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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 909 |
| Cds size | 537 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30854.8350.1 >prot_H-paniculata_contig30854.8350.1 ID=prot_H-paniculata_contig30854.8350.1|Name=mRNA_H-paniculata_contig30854.8350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp
MMTKIFIVDVPQEGFDMQQQVLHLPGTNVMLAFLNIASCLSIITYGSTLT
QVLKKALIFLSNNLDEKGTIALALPDMLCDSSHLRALLKEAGLIMESVPL
VSHYGNGHAGRKKRSRSSCSPTRAPSSSQRTKEMCSSATAIPGRDRRLRQ
RGRQDATPSVLLPIPPSTQGLWYPSSAH* back to topmRNA from alignment at H-paniculata_contig30854:173..2314+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig30854.8350.1 ID=mRNA_H-paniculata_contig30854.8350.1|Name=mRNA_H-paniculata_contig30854.8350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2142bp|location=Sequence derived from alignment at H-paniculata_contig30854:173..2314+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGCTGGTACACAGAGGAGATGCAAGTAGTGGAGAAGTCGCTTGACGAT
CATCATGAGGTAATCCTGTTGTGTGTTGTGTGTGTGTGTGTTGCCCTCCT
CTAATGGTTTAGTCCGCAGATTTGGATACAGGGTGCATAAGGCATGGTTG
CTTCCAATCCTGCTGATACGGTCAGTTAATTGATTCCCGTTGACTGATAA
TTTGAGCTTGGTCTCTTGAGCAGCAGCTTGGTCATGGGACAGTGGTGCAC
CGCCACGACGTATGCTGCCCACAGGTATCTCCTCGCGCTGAACTGCTACA
GTTCCGCGCGTGATGTCTGTTCTCCAGGAAAATGATGACGAAGATATTCA
TCGTGGATGTACCTCAAGAGGGGTTCGACATGCAGCAACAGGTACTGCAT
CTGCCGGGCACAAACGTCATGTTGGCGTTCTTGAACATCGCGAGCTGTCT
TTCAATCATCACCTACGGCTCCACTCTGACCCAAGTCCTGAAGAAGGCCT
TGATCTTTCTCTCGAACAACTTGGACGAGAAGGGCACCATCGCCCTGGCT
CTTCCTGACATGTTGTGTGACAGCTCACATCTGAGAGGTACGTTTGGCGT
GATAATGGTGAACCCTTGTACTCATGTTTTTTTTACATTAAGTCTTGGTC
CTTTGTTTTTGGACTGTATAACGGGTCTCATCCTCTACCTCGACTAAAAT
GCAGTGTACTATAATAATACGTTGATCGGCATTGAGAACCTGTGTGCGTT
GGCGTGGCGGCTCCTCAAATAACTTCATTAAGCCGTGTGCCTTGATGTTG
AGTGTGGTGTGTGTACAGCAGTCTCCCCCCTCCCCACTTTTGTGTTCTAT
TTTGGGGCCACACCCCTGGGCACCACTGCTGTGCCCCCCAAAAAATAACA
AAAAATCACCACCACCAGCCGCCGTAAAATACCGCTGATTATTTGAGGCA
CCCTCAAGCAGAAACACTCTTGGAATTTCCGCACATAAGATCATAGCCAA
TTGCGACGTCGGTATGAATGAGAAGCCGCGATGTCCTAATACAATATTCG
TTTGGTAATTGAGCAGCGAACTGTAGACGGTTGCCGTATCTGTAAGTCCC
AGTATTTCTAGGCGGTTGATGCCGGCACTGCGTAGCGCTCGCTAGTGTAT
GCTGTGCTGCTGTTATAATAGTAGTGCTCGAATACCAAATTCAAAAATGT
GCACCGTTTGTTGTTTTTGTAGAAGAGGGAAGTTCACGATTCGTACTCCC
ATTACTATGCTGTACTGCGTTTACCGTGTGTCGCGGCTTTGCTGAAAGAG
GCTGGGCTTATCATGGAGTCCGTGCCTCTCGTCTCGCATTATGGTAACGG
CCACGCCGGCCGTAAGAAAAGAAGCAGAAGCTCATGCTCCCCAACCAGGG
CTCCATCATCCTCACAGCGCACAAAGGAGATGTGTTCATCTGCAACGGCG
ATACCGGGTCGAGATCGACGCCTTCGGCAGCGCGGGCGTCAAGACGCAAC
GCCGTCGGTTCTCCTGCCGATACCGCCGTCAACGCAGGGGCTGTGGTATC
CCAGCAGCGCCCACTGAAGGGAACGTATATCACCGAAAACGTGGCAGAGT
TTCTGATCCGACGGTAAGGATACGACGGGGGCGTCGTTCTTTTGGCTATT
CTTGGTGTCTGCCTTTAGTCTAAGTTTGCTGTTTTTAGGGCCGTCATGCC
GATGCTGTGTGCTCGCCCGTTGCATTTTTCTATAGCACTGTTGAATACTA
TAAGAAGATAGTTGTATTCAACATGCTACTCCGTGCAGTTCAGTTGAAAA
TACCGCGCCTCCGCCACTGCAAAATCGATCGCATCAGTGATTTGATATGT
GATGTACTCTGCTACCTCTATTCGTTATACTCGTTTTTTAACAGAGGTGT
TCATCACTCCCGCTTCCCTCGAGTTGTAACAGATTTACTGATGCGGGTGA
TGCGGTCCTATCTTCTTCCGCTGATCGAGACAGTGACCTCTCGTGGAAGG
TGCTTAAGGAGGGCCGGACCCTTGTCGCACTCGTGCCCGAACTTTCGAGG
CTCCAACCTGTATCTGATGACTTGGCTGCTGCCTGCCGCGAGAACACCCG
GACAGGGCTGTGGTCGAAGATGCTATCGGCGGACAAGCCCCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig30854:173..2314+ >mRNA_H-paniculata_contig30854.8350.1 ID=mRNA_H-paniculata_contig30854.8350.1|Name=mRNA_H-paniculata_contig30854.8350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1074bp|location=Sequence derived from alignment at H-paniculata_contig30854:173..2314+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGACGAAGATATTCATCGTGGATGTACCTCAAGAGGGGTTCGACAT
GCAGCAACAGGTACTGCATCTGCCGGGCACAAACGTCATGTTGGCGTTCT
TGAACATCGCGAGCTGTCTTTCAATCATCACCTACGGCTCCACTCTGACC
CAAGTCCTGAAGAAGGCCTTGATCTTTCTCTCGAACAACTTGGACGAGAA
GGGCACCATCGCCCTGGCTCTTCCTGACATGTTGTGTGACAGCTCACATC
TGAGAATGATGACGAAGATATTCATCGTGGATGTACCTCAAGAGGGGTTC
GACATGCAGCAACAGGTACTGCATCTGCCGGGCACAAACGTCATGTTGGC
GTTCTTGAACATCGCGAGCTGTCTTTCAATCATCACCTACGGCTCCACTC
TGACCCAAGTCCTGAAGAAGGCCTTGATCTTTCTCTCGAACAACTTGGAC
GAGAAGGGCACCATCGCCCTGGCTCTTCCTGACATGTTGTGTGACAGCTC
ACATCTGAGAGCTTTGCTGAAAGAGGCTGGGCTTATCATGGAGTCCGTGC
CTCTCGTCTCGCATTATGGTAACGGCCACGCCGGCCGTAAGAAAAGAAGC
AGAAGCTCATGCTCCCCAACCAGGGCTCCATCATCCTCACAGCGCACAAA
GGAGATGTGTTCATCTGCAACGGCGATACCGGGTCGAGATCGACGCCTTC
GGCAGCGCGGGCGTCAAGACGCAACGCCGTCGGTTCTCCTGCCGATACCG
CCGTCAACGCAGGGGCTGTGGTATCCCAGCAGCGCCCACTGAGCTTTGCT
GAAAGAGGCTGGGCTTATCATGGAGTCCGTGCCTCTCGTCTCGCATTATG
GTAACGGCCACGCCGGCCGTAAGAAAAGAAGCAGAAGCTCATGCTCCCCA
ACCAGGGCTCCATCATCCTCACAGCGCACAAAGGAGATGTGTTCATCTGC
AACGGCGATACCGGGTCGAGATCGACGCCTTCGGCAGCGCGGGCGTCAAG
ACGCAACGCCGTCGGTTCTCCTGCCGATACCGCCGTCAACGCAGGGGCTG
TGGTATCCCAGCAGCGCCCACTGA back to top
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