mRNA_H-paniculata_contig30891.8360.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30891.8360.1 vs. uniprot
Match: D7FJ23_ECTSI (HEAT repeat-containing protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ23_ECTSI) HSP 1 Score: 196 bits (499), Expect = 2.140e-55 Identity = 100/150 (66.67%), Postives = 120/150 (80.00%), Query Frame = 1
Query: 1 VHLYNVDAVVECCLPWHDTVAFARMVQLLTIRGTKWVFLEDVQKTGCPLPREAIARRCARDYGLLRFLCMSARRSSSMASE------DMSPVAVASSATTSGRAKLYSFYAAVVVEALGLLGSTNEALLRALVPDVIHGLSVTRSPEYQV 432
V+ YNVDAVVECCLPWHDTVAFARMVQLL+++G++W FL VQKTG PLPREAIARRCARD+GLLRFLC+SARR+++ A+ AT +GRAKL+SFYAA VVEAL LG+T++ LLRALVP V+HGLS T+SPEYQ+
Sbjct: 127 VYQYNVDAVVECCLPWHDTVAFARMVQLLSLKGSRWEFLTPVQKTGSPLPREAIARRCARDFGLLRFLCVSARRAAARAASCSVXXXXXXXXXXXXXATAAGRAKLFSFYAATVVEALASLGTTSDPLLRALVPTVVHGLSATKSPEYQM 276
BLAST of mRNA_H-paniculata_contig30891.8360.1 vs. uniprot
Match: A0A6H5KF89_9PHAE (HEAT repeat-containing protein 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF89_9PHAE) HSP 1 Score: 196 bits (498), Expect = 2.910e-55 Identity = 101/154 (65.58%), Postives = 120/154 (77.92%), Query Frame = 1
Query: 1 VHLYNVDAVVECCLPWHDTVAFARMVQLLTIRGTKWVFLEDVQKTGCPLPREAIARRCARDYGLLRFLCMSARRSS------SMASEDMSPVAVASSATTSGRAKLYSFYAAVVVEALGLLGSTNEALLRALVPDVIHGLSVTRSPEYQVRNDG 444
V+ YNVDAVVECCLPWHDTVAFARMVQLL+++G++W FL VQKTG PLPREAIARRCARD+GLLRFLC+SARRS+ S+++ +GRAKL+SFYAA VVEAL LG+T++ LLRALVP V+HGLS T+SPEYQV G
Sbjct: 127 VYQYNVDAVVECCLPWHDTVAFARMVQLLSLKGSRWEFLTPVQKTGSPLPREAIARRCARDFGLLRFLCVSARRSAARAASCSVSAXXXXXXXXXXXXXAAGRAKLFSFYAATVVEALASLGTTSDPLLRALVPTVVHGLSATKSPEYQVGGGG 280
BLAST of mRNA_H-paniculata_contig30891.8360.1 vs. uniprot
Match: A0A835ZGF5_9STRA (HEAT repeat-containing protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF5_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.550e-26 Identity = 61/145 (42.07%), Postives = 88/145 (60.69%), Query Frame = 1
Query: 1 VHLYNVDAVVECCLPWHDTVAFARMVQLLTIR--GTKWVFLEDVQKTGCPLPREAIARRCARDYGLLRFLCMSARRSSSMASEDMSPVAVASSATTSGRAKLYSFYAAVVVEALGLLGSTNEALLRALVPDVIHGLSVTRSPEYQ 429
++ +NVDAVV C LPWHD+ F RMVQLL + G +W FL V KTG PLPREA+AR+ + D LL F+C ARR AS D ++++F+A V EA+ L + +E+++RAL+P ++ G S +P++Q
Sbjct: 567 IYHHNVDAVVSCILPWHDSKVFVRMVQLLNLTQDGGRWAFLTAVAKTGIPLPREALARQASHDMALLEFICKLARR----ASGDF--------------CRVHTFFAMVTTEAMQLRRAVSESMVRALLPTLLRGASAVAAPQHQ 693
BLAST of mRNA_H-paniculata_contig30891.8360.1 vs. uniprot
Match: A0A4Y7IJX2_PAPSO (BP28CT domain-containing protein n=3 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7IJX2_PAPSO) HSP 1 Score: 97.1 bits (240), Expect = 1.540e-20 Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 1 VHLYNVDAVVECCLPWHDTVAFARMVQLLTIRGTKWVFLEDVQKTGCPLPREAIARRCARDYGLLRFLCMSARRSSSMASEDMSPVAVASSATTSGRAKLYSFYAAVVVEALGLLGSTNEALLRALVPDVIHGL--SVTRSPEYQ 429
VH+YN+D +V C LP+HDT AF R+VQ++ ++ +KW FLE VQK+G P PR + ++C RD GLL LC A M ++ P V + SF+ AV VE G L + +R ++ V GL + SP+++
Sbjct: 126 VHVYNIDELVNCALPYHDTAAFVRIVQIVQLQNSKWGFLEAVQKSGAPPPRSVLVQQCVRDRGLLVTLCDYA-----MPAKKYQPSVV-----------VISFFTAVAVEVFGALTVIDADTVRKVIQFVFKGLDPNANASPDHK 254
BLAST of mRNA_H-paniculata_contig30891.8360.1 vs. uniprot
Match: W1NZT5_AMBTC (BP28CT domain-containing protein n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1NZT5_AMBTC) HSP 1 Score: 95.5 bits (236), Expect = 5.310e-20 Identity = 54/135 (40.00%), Postives = 77/135 (57.04%), Query Frame = 1
Query: 1 VHLYNVDAVVECCLPWHDTVAFARMVQLLTIRGTKWVFLEDVQKTGCPLPREAIARRCARDYGLLRFLCMSARRSSSMASEDMSPVAVASSATTSGRAKLYSFYAAVVVEALGLLGSTNEALLRALVPDVIHGLS 405
VH+YN+D +V C LP+HDT F R+VQLL +R TKW FLE V+ +G P PR+ I ++C RD+G+L +C A M V S T G F AV+VE LG + + L++ ++P V+ L+
Sbjct: 126 VHVYNMDDLVLCALPYHDTTVFVRIVQLLDLRNTKWGFLEGVKVSGAPPPRKVIVQQCTRDFGVLEAICNYA----------MPKKKVLYSRTVVG------FSTAVIVETLGAVTVVDSELVQRIIPFVLSCLN 244
BLAST of mRNA_H-paniculata_contig30891.8360.1 vs. uniprot
Match: A0A388JTG6_CHABU (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JTG6_CHABU) HSP 1 Score: 95.1 bits (235), Expect = 7.250e-20 Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 1
Query: 1 VHLYNVDAVVECCLPWHDTVAFARMVQLLTIRGTKWVFLEDVQKTGCPLPREAIARRCARDYGLLRFLCMSARRSSSMASEDMSPVAVASSATTSGRAKLYSFYAAVVVEALGLLGSTNEALLRALVPDVIHGLSVTRSPEYQ 429
+H+YNVDAV+ C LP+H+T F R+VQLL I T+W FL+ VQ+ G LPRE + RC +D +L +C A VAS+A + SF + +E LG + S +E L+ ++P ++ G S E Q
Sbjct: 80 IHVYNVDAVMACVLPYHETNLFVRIVQLLQIEHTRWEFLQGVQENGTALPREVLVARCTKDMAVLDAICEMAN--------------VASAAGVKSHT-VVSFSTVMAMEVLGAVNSVSETLVMRILPFILEGFKNESSVEKQ 207
BLAST of mRNA_H-paniculata_contig30891.8360.1 vs. uniprot
Match: A0A2P2MAZ3_RHIMU (Uncharacterized protein At3g06530 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MAZ3_RHIMU) HSP 1 Score: 94.0 bits (232), Expect = 7.760e-20 Identity = 51/134 (38.06%), Postives = 77/134 (57.46%), Query Frame = 1
Query: 1 VHLYNVDAVVECCLPWHDTVAFARMVQLLTIRGTKWVFLEDVQKTGCPLPREAIARRCARDYGLLRFLCMSARRSSSMASEDMSPVAVASSATTSGRAKLYSFYAAVVVEALGLLGSTNEALLRALVPDVIHGL 402
+H+YN + ++ C LP+HDT AF R+VQL+ R +KW FL+ V+ +G PLPR + R+C RD G+L LC A SPV + + F AV+VE LG L + N+ +++ ++P V+ GL
Sbjct: 126 IHVYNFEDLILCALPYHDTHAFVRVVQLIDTRNSKWKFLDGVKVSGAPLPRSVVVRQCIRDMGVLEALCGYA-----------SPVKKYRPSRP-----VICFCTAVIVEMLGSLTAVNDDVVKGILPFVVSGL 243
BLAST of mRNA_H-paniculata_contig30891.8360.1 vs. uniprot
Match: B9R9Y1_RICCO (BP28CT domain-containing protein n=2 Tax=Ricinus communis TaxID=3988 RepID=B9R9Y1_RICCO) HSP 1 Score: 94.7 bits (234), Expect = 9.860e-20 Identity = 50/137 (36.50%), Postives = 76/137 (55.47%), Query Frame = 1
Query: 1 VHLYNVDAVVECCLPWHDTVAFARMVQLLTIRGTKWVFLEDVQKTGCPLPREAIARRCARDYGLLRFLCMSARRSSSMASEDMSPVAVASSATTSGRAKLYSFYAAVVVEALGLLGSTNEALLRALVPDVIHGLSVT 411
+H+YNV+ ++ C LP+HDT AF R+VQ++ R +KW FLE V+ +G P PR + ++C RD G+L LC A + + PV SF AVV+E LG + N +++ ++P V+ GL T
Sbjct: 126 IHVYNVEDLILCALPYHDTHAFVRIVQIIDTRNSKWTFLEGVKNSGAPPPRSVVVQQCIRDMGVLEALCNYASPIKKL--QPSRPV--------------ISFCTAVVIEILGSIPVVNSDIVKRILPFVVSGLQPT 246
BLAST of mRNA_H-paniculata_contig30891.8360.1 vs. uniprot
Match: A0A200Q0Y6_9MAGN (BP28 n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200Q0Y6_9MAGN) HSP 1 Score: 94.4 bits (233), Expect = 1.350e-19 Identity = 55/137 (40.15%), Postives = 77/137 (56.20%), Query Frame = 1
Query: 1 VHLYNVDAVVECCLPWHDTVAFARMVQLLTIRGTKWVFLEDVQKTGCPLPREAIARRCARDYGLLRFLCMSARRSSSMASEDMSPVAVASSATTSGRAKLYSFYAAVVVEALGLLGSTNEALLRALVPDVIHGLSVT 411
VH+YN D ++ C LP+HDT AF R+VQL+ +R +KW FLE V+ +G P PR+ I ++C RD G+L LC A SPV + + SF+ AVVVE LG + + +R ++P V GL T
Sbjct: 126 VHVYNTDELLFCALPYHDTHAFVRIVQLVELRNSKWGFLEGVKVSGAPPPRKVIVQQCIRDMGILEALCKYA-----------SPVKKYQPSIP-----VVSFFTAVVVEVLGAVPILDSDSVRKVLPFVFSGLDPT 246
BLAST of mRNA_H-paniculata_contig30891.8360.1 vs. uniprot
Match: A0A2P2MAU4_RHIMU (Uncharacterized protein MANES_14G038400 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MAU4_RHIMU) HSP 1 Score: 94.0 bits (232), Expect = 1.730e-19 Identity = 51/134 (38.06%), Postives = 77/134 (57.46%), Query Frame = 1
Query: 1 VHLYNVDAVVECCLPWHDTVAFARMVQLLTIRGTKWVFLEDVQKTGCPLPREAIARRCARDYGLLRFLCMSARRSSSMASEDMSPVAVASSATTSGRAKLYSFYAAVVVEALGLLGSTNEALLRALVPDVIHGL 402
+H+YN + ++ C LP+HDT AF R+VQL+ R +KW FL+ V+ +G PLPR + R+C RD G+L LC A SPV + + F AV+VE LG L + N+ +++ ++P V+ GL
Sbjct: 126 IHVYNFEDLILCALPYHDTHAFVRVVQLIDTRNSKWKFLDGVKVSGAPLPRSVVVRQCIRDMGVLEALCGYA-----------SPVKKYRPSRP-----VICFCTAVIVEMLGSLTAVNDDVVKGILPFVVSGL 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30891.8360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30891.8360.1 >prot_H-paniculata_contig30891.8360.1 ID=prot_H-paniculata_contig30891.8360.1|Name=mRNA_H-paniculata_contig30891.8360.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp VHLYNVDAVVECCLPWHDTVAFARMVQLLTIRGTKWVFLEDVQKTGCPLPback to top mRNA from alignment at H-paniculata_contig30891:122..714+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30891.8360.1 ID=mRNA_H-paniculata_contig30891.8360.1|Name=mRNA_H-paniculata_contig30891.8360.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=593bp|location=Sequence derived from alignment at H-paniculata_contig30891:122..714+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30891:122..714+ >mRNA_H-paniculata_contig30891.8360.1 ID=mRNA_H-paniculata_contig30891.8360.1|Name=mRNA_H-paniculata_contig30891.8360.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at H-paniculata_contig30891:122..714+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |