mRNA_H-paniculata_contig11301.836.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: D8LTD3_ECTSI (Glutamyl tRNA amidotransferase, subunit A, n-terminal region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTD3_ECTSI) HSP 1 Score: 186 bits (471), Expect = 3.040e-55 Identity = 100/137 (72.99%), Postives = 111/137 (81.02%), Query Frame = 1 Query: 31 VSMMAGSPTLLGAADGVRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 441 +SM G LL AA+ VRSG VSSEELV +ALKRL+E E +VGAFLSVQGRAA+DTAR IDRKV+EGCKETLALPLLGVP+GVKDNLCTAGV TTA SRILEGY PSYDA AVSKLK AGGI + K + +G T Sbjct: 1 MSMSTGPSPLLEAAEAVRSGRVSSEELVTQALKRLEEVEGDVGAFLSVQGRAAVDTARSIDRKVAEGCKETLALPLLGVPMGVKDNLCTAGVPTTAASRILEGYRPSYDASAVSKLKLAGGIALGKTNMDEYGMGST 137
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A6H5KXC5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC5_9PHAE) HSP 1 Score: 186 bits (472), Expect = 1.710e-53 Identity = 100/137 (72.99%), Postives = 111/137 (81.02%), Query Frame = 1 Query: 31 VSMMAGSPTLLGAADGVRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 441 +SM G LL AA+ VRSG +SSEELV +ALKRL+E E +VGAFLSVQGRAA+DTAR IDRKV+EGCKETLALPLLGVPLGVKDNLCTAGV TTA SRILEGY PSYDA AVSKLK AGGI + K + +G T Sbjct: 48 MSMTTGPSPLLEAAEAVRSGRISSEELVTQALKRLEEVEGDVGAFLSVQGRAAVDTARSIDRKVAEGCKETLALPLLGVPLGVKDNLCTAGVPTTAASRILEGYRPSYDASAVSKLKLAGGIALGKTNMDEYGMGST 184
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A836CQP8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQP8_9STRA) HSP 1 Score: 130 bits (328), Expect = 5.660e-33 Identity = 69/121 (57.02%), Postives = 87/121 (71.90%), Query Frame = 1 Query: 79 VRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 441 V+SG S+E LV E+L R+ + +V A+LSVQG AA++ AR ID V+ G TLA PLLG+P+ VKDNLCT GV TTA S+ILEGY+PSYDA AV KL+EAG I+V KV + +G T Sbjct: 19 VKSGQRSAESLVQESLDRIAAADGKVAAYLSVQGEAALEAARVIDNAVAAGDAATLAKPLLGLPVAVKDNLCTQGVPTTAASKILEGYVPSYDATAVRKLREAGAIIVGKVNMDEFAMGST 139
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A7S3Y278_HETAK (Glutaminyl-tRNA synthase (glutamine-hydrolyzing) (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y278_HETAK) HSP 1 Score: 117 bits (294), Expect = 6.510e-28 Identity = 60/128 (46.88%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 58 LLGAADGVRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 441 LL A + +++ +++ EL+ L++++ET+ VGAFLSV G A+ A E+D K++ G E A PLLG+P+ VKDNLC AG TTA S++LEGYLP+Y A+AV++L+ AG IVV KV + +G + Sbjct: 43 LLDAVNAIKNKQMTATELMRSTLEKIEETDGHVGAFLSVFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMGAS 170
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: W7TRV8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRV8_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.310e-24 Identity = 49/121 (40.50%), Postives = 82/121 (67.77%), Query Frame = 1 Query: 79 VRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 441 ++ G +S E+ + L +++ + +GAFL++ G A+ AR +D K++ T +PLLG+P+ +KDN+CTAG+ TTAGS++L+GY+PSYDA AV++L+ AG ++V K + +G T Sbjct: 57 IQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGST 177
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A4D9D4K8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4K8_9STRA) HSP 1 Score: 107 bits (267), Expect = 3.260e-24 Identity = 49/121 (40.50%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 79 VRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 441 ++ G +S E+ ++L +++ + +GAFL++ G A+ AR +D K++ T +PLLG+P+ +KDN+CTAG+ TTAGS++L+GY+PSYDA AV++L+ AG ++V K + +G T Sbjct: 57 IQQGQISVAEVTKQSLLQIEAQDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPVAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMGST 177
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A7K0JSD8_9ACTN (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A (Fragment) n=1 Tax=Acidiferrimicrobium australe TaxID=2664430 RepID=A0A7K0JSD8_9ACTN) HSP 1 Score: 100 bits (249), Expect = 8.300e-24 Identity = 57/124 (45.97%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 70 ADGVRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 441 A VRSG + E++ E L R+ E + E+ AFL+V G AA + A +D V+ G PL GVP+ +KDNLCT GV+TT GSRILEG+LP YDA V +L AG +VV K + +G + Sbjct: 9 AAAVRSGERPALEVLDEHLARIGERDGELHAFLAVTGDAAREAAARVDAAVAAGLDPG---PLAGVPIALKDNLCTRGVATTCGSRILEGWLPPYDATVVGRLAAAGAVVVGKTNLDEFAMGSS 129
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: K0ILQ1_NITGG (Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) TaxID=1237085 RepID=K0ILQ1_NITGG) HSP 1 Score: 105 bits (261), Expect = 1.190e-23 Identity = 55/124 (44.35%), Postives = 81/124 (65.32%), Query Frame = 1 Query: 70 ADGVRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 441 A GV+S S+EE + + L+R+++ E +V AF++V + AID AR ID+KV +G + A L GV + VKDN+CT G+ TT SR+LE Y+P YDA V +L++AG IV+ K + +G T Sbjct: 13 AAGVKSREFSAEEYIYQLLERIEKVEPKVNAFVTVNNKEAIDRARAIDKKVRDGEQ---AGALAGVAVSVKDNICTKGIKTTCASRMLEAYVPPYDATVVKRLQDAGAIVIGKANLDEFAMGST 133
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A8J9RQB8_9CHLO (Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RQB8_9CHLO) HSP 1 Score: 105 bits (262), Expect = 1.310e-23 Identity = 54/121 (44.63%), Postives = 82/121 (67.77%), Query Frame = 1 Query: 79 VRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 441 +RS + S+ E+ + LK+L+ E +V +F++V +A +AR++D +S +L PL GVPLG+KD LCTAG+ TTAG+R+L+GY+PSYDA +V++LK AG I+V K +G T Sbjct: 112 LRSKSRSAVEITEQYLKQLEAAEPQVRSFITVAAESARTSARQLDETISREGTSSLG-PLAGVPLGIKDTLCTAGMETTAGARVLKGYVPSYDATSVARLKAAGAIIVGKANCDAFAMGST 231
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Match: A0A3E0KQV9_9FIRM (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A3E0KQV9_9FIRM) HSP 1 Score: 98.6 bits (244), Expect = 1.460e-23 Identity = 52/124 (41.94%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 70 ADGVRSGTVSSEELVVEALKRLDETEAEVGAFLSVQGRAAIDTAREIDRKVSEGCKETLALPLLGVPLGVKDNLCTAGVSTTAGSRILEGYLPSYDAQAVSKLKEAGGIVVRKVIIHFGCLGGT 441 A+ VR G + +EE+ L R+ + + AFL V G AA+ AREID V G PL GVP+ VKDN+CT GV TTA SR+L+G++P YDA + +L AG I++ K + +G + Sbjct: 15 AEAVRRGRLRAEEVTRAHLDRIAAVDGRIRAFLHVTGEAALARAREIDEAVRRGADPG---PLAGVPVAVKDNICTRGVPTTAASRMLQGFVPPYDATVIERLNAAGAIIIGKTNLDEFAMGSS 135 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11301.836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11301.836.1 >prot_H-paniculata_contig11301.836.1 ID=prot_H-paniculata_contig11301.836.1|Name=mRNA_H-paniculata_contig11301.836.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp ATAAAAAAASVSMMAGSPTLLGAADGVRSGTVSSEELVVEALKRLDETEAback to top mRNA from alignment at H-paniculata_contig11301:4038..8088+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11301.836.1 ID=mRNA_H-paniculata_contig11301.836.1|Name=mRNA_H-paniculata_contig11301.836.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4051bp|location=Sequence derived from alignment at H-paniculata_contig11301:4038..8088+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11301:4038..8088+ >mRNA_H-paniculata_contig11301.836.1 ID=mRNA_H-paniculata_contig11301.836.1|Name=mRNA_H-paniculata_contig11301.836.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig11301:4038..8088+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |