mRNA_H-paniculata_contig3087.8353.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3087.8353.1 vs. uniprot
Match: D7G395_ECTSI (Possible MAPK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G395_ECTSI) HSP 1 Score: 104 bits (260), Expect = 1.960e-24 Identity = 52/78 (66.67%), Postives = 58/78 (74.36%), Query Frame = 2
Query: 2 SAEERRKLLLFITGTDRLPEASCEDLSIEILFGLPGARTSPESTDSTRKEARKELGTIPTAHTCDNMLELPNYWALLL 235
S EERR+LLLFITGTDRLPEA CE LSIEI F +PG E+ R A K LG +PTAHTCDN+LELPNYW LL+
Sbjct: 2366 SPEERRRLLLFITGTDRLPEAGCETLSIEIPFEVPGGSKDIETA---RLAATKSLGQVPTAHTCDNILELPNYWMLLM 2440
BLAST of mRNA_H-paniculata_contig3087.8353.1 vs. uniprot
Match: A0A7S2G9P9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2G9P9_9EUKA) HSP 1 Score: 70.9 bits (172), Expect = 3.950e-14 Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 2
Query: 2 SAEERRKLLLFITGTDRLPEASCEDLSIEILFGLPGARTSPESTDSTRKEARKELGTIPTAHTCDNMLELPNYWALL 232
S ++RKL+ F+TG+ RLP E L +++LF G T+ + LGT+P AHTCDN+LE+PNYWA L
Sbjct: 1 STADKRKLVKFVTGSGRLPPPGTEVLRVQVLFEEEGEATTAAA-----------LGTLPQAHTCDNLLEVPNYWAAL 66
BLAST of mRNA_H-paniculata_contig3087.8353.1 vs. uniprot
Match: A0A835ZDJ6_9STRA (HECT domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ6_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.290e-13 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 2
Query: 8 EERRKLLLFITGTDRLPEASCEDLSIEILFGLPGARTSPESTDSTRKEARKELGTIPTAHTCDNMLELPNYWALLL 235
+E+ LLLFITG RLP E ++IE+ + P AR + S A+ LG +P AHTCDN+LE+P+YW L+
Sbjct: 64 QEKWGLLLFITGVRRLPPPKTELMAIELQYMPPEARAGSNRSASASDAAQSLLGRVPCAHTCDNVLEVPDYWTALV 139
BLAST of mRNA_H-paniculata_contig3087.8353.1 vs. uniprot
Match: A0A7S4BF61_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BF61_CHRCT) HSP 1 Score: 67.8 bits (164), Expect = 1.890e-11 Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 2
Query: 2 SAEERRKLLLFITGTDRLPEASCEDLSIEILFGLPGARTSPESTDSTRKEARKELGTIPTAHTCDNMLELPNYWALL 232
S +++R +L F+TG++R P A E +SI++ F L A T+ A LGT+P AHTCDNMLELPNY A L
Sbjct: 608 STKDKRMVLQFVTGSERRPAAWTEAISIQMPFELDAADTT---------SATHMLGTLPQAHTCDNMLELPNYLAAL 675
BLAST of mRNA_H-paniculata_contig3087.8353.1 vs. uniprot
Match: A0A7S3ZUA9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUA9_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.920e-11 Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 2
Query: 11 ERRKLLLFITGTDRLPEASCEDLSIEILFGLPGARTSPESTDSTRKEARKELGTIPTAHTCDNMLELPNYWALLL 235
+RRKLL+F+TG RLP E L++E+ F P D E R+ L +P +HTCDN+LELPNYW LL
Sbjct: 1535 QRRKLLVFVTGVSRLPARHAEFLTVELPF-------LPFGVD----EQRRMLAMVPQSHTCDNILELPNYWEALL 1598
BLAST of mRNA_H-paniculata_contig3087.8353.1 vs. uniprot
Match: A0A250X7M0_9CHLO (HECT domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X7M0_9CHLO) HSP 1 Score: 65.9 bits (159), Expect = 8.950e-11 Identity = 33/78 (42.31%), Postives = 45/78 (57.69%), Query Frame = 2
Query: 2 SAEERRKLLLFITGTDRLPEASCEDLSIEILFGLPGARTSPESTDSTRKEARKELGTIPTAHTCDNMLELPNYWALLL 235
S E++++ L+F+TG+ RLP E L +E F GA E + LG +P AHTCDN+LE+PNYW LL
Sbjct: 690 SLEKKKQFLVFVTGSSRLPLPGSELLKVEAPFVALGAA-----------EHKAHLGMVPQAHTCDNLLEVPNYWEALL 756
BLAST of mRNA_H-paniculata_contig3087.8353.1 vs. uniprot
Match: A0A7S1XCL5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1XCL5_9CHLO) HSP 1 Score: 63.5 bits (153), Expect = 1.390e-10 Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 2
Query: 8 EERRKLLLFITGTDRLPEASCEDLSIEILFGLPGARTSPESTDSTRKEARKELGTIPTAHTCDNMLELPNYWALLL 235
E +RK +LF TG+DRLP E L +E+ F A + +K LG +P AHTC+N+LELPNYW +L
Sbjct: 111 ELKRKFVLFCTGSDRLPLPGTELLRVELPFVAFSA-----------SDQKKMLGMLPQAHTCENVLELPNYWEAVL 175
BLAST of mRNA_H-paniculata_contig3087.8353.1 vs. uniprot
Match: A0A7R9TSF4_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TSF4_9VIRI) HSP 1 Score: 65.1 bits (157), Expect = 1.570e-10 Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 2
Query: 2 SAEERRKLLLFITGTDRLPEASCEDLSIEILFGLPGARTSPESTDSTRKEARKELGTIPTAHTCDNMLELPNYWA 226
SA +RK L+F+TG+DRLP E L +E+ F GA + R+++G +P AHTC+N+LELP+Y+A
Sbjct: 326 SAPMKRKFLVFVTGSDRLPAPGAELLKVEMPFVALGAA-----------DLREQMGMLPQAHTCENILELPDYYA 389
BLAST of mRNA_H-paniculata_contig3087.8353.1 vs. uniprot
Match: A0A7R9TTY4_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TTY4_9VIRI) HSP 1 Score: 65.1 bits (157), Expect = 1.650e-10 Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 2
Query: 2 SAEERRKLLLFITGTDRLPEASCEDLSIEILFGLPGARTSPESTDSTRKEARKELGTIPTAHTCDNMLELPNYWA 226
SA +RK L+F+TG+DRLP E L +E+ F GA + R+++G +P AHTC+N+LELP+Y+A
Sbjct: 519 SAPMKRKFLVFVTGSDRLPAPGAELLKVEMPFVALGAA-----------DLREQMGMLPQAHTCENILELPDYYA 582
BLAST of mRNA_H-paniculata_contig3087.8353.1 vs. uniprot
Match: A0A024U1P8_9STRA (HECT-type E3 ubiquitin transferase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1P8_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.690e-10 Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 2
Query: 2 SAEERRKLLLFITGTDRLPEASCEDLSIEILFGLPGARTSPESTDSTRKEARKELGTIPTAHTCDNMLELPNYWALL 232
++ ++RK + F+TG D+LP E L IE+ F G E +K+L +P +HTCDN+LELPNYWA L
Sbjct: 1065 ASTDQRKFVKFVTGIDKLPSPGTEFLRIEVPFTAIG-----------NSERQKQLLLLPQSHTCDNILELPNYWAAL 1130 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3087.8353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3087.8353.1 >prot_H-paniculata_contig3087.8353.1 ID=prot_H-paniculata_contig3087.8353.1|Name=mRNA_H-paniculata_contig3087.8353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp LCGRAPKVVIVHHRYGSTTGGELRGSVDRDSIWIARRKNLPRKYGLDSQGback to top mRNA from alignment at H-paniculata_contig3087:5478..6180+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3087.8353.1 ID=mRNA_H-paniculata_contig3087.8353.1|Name=mRNA_H-paniculata_contig3087.8353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=703bp|location=Sequence derived from alignment at H-paniculata_contig3087:5478..6180+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3087:5478..6180+ >mRNA_H-paniculata_contig3087.8353.1 ID=mRNA_H-paniculata_contig3087.8353.1|Name=mRNA_H-paniculata_contig3087.8353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=474bp|location=Sequence derived from alignment at H-paniculata_contig3087:5478..6180+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |