG G AMMGETLGGVA +DTYSYREP+GVCAGICPFNFPAMIPLWMFPLA++ GNTFVMKPSEK PGAAM LA MA EAGLPDGVLN+IHGG EAVDF+CD+PDIKAISFVGGNQ
Sbjct: 107 ARGDVFRGLEVVEQACGVGAAMMGETLGGVAAGMDTYSYREPIGVCAGICPFNFPAMIPLWMFPLAIAAGNTFVMKPSEKCPGAAMKLASMASEAGLPDGVLNVIHGGHEAVDFVCDSPDIKAISFVGGNQ 237
BLAST of mRNA_H-paniculata_contig309.8361.1 vs. uniprot
Match: A0A067BI88_SAPPC (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BI88_SAPPC) HSP 1 Score: 224 bits (570), Expect = 1.060e-67 Identity = 98/130 (75.38%), Postives = 121/130 (93.08%), Query Frame = 2
Query: 2 ARGDVFRGLEVVEQACGAGVAMMGETLGGVANAVDTYSYREPLGVCAGICPFNFPAMIPLWMFPLAVSVGNTFVMKPSEKDPGAAMLLADMAKEAGLPDGVLNIIHGGREAVDFLCDAPDIKAISFVGGN 391
ARGDVFRGLE+VE +CG G MMGETLG +AN++DTYSY++PLGVCAGICPFNFPAMIPLWMFP+ ++ GNT+++KPSEKDPGAAM+LA +A+EAG+PDGVLN+IHG ++AV+F+CDAP+IKAISFVGGN
Sbjct: 120 ARGDVFRGLEIVEASCGIGNHMMGETLGNLANSLDTYSYKQPLGVCAGICPFNFPAMIPLWMFPVGITTGNTYILKPSEKDPGAAMILAKLAQEAGVPDGVLNVIHGAKDAVNFICDAPEIKAISFVGGN 249
BLAST of mRNA_H-paniculata_contig309.8361.1 vs. uniprot
Match: A0A8K1C6V8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6V8_PYTOL) HSP 1 Score: 221 bits (562), Expect = 1.920e-66 Identity = 100/131 (76.34%), Postives = 118/131 (90.08%), Query Frame = 2
Query: 2 ARGDVFRGLEVVEQACGAGVAMMGETLGGVANAVDTYSYREPLGVCAGICPFNFPAMIPLWMFPLAVSVGNTFVMKPSEKDPGAAMLLADMAKEAGLPDGVLNIIHGGREAVDFLCDAPDIKAISFVGGNQ 394
A+GD+FRGLEVVE AC A MMGET+ +A+A+DTYSY++PLGVCAGICPFNFPAMIPLWMFP+ + GNT+V+KPSEKDPGAAM+LA +AKEAGLPDGVLNIIHG +AV+F+CDAP+IKAISFVGGNQ
Sbjct: 127 AKGDIFRGLEVVEHACSASSLMMGETVENLASALDTYSYKQPLGVCAGICPFNFPAMIPLWMFPIGIVAGNTYVLKPSEKDPGAAMILARLAKEAGLPDGVLNIIHGAHDAVNFICDAPEIKAISFVGGNQ 257
BLAST of mRNA_H-paniculata_contig309.8361.1 vs. uniprot
Match: K3WWN5_GLOUD (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WWN5_GLOUD) HSP 1 Score: 221 bits (562), Expect = 1.960e-66 Identity = 100/131 (76.34%), Postives = 117/131 (89.31%), Query Frame = 2
Query: 2 ARGDVFRGLEVVEQACGAGVAMMGETLGGVANAVDTYSYREPLGVCAGICPFNFPAMIPLWMFPLAVSVGNTFVMKPSEKDPGAAMLLADMAKEAGLPDGVLNIIHGGREAVDFLCDAPDIKAISFVGGNQ 394
ARGD+FRGLEVVE CGA MMGET +AN++DTYSY++PLGVCAGICPFNFPAMIPLWMFP+ V GNT+V+KPSEKDPGA+M+LA +A+EAGLPDGVLNIIHG +AV+F+CDAP+IKAISFVGGNQ
Sbjct: 128 ARGDIFRGLEVVEHTCGAATLMMGETAENLANSLDTYSYKQPLGVCAGICPFNFPAMIPLWMFPVGVVAGNTYVLKPSEKDPGASMILARLAQEAGLPDGVLNIIHGAHDAVNFICDAPEIKAISFVGGNQ 258
BLAST of mRNA_H-paniculata_contig309.8361.1 vs. uniprot
Match: A0A485L093_9STRA (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A485L093_9STRA) HSP 1 Score: 219 bits (559), Expect = 4.890e-66 Identity = 97/130 (74.62%), Postives = 120/130 (92.31%), Query Frame = 2
Query: 2 ARGDVFRGLEVVEQACGAGVAMMGETLGGVANAVDTYSYREPLGVCAGICPFNFPAMIPLWMFPLAVSVGNTFVMKPSEKDPGAAMLLADMAKEAGLPDGVLNIIHGGREAVDFLCDAPDIKAISFVGGN 391
A+GDVFRGLE+VE ACG G +MGETLG +AN++DTYSY++PLGVCAGICPFNFPAMIPLWMFP+ ++ GNT+V+KPSEKDPGA+M+LA +AKEAG+P+GVLNIIHG +AV+F+CDAP+I+AISFVGGN
Sbjct: 121 AKGDVFRGLEIVESACGIGNHLMGETLGNLANSLDTYSYKQPLGVCAGICPFNFPAMIPLWMFPVGITCGNTYVLKPSEKDPGASMILARLAKEAGVPNGVLNIIHGAHDAVNFICDAPEIRAISFVGGN 250
BLAST of mRNA_H-paniculata_contig309.8361.1 vs. uniprot
Match: F0W1D3_9STRA (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W1D3_9STRA) HSP 1 Score: 216 bits (550), Expect = 9.930e-65 Identity = 99/131 (75.57%), Postives = 115/131 (87.79%), Query Frame = 2
Query: 2 ARGDVFRGLEVVEQACGAGVAMMGETLGGVANAVDTYSYREPLGVCAGICPFNFPAMIPLWMFPLAVSVGNTFVMKPSEKDPGAAMLLADMAKEAGLPDGVLNIIHGGREAVDFLCDAPDIKAISFVGGNQ 394
A+GD+ RGLEV+E ACGA MMGETL +AN +DTYSYR+PLGVCAGICPFNFPAMIPLWM PL + GNTFV+KPSEKDPGA M+LA +AKEAGLP+GVLNIIHG R+ V+F+CDAP+IKAISFVGGN+
Sbjct: 121 AKGDITRGLEVIEHACGAANLMMGETLENLANGLDTYSYRQPLGVCAGICPFNFPAMIPLWMLPLGIVSGNTFVLKPSEKDPGATMILARLAKEAGLPNGVLNIIHGSRDPVNFICDAPEIKAISFVGGNE 251
BLAST of mRNA_H-paniculata_contig309.8361.1 vs. uniprot
Match: A0A2D4BPI4_PYTIN (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPI4_PYTIN) HSP 1 Score: 216 bits (549), Expect = 1.780e-64 Identity = 96/131 (73.28%), Postives = 117/131 (89.31%), Query Frame = 2
Query: 2 ARGDVFRGLEVVEQACGAGVAMMGETLGGVANAVDTYSYREPLGVCAGICPFNFPAMIPLWMFPLAVSVGNTFVMKPSEKDPGAAMLLADMAKEAGLPDGVLNIIHGGREAVDFLCDAPDIKAISFVGGNQ 394
ARGD+FRGLEVVE AC A MMGET+ +A+++DTYS ++PLGVCAGICPFNFPAMIPLWMFP+ + GNT+++KPSEKDPGAAM+LA +AKEAG+PDGVLN+IHG +AV+F+CDAP+IKAISFVGGNQ
Sbjct: 130 ARGDIFRGLEVVEHACSAPTLMMGETVENLASSLDTYSLKQPLGVCAGICPFNFPAMIPLWMFPMGIVAGNTYILKPSEKDPGAAMILARLAKEAGVPDGVLNVIHGAHDAVNFICDAPEIKAISFVGGNQ 260
BLAST of mRNA_H-paniculata_contig309.8361.1 vs. uniprot
Match: H3G873_PHYRM (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=27 Tax=Peronosporaceae TaxID=4777 RepID=H3G873_PHYRM) HSP 1 Score: 214 bits (546), Expect = 3.890e-64 Identity = 98/131 (74.81%), Postives = 112/131 (85.50%), Query Frame = 2
Query: 2 ARGDVFRGLEVVEQACGAGVAMMGETLGGVANAVDTYSYREPLGVCAGICPFNFPAMIPLWMFPLAVSVGNTFVMKPSEKDPGAAMLLADMAKEAGLPDGVLNIIHGGREAVDFLCDAPDIKAISFVGGNQ 394
ARGDVFRGLEVVE CGA MMGET +A ++DTYSY++PLGVCAGICPFNFPAMIPLWMFP GNT+V+KPSEKDPGA M+LA +A+EAGLPDGVLNIIHG + V+F+CDAP+IKAISFVGGNQ
Sbjct: 120 ARGDVFRGLEVVEHTCGAATLMMGETAENLATSLDTYSYKQPLGVCAGICPFNFPAMIPLWMFPTGTVTGNTYVLKPSEKDPGATMILARLAQEAGLPDGVLNIIHGAHDTVNFICDAPEIKAISFVGGNQ 250
BLAST of mRNA_H-paniculata_contig309.8361.1 vs. uniprot
Match: A0A7S2WPV6_9STRA (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPV6_9STRA) HSP 1 Score: 215 bits (547), Expect = 6.580e-64 Identity = 95/130 (73.08%), Postives = 115/130 (88.46%), Query Frame = 2
Query: 2 ARGDVFRGLEVVEQACGAGVAMMGETLGGVANAVDTYSYREPLGVCAGICPFNFPAMIPLWMFPLAVSVGNTFVMKPSEKDPGAAMLLADMAKEAGLPDGVLNIIHGGREAVDFLCDAPDIKAISFVGGN 391
ARGDVFRGLEVVE AC ++ GETLG VA+ +D+YSY+EPLGVCAG+CPFNFPAMIPLWMFP+A++ GNTFV+KPSE+DPGAAM+L MA EAGLPDGVLN++HG + V+F+CDAP+IKAISFVGG+
Sbjct: 159 ARGDVFRGLEVVETACNVATSLQGETLGNVASGLDSYSYKEPLGVCAGVCPFNFPAMIPLWMFPVAIACGNTFVLKPSERDPGAAMMLVRMAHEAGLPDGVLNVVHGAHDTVNFICDAPEIKAISFVGGD 288 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig309.8361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig309.8361.1 >prot_H-paniculata_contig309.8361.1 ID=prot_H-paniculata_contig309.8361.1|Name=mRNA_H-paniculata_contig309.8361.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp MMGETLGGVANAVDTYSYREPLGVCAGICPFNFPAMIPLWMFPLAVSVGNback to top mRNA from alignment at H-paniculata_contig309:667..3361+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig309.8361.1 ID=mRNA_H-paniculata_contig309.8361.1|Name=mRNA_H-paniculata_contig309.8361.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2695bp|location=Sequence derived from alignment at H-paniculata_contig309:667..3361+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig309:667..3361+ >mRNA_H-paniculata_contig309.8361.1 ID=mRNA_H-paniculata_contig309.8361.1|Name=mRNA_H-paniculata_contig309.8361.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at H-paniculata_contig309:667..3361+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |