prot_H-paniculata_contig30863.8351.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30863.8351.1
Unique Nameprot_H-paniculata_contig30863.8351.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length119
Homology
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BLAST of mRNA_H-paniculata_contig30863.8351.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 4.900e-5
Identity = 43/131 (32.82%), Postives = 59/131 (45.04%), Query Frame = 0 
Query:    1 MERLRRLLVRAPADRAWRRRGLLVMCRAFLDKDGFGSISNQPLSDEVDEAASE-------------DGTNKHGKTEGSVGSKADSDVDTTSKATASIETTGAEASCRLRGVEAWVINLEQDELFRLIISFL 118
            +ERL RLL RAP DRAWRRRG LV+ R   D+    ++   P + +  E   +             DGTN  G   G+           +S   A IE           GV AW++ L ++ +FR I+ FL
Sbjct:  249 LERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRL-AVEIPPAAADATEQPQQRPRRRASTGQVEVDGTNGGGGXTGA-----------SSGVRAGIEAVHEGTVAGFGGVSAWMMALTEEGVFRRIVGFL 367
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BLAST of mRNA_H-paniculata_contig30863.8351.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 6.780e-5
Identity = 25/35 (71.43%), Postives = 27/35 (77.14%), Query Frame = 0 
Query:    2 ERLRRLLVRAPADRAWRRRGLLVMCRAFLDKDGFG 36
            ER R LL RAPADRAWRRRGLLV+CRA  D+   G
Sbjct:  331 ERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLG 365
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BLAST of mRNA_H-paniculata_contig30863.8351.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 9.230e-5
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 0 
Query:    2 ERLRRLLVRAPADRAWRRRGLLVMCRAFLDKDGFG 36
            ER R LL RAPADRAWRRRGLLV+C A+ D+   G
Sbjct:  327 ERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQLG 361
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30863.8351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JU78_9PHAE4.900e-532.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1U1_ECTSI6.780e-571.43Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G137_ECTSI9.230e-568.57Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30863contigH-paniculata_contig30863:44..400 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30863.8351.1mRNA_H-paniculata_contig30863.8351.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30863 43..711 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30863.8351.1 ID=prot_H-paniculata_contig30863.8351.1|Name=mRNA_H-paniculata_contig30863.8351.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp
MERLRRLLVRAPADRAWRRRGLLVMCRAFLDKDGFGSISNQPLSDEVDEA
ASEDGTNKHGKTEGSVGSKADSDVDTTSKATASIETTGAEASCRLRGVEA
WVINLEQDELFRLIISFL*
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