mRNA_H-paniculata_contig3085.8349.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3085.8349.1
Unique NamemRNA_H-paniculata_contig3085.8349.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3085.8349.1 vs. uniprot
Match: A0A6H5L4W2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4W2_9PHAE)

HSP 1 Score: 551 bits (1420), Expect = 1.310e-174
Identity = 329/620 (53.06%), Postives = 398/620 (64.19%), Query Frame = 3
Query: 2370 WHDFSWTHGVGELLTALERLSCLHPLAVVARKRLDISFYPDIAHAVKLSLAATFFPGSAGEAAREEASLDVSRTWLSSASILRSRGVEPRKQLHSC------------------QTAAASSTATPTDAGDNVAPFLSVRTAFDLYLKALALPRGSRIVCSALTIPDMVKIFLEHGLVPLPVDLDPNTLAPDPGALESEVEKASGDRAEGSGT-------VRAVYVAHRIPLMSQVDMVPIAEAVARHGLLLWEDCAQVFTGLQGYLGHPASDAVFFSFGVIKRATAFGGGVVRIGNKAILSAMQREEAQYPAQPAMTYLRRVFKCSMLLACTSPLLFGILVHLLGLFGVDHDKVIMKLSHGFPKKGMLKAIRHRPCVPLLQMLTWRIGRYTPDGVETRLRYCDRMLSLLDRALPRQQLRRQRD---------IVREQPLAVASN------CRVQAGDVLPGIRAHRHTLWLFPVMVAGGSERADGVVEALLREGFDATRAPTSLVPIDRCLAV------DKPSSEGSC-LPRCSVMMDSLVYLPLLNNIPDSEWDRLAMALARVL-SINTSTNSAEG--------GAIKLKEKRKLKRGRPTVSQRLAAFALRLDTFVVS 4061
            W D  W   + +LL ALERLS LHP++V+ARKRLD+SF  D+A A +LSL A    G A EA R EA   V+R W    S +RS                               + AA++     +A + VAPFLSVRTAFDLYLKAL LPRGS +VCSALTIPDMV IF EHGLVP+PVDLDP TLAP+PGALE+EV                    VRA+YVAH     +QVDM  I EA ARHGLLLWEDCAQ+FTGL GYLGHP SDA FFSFGVIKRATAFGGG+ RI +  +L  M REEA+YP+Q A  YLRRV KC ++LA T+PLL+GI++H L + G++HD+V+MKLS GFPKKG+++AIRHR  +PLLQML WRI RY  +GVE RLR+C+RMLS+L+ AL ++Q + Q             +E P A++             GDVLPG++A+RHTLWL+PVMV GG +RA  VV  LLREGFDATRAPTSL+PI+RC         D  SS   C  PRCS MMDSLVYLPL NNIPDSE DR+A+ALAR L S  +S    +G         +   K +    R R  +++ L AFA RLD   VS
Sbjct:   11 WRDVHWMAPLWQLLAALERLSSLHPMSVIARKRLDVSFL-DMARACRLSLKA-LLSGQASEAVRNEALRKVARAW----SPIRSGSXXXXXXXXXXXXXXXXXXXXXXSAPIRGNSRAATAGPIAKEAAE-VAPFLSVRTAFDLYLKALDLPRGSLVVCSALTIPDMVTIFEEHGLVPVPVDLDPETLAPEPGALEAEVAMCGXXXXXXXXXXXXXKQRVRAIYVAHVFG--AQVDMTHIVEAAARHGLLLWEDCAQMFTGLGGYLGHPDSDAAFFSFGVIKRATAFGGGIARIRDDQVLRPMLREEAEYPSQSAAAYLRRVLKCWLMLALTTPLLYGIILHTLAVLGIEHDEVVMKLSKGFPKKGLMRAIRHRASIPLLQMLAWRISRYPTEGVEIRLRHCNRMLSVLEAALSQRQRQPQPPRALPARGGGAAQEDPSALSVGEGXXXXXXXXVGDVLPGVKAYRHTLWLYPVMVTGGPDRASYVVRDLLREGFDATRAPTSLMPIERCTTTKYKGPADGVSSSSPCRTPRCSAMMDSLVYLPLANNIPDSEVDRMALALARSLWSCGSSAAPGDGRLDSCGSPASGPRKSRGNGSRERTALARSLVAFAFRLDVIAVS 621          
BLAST of mRNA_H-paniculata_contig3085.8349.1 vs. uniprot
Match: UPI0019FC8CB6 (DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019FC8CB6)

HSP 1 Score: 220 bits (561), Expect = 4.400e-59
Identity = 140/401 (34.91%), Postives = 216/401 (53.87%), Query Frame = 3
Query: 2700 GDNVAPFLSVRTAFDLYLKALALPRGSRIVCSALTIPDMVKIFLEHGLVPLPVDLDPNTLAPDPGALESEVEKASGDRAEGSGTVRAVYVAHRIPLMSQVDMVPIAEAVARHGLLLWEDCAQVFTGLQGYLGHPASDAVFFSFGVIKRATAFGGGVVRIGNKAILSAMQREEAQYPAQPAMTYLRRVFKCSMLLACTSPLLFGILVHLLGLFGVDHDKVIMKLSHGFPKKGMLKAIRHRPCVPLLQMLTWRIGRYTPDGVETRLRYCDRMLSLLDRALPRQQLRRQRDIVREQPLAVASNCRVQAGDVLPGIRAHRHTLWLFPVMVAGGSERADGVVEALLREGFDATRAPTSLVPIDRCLAVDKPSSEGSCLP-RCSVMMDSLVYLPLLNNIPDSEWDRL 3899
            G+N+A  LSVR+ FDL+LKA+ LP GS ++ SA+TIP MV+I   HGL+P+PVD+D +TL+ DP    +E+E   G R       RA+ VAH     S++D+ PIA    RHGLLL +DCAQ + G + YLGH  SD V FSFG IK  TA GG V+   +  +LS M++  A YP QP   +  RV    +L   T P +  +   +    G+D+D+++ +    F    +++ IRH+PCVPLL++L  R+      G++ R+    R+                       P   A  C        PG++A  HT W+ P++      + + +   L +EGFDATR+ +SL        V  P+   + +P + + +M+ ++Y+P+ + + D++  RL
Sbjct:   55 GNNLA-CLSVRSGFDLFLKAIDLPGGSEVIVSAITIPPMVQILEHHGLIPVPVDVDIDTLSVDP----TELELLIGPRT------RAILVAHLFG--SRMDLKPIAAIAQRHGLLLMKDCAQAYAGSE-YLGHSTSDVVMFSFGPIKTQTALGGAVLHFRDPTLLSRMRQLHATYPCQPKCPFWHRVVLFMLLRLLTRPPILQLFARVCRWRGIDYDQLLSQNLRSFSGGNLIEHIRHQPCVPLLRLLARRLRNKQASGIKQRMALVQRLT----------------------PYLSAHYC--------PGLQALCHTHWVIPILTT----QPEQIARRLQQEGFDATRSASSLA------VVSPPAELFTAIPHQAADLMEHVMYVPVYSAMTDADIQRL 401          
BLAST of mRNA_H-paniculata_contig3085.8349.1 vs. uniprot
Match: D1C505_SPHTD (DegT/DnrJ/EryC1/StrS aminotransferase n=2 Tax=root TaxID=1 RepID=D1C505_SPHTD)

HSP 1 Score: 220 bits (560), Expect = 4.570e-59
Identity = 153/398 (38.44%), Postives = 199/398 (50.00%), Query Frame = 3
Query: 2721 LSVRTAFDLYLKALALPRGSRIVCSALTIPDMVKIFLEHGLVPLPVDLDPNTLAPDPGALESEVEKASGDRAEGSGTVRAVYVAHRIPLMSQVDMVPIAEAVARHGLLLWEDCAQVFTGLQGYLGHPASDAVFFSFGVIKRATAFGGGVVRIGNKAILSAMQREEAQYPAQPAMTYLRRVFKCSMLLACTSPLLFGILVHLLGLFGVDHDKVIMKLSHGFPKKGMLKAIRHRPCVPLLQMLTWRIGRYTPDGVETRLRYCDRMLSLLDRALPRQQLRRQRDIVREQPLAVASNCRVQAGDVLPGIRAHRHTLWLFPVMVAGGSERADGVVEALLREGFDATRAPTSLVPIDRCLAVDKPSSEGSCLPRCSVMMDSLVYLPLLNNIPDSEWDRLAMALA 3914
            LSVR+ FDL L+ALALP GS I+ SA+TI DM +I   HGLVP+PVDLD  TL+         V  A+ +RA    T RA+ VAH     S++ +  IA      GLLL EDCAQ FTG   Y GHPASD   FSFG IK ATA GGG+V + +  I   M+  +A YP Q    YL+RV    +     +P  +          G +HD VI     GFP  G++  IR +P  PLL +L  R+ R+ P  V  R +     ++L+                               G   PG RA  H+ W+FP+  A      DG+V  L R GFDATR  +S+  +DR    D+P  E     R   +MD ++YLP+   I D +  RLA A A
Sbjct:   48 LSVRSGFDLLLQALALPAGSEILVSAITIRDMTRIIEHHGLVPVPVDLDMATLS---------VPVANLERAWTPRT-RAILVAHLFG--SRMPLDDIARFARERGLLLIEDCAQAFTG-PDYRGHPASDVCLFSFGPIKTATALGGGIVTVRDGMIRERMRAIQAGYPVQSRRRYLKRVLTFGVFKLLAAPTPYRAFTAACRALGREHDAVISGALRGFPGAGLMAKIRQQPSAPLLALLARRVTRFDPRRVARRTQVARTAIALMP------------------------------GVDRPGTRAAEHSYWVFPIQAAD----PDGLVRRLWRHGFDATRGASSMSVVDR--PPDRPELEPREARR---VMDQVLYLPVYPGIADHDLARLARAAA 393          
BLAST of mRNA_H-paniculata_contig3085.8349.1 vs. uniprot
Match: A0A7C7V0L3_9PLAN (DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7V0L3_9PLAN)

HSP 1 Score: 219 bits (558), Expect = 9.900e-59
Identity = 147/410 (35.85%), Postives = 208/410 (50.73%), Query Frame = 3
Query: 2700 GDNVAPFLSVRTAFDLYLKALALPRGSRIVCSALTIPDMVKIFLEHGLVPLPVDLDPNTLAPDPGALESEVEKASGDRAEGSGTVRAVYVAHRIPLMSQVDMVPIAEAVARHGLLLWEDCAQVFTGLQGYLGHPASDAVFFSFGVIKRATAFGGGVVRIGNKAILSAMQREEAQYPAQPAMTYLRRVFKCSMLLACTSPLLFGILVHLLGLFGVDHDKVIMKLSHGFPKKGMLKAIRHRPCVPLLQMLTWRIGRYTPDGVETRLRYCDRMLSLLDRALPRQQLRRQRDIVREQPLAVASNCRVQAGD--VLPGIRAHRHTLWLFPVMVAGGSERADGVVEALLREGFDATRAPTSLVPIDRCLAVDKPSSEGSC--LPRCSVMMDSLVYLPLLNNIPDSEWDRLAMALAR 3917
            GD+V   LSVRT FDL L+A+  PRGS ++ SA+ I DMV+I   HGLVP+PVD++P+T+AP  GA+   +  A+          R + VAH      +V M PIAE   RHGL++ EDCAQ F G  G+ GHP +D   FSFG IK +TA GG V+R+G++ +L  M+     YP+Q  + YLRR+ K   +   ++ L    +  L  L  VD+D+V    + GF  +     IR +P   LL +L  R+ R+    +  + R   R+L LL                               GD    PG+ +  HT W+FP++V   +E A  + EA    GFDATR           L V    +EG        S +M+ +VYLPL   +PD E +R+A  + R
Sbjct:   41 GDDVLVCLSVRTGFDLLLQAVRFPRGSHLLMSAINIGDMVRIVEHHGLVPVPVDVEPSTMAPRVGAMARAITPAA----------RGLVVAHLFG--GRVAMRPIAELARRHGLMVIEDCAQAFDG--GFRGHPEADVSMFSFGPIKTSTALGGAVIRVGDRQLLGRMRSLHQGYPSQTRVMYLRRLLKYVGIKGLSTRLTLRAVAQLFTLLKVDYDRVAGSAARGFAGRDFFDRIRRQPSPVLLAVLERRLRRFDTFQLCLQQRKAARLLELL-------------------------------GDHVACPGVASQPHTFWVFPILVDNPAELAGRLREA----GFDATR--------QHSLTVIPAPAEGPAWEAKTASAIMERIVYLPLYPQMPDVEIERMAQIVTR 393          
BLAST of mRNA_H-paniculata_contig3085.8349.1 vs. uniprot
Match: A0A7V4HUR0_9BACT (DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V4HUR0_9BACT)

HSP 1 Score: 213 bits (543), Expect = 1.130e-56
Identity = 138/399 (34.59%), Postives = 195/399 (48.87%), Query Frame = 3
Query: 2706 NVAPFLSVRTAFDLYLKALALPRGSRIVCSALTIPDMVKIFLEHGLVPLPVDLDPNTLAPDPGALESEVEKASGDRAEGSGTVRAVYVAHRIPLMSQVDMVPIAEAVARHGLLLWEDCAQVFTGLQGYLGHPASDAVFFSFGVIKRATAFGGGVVRIGNKAILSAMQREEAQYPAQPAMTYLRRVFKCSMLLACTSPLLFGILVHLLGLFGVDHDKVIMKLSHGFPKKGMLKAIRHRPCVPLLQMLTWRIGRYTPDGVETRLRYCDRMLSLLDRALPRQQLRRQRDIVREQPLAVASNCRVQAGDVLPGIRAHRHTLWLFPVMVAGGSERADGVVEALLREGFDATRAPTSLVPIDRCLAVDKPSSEGSCLPRCSVMMDSLVYLPLLNNIPDSEWDRLA 3902
            N    LSVR+ FDL L  L LP  S I+ SA+TIPDM +I   HGL P+PVDLDP+TL P   +L   V  +S          RA+ VAH      +V M PI     +HGL++ EDCAQ F G +GY G P++D   FSFG IK ATA GG ++R+ ++A+L+ ++  +A+YP Q    Y  R+ K +   A + P ++G+L+ L    G D+D+++     GFP       IR +P   L+ +L  R+  Y    +E R      +  LL+  +                             V PG  A  H  W+FP++V    E    V+ AL   GFDAT+  +       C+    P   G    R +  +  +VYLPL   IPDS   R+A
Sbjct:   43 NTLACLSVRSGFDLLLATLGLPERSEILMSAMTIPDMARIVEHHGLTPVPVDLDPSTLGPSVESLCRAVSPSS----------RAIVVAHLCG--GRVPMEPILTLAGKHGLMVIEDCAQAFDG-RGYSGDPSADVSMFSFGPIKTATALGGALLRVRDRALLARLRARQAEYPVQRRSQYAGRLLKYAAFKALSGPTMYGLLLRLWQAMGRDYDRLVNGSVRGFPGPDFFARIRQQPSAALMALLERRLRTYDQGRLERRAAQGGLLARLLEPKV-----------------------------VCPGRAATPHNAWVFPILVDNPPE----VIAALRESGFDATQGHSM------CVVAPPPDRRGCEAVRAARFLSKIVYLPLYPEIPDSSLVRMA 389          
BLAST of mRNA_H-paniculata_contig3085.8349.1 vs. uniprot
Match: A0A8K1CHQ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHQ7_PYTOL)

HSP 1 Score: 211 bits (536), Expect = 1.600e-55
Identity = 155/502 (30.88%), Postives = 230/502 (45.82%), Query Frame = 3
Query: 2418 LERLSCLHPLAVVARKRLDISFYPDIAHAVKLSLAATFFPGSAGEAAREEASLDVSRTWLSSASILRSRGVEPRKQLHSCQTAAASSTATPTDAGDNVAPFLSVRTAFDLYLKALALPRGSRIVCSALTIPDMVKIFLEHGLVPLPVDLDPNTLAPDPGALESEVEKASGDRAEGSGTVRAVYVAHRIPLMSQVDMVPIAEAVARHGLLLWEDCAQVFTGLQGYLGHPASDAVFFSFGVIKRATAFGGGVVRIGNKAILSAMQREEAQYPAQPAMTYLRRVFKCSMLLACTSPLLFGILVHLLGLFGVDHDKVIMKLSHGFPKKGMLKAIRHRPCVPLLQMLTWRIGRYTPDGVETRLRYCDRMLSLLDRALPRQQLRRQRDIVREQPLAVASNCRVQAGDVLPGIRAHRHTLWLFPVMVAGGSERADGVVEALLREGFDATRAPTSLVPIDRCLAVDKPSSEGSCLPRCSVMMDSLVYLPLLNNIPDSEWDRLAMALARVL 3923
            LE  S   P AV  RK+LD++ Y DI   +K  +       + GE  REE    ++  W                                 DA       LSVRT FDL L+ L LP GS I+CSA+TIPDM+ +   HGLVP+P+DLDP+TLA DP  L S V          +   RA+ +AH    +  +    I +      L++ EDCAQ F G+  Y G   +D   FSFG IK ATAFGG ++R+ N +IL  M+R E++YP +    +L+R+ K   L   ++P L+G+L+H     G +HD VI     GF    ++  IR+RP +PLL +L  R+       +  R    +++++                 +++ P             ++PG +A  H  WL PV+V       + VV+ + ++GFD T   T L  I        P  E         +M +LVYLP+    P+   +++  +    L
Sbjct:   25 LEHYSANLPWAVFPRKKLDVT-YGDILSGIKSCM-------TLGEGQREEYERKIATHW---------------------------------DATGQSMVTLSVRTGFDLLLQVLKLPAGSEILCSAITIPDMIYLVRYHGLVPVPIDLDPDTLAIDPEKLRSAV----------TDKTRAIMIAHIFGTVHPLGA--ILDLAEELNLMVIEDCAQAFAGMD-YTGERGADVSMFSFGTIKTATAFGGAMIRVKNPSILEEMKRRESRYPTRSTTFFLKRLVKYGFLHGVSTPALYGLLLHGCRAVGANHDSVITAAIRGFSGGELVSLIRYRPSMPLLGLLHRRLTDVDDAYIHLRKSKSEQLMAA----------------IQDTP-----------NVLIPGYKAMNHYYWLCPVVVPS----PERVVKHMNQQGFDVTSGATQLAYIP------SPKGEVHDPVHAKQIMQNLVYLPITPETPNWAVEKMIQSFREAL 435          
BLAST of mRNA_H-paniculata_contig3085.8349.1 vs. uniprot
Match: W4FK79_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FK79_9STRA)

HSP 1 Score: 209 bits (532), Expect = 3.700e-55
Identity = 142/406 (34.98%), Postives = 205/406 (50.49%), Query Frame = 3
Query: 2721 LSVRTAFDLYLKALALPRGSRIVCSALTIPDMVKIFLEHGLVPLPVDLDPNTLAPDPGALESEVEKASGDRAEGSGTVRAVYVAHRIPLMSQVDMVPIAEAVARHGLLLWEDCAQVFTGLQGYLGHPASDAVFFSFGVIKRATAFGGGVVRIGNKAILSAMQREEAQYPAQPAMTYLRRVFKCSMLLACTSPLLFGILVHLLGLFGVDHDKVIMKLSHGFPKKGMLKAIRHRPCVPLLQMLTWRIGRYTPDGVETRLRYCDRMLSLLDRALPRQQLRRQRDIVREQPLAVASNCRVQAGDVLPGIRAHRHTLWLFPVMVAGGSERADGVVEALLREGFDATRAPTSLVPIDRCLAVDKPSSEGSCLPRCSVMMDSLVYLPLLNNIPDSEWDRLAMALARVLSINTS 3938
            LSVRT FDL+L+A+A P+GS I+CS++TIPDM+K+   HGLV +PVDLD NTLA     LE  V          +   + + VAH    ++ +D V  A A A H LLL EDCAQ + G   Y GH A+D   FSFG IK +TAFGGG++R+ ++AIL  M+     Y  +    +L R+ K S+L + T+P +FG+  H++   G   D+VI     GF    ++  IR RP +PLL +L  ++  +    V  R    + +  LL R +P                             +PG+ A  H  WLFPV+V         V  A++++GFD T   T L        V  P+           +M SLVYLP+   +P    +++A +LA  ++   S
Sbjct:   69 LSVRTGFDLFLQAMAFPKGSEIICSSITIPDMLKVIHHHGLVAVPVDLDENTLAMQMDVLERSV----------TANTKCILVAHVFGTLNNLDTVS-AFAKAHHILLL-EDCAQAYCG-PAYTGHRATDVALFSFGTIKTSTAFGGGMLRVSDRAILRKMRSINNSYEPRSRKFFLHRLLKYSVLHSLTTPAMFGLFFHVVSKLGYSADEVITSQIRGFAG-DLISGIRQRPSMPLLFLLRRKLTTFDMAYVAKRKTKSEELEQLL-RGIPH--------------------------TSVPGVLAKNHYYWLFPVLVPHPRH----VAAAMIQDGFDVTAGATQLA------FVPHPTDASFDPVISKKVMQSLVYLPVTAEMPRWALEKMAKSLAAAVASTPS 423          
BLAST of mRNA_H-paniculata_contig3085.8349.1 vs. uniprot
Match: A0A7X7F430_9BACT (DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7F430_9BACT)

HSP 1 Score: 208 bits (530), Expect = 6.300e-55
Identity = 140/400 (35.00%), Postives = 199/400 (49.75%), Query Frame = 3
Query: 2715 PFLSVRTAFDLYLKALALPRGSRIVCSALTIPDMVKIFLEHGLVPLPVDLDPNTLAPDPGALESEVEKASGDRAEGSGTVRAVYVAHRIPLMSQVDMVPIAEAVARHGLLLWEDCAQVFTGLQGYLGHPASDAVFFSFGVIKRATAFGGGVVRIGNKAILSAMQREEAQYPAQPAMTYLRRVFKCSMLLACTSPLLFGILVHLLGLFGVDHDKVIMKLSHGFPKKGMLKAIRHRPCVPLLQMLTWRIGRYTPDGVETRLRYCDRMLSLLDRALPRQQLRRQRDIVREQPLAVASNCRVQAGDVLPGIRAHRHTLWLFPVMVAGGSERADGVVEALLREGFDATRAPTSLVPIDRCLAVDKPSSEGSCLPR-CSVMMDSLVYLPLLNNIPDSEWDRLAMAL 3911
            P LSVRTAFDL  KAL  P GS +V SALTIPDMV+I   H LVP+P DL+   +APD  ++   +  A+          RA+ VAH     S++ + PI E   +HGLL+ EDCAQ F G   + GH  +D   FSFG IK ATAFGGGV R+G+  ILS M+   A+YP Q   +YL+R  K S+L   +   L   ++ +    G D+D+ I  +   FP    L  +RH+P  PLL +L  R+  +    +  R    +RM  L+                               G + P + A  H+ W+FP++    ++  D VV AL + GFDATR  +         AV+ P+      P     ++  +++LPL   +P  E +R+   L
Sbjct:   46 PCLSVRTAFDLLWKALDFPPGSEVVMSALTIPDMVRIVEHHRLVPVPADLNVADMAPDLDSIRRAITPAT----------RAIVVAHLFG--SRIPIEPILEIARQHGLLVIEDCAQAFAGCH-FDGHAGADVSMFSFGPIKTATAFGGGVFRVGDPRILSRMESLHAEYPVQSRGSYLKRFAKYSVLKGMSCRPLRDAILAVYRAAGFDYDRWISGVVRAFPGPKWLDRLRHQPSAPLLSLLERRLSTFDETWLAARTARGNRMARLMP-----------------------------DGAMRPAMNASEHSYWVFPIL----ADEPDRVVAALAQAGFDATRRSS-------LRAVEPPADRPELDPHHARDILSRMIFLPLCPEMPRREMERMGKIL 392          
BLAST of mRNA_H-paniculata_contig3085.8349.1 vs. uniprot
Match: K9TBL7_9CYAN (Putative PLP-dependent enzyme possibly involved in cell wall biogenesis n=1 Tax=Oscillatoria acuminata PCC 6304 TaxID=56110 RepID=K9TBL7_9CYAN)

HSP 1 Score: 207 bits (528), Expect = 9.680e-55
Identity = 145/422 (34.36%), Postives = 212/422 (50.24%), Query Frame = 3
Query: 2700 GDNVAPFLSVRTAFDLYLKALALPRGSRIVCSALTIPDMVKIFLEHGLVPLPVDLDPNTLAPDPGALESEVEKASGDRAEGSGTVRAVYVAHRIPLMSQVDMVPIAEAVARHGLLLWEDCAQVFTGLQGYLGHPASDAVFFSFGVIKRATAFGGGVVRIGNKAILSAMQREEAQYPAQPAMTYLRRVFKCSMLLACTSPLLFGILVHLLGLFGVDHDKVIMKLSHGFPKKGMLKAIRHRPCVPLLQMLTWRIGRYTPDGVETRLRYCDRMLSLLDRALPRQQLRRQRDIVREQPLAVASNCRVQAGDVLPGIRAHRHTLWLFPVMVAGGSERADGVVEALLREGFDATRAPTSLVPIDRCLAVDKPSSEGSCLPRCS-VMMDSLVYLPLLNNIPDSEWDRLAMALARVLSINTSTNSAEGGA 3962
            G+ VA  LSVR+ +DL L+AL LP GS +  SALTIPDMV I   HGLVP+P+DLDP T+APDP +L         DRA G  T R + +AH      +VD+ PI  A  R G +L EDCAQ FT   G+ GHP +D   FSFG IK ATA GG ++R+ +  +   +++ ++ YP Q +  Y RR+ K   L   +S   F  L+     +G+D+D+++ +   GFPK  ++  +RH+PC PLL +L  R+  YT   +  +     R++ LL    P+ Q+                          PG+    +  W+ P++    +E     +  L+  GFDAT+  +  V       VD P++     PR +  +   L+YLP    + D     +A AL  +     S  S  G A
Sbjct:   46 GETVA-CLSVRSGWDLLLQALQLPPGSEVAMSALTIPDMVTIVRAHGLVPVPIDLDPETMAPDPASL---------DRATGPRT-RVIIIAHLFG--GRVDLAPILAARDRVGAILVEDCAQAFT--PGFRGHPEADVSCFSFGTIKFATALGGALLRVRDPQLADCLRQIQSTYPVQDSGNYTRRLLKYLGLKTLSSRPGFTALIWGCRRWGIDYDRLLNQSVKGFPKDELIWRLRHQPCAPLLALLRHRLQGYTEQRLAEQTHRGQRLIQLLQEYCPQIQV--------------------------PGVATSPNMHWIVPIL----AEDPKLAIATLVNAGFDATQGHSMTV-------VDSPATHPEGEPRNTRELFQHLLYLPCYPAMDDQVLVSMAQALRPISFPLVSAFSRMGSA 415          
BLAST of mRNA_H-paniculata_contig3085.8349.1 vs. uniprot
Match: A0A355F2Z0_9BACT (Aminotransferase DegT n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A355F2Z0_9BACT)

HSP 1 Score: 205 bits (522), Expect = 4.080e-54
Identity = 145/408 (35.54%), Postives = 207/408 (50.74%), Query Frame = 3
Query: 2700 GDNVAPFLSVRTAFDLYLKALALPRGSRIVCSALTIPDMVKIFLEHGLVPLPVDLDPNTLAPDPGALESEVEKASGDRAEGSGTVRAVYVAHRIPLMSQVDMVPIAEAVARHGLLLWEDCAQVFTGLQGYLGHPASDAVFFSFGVIKRATAFGGGVVRIGNKAILSAMQREEAQYPAQPAMTYLRRVFKCSMLLACTSPLLFGILVHLLGLFGVDHDKVIMKLSHGFPKKGMLKAIRHRPCVPLLQMLTWRIGRYTPDGVETRLRYCDRMLSLLDRALPRQQLRRQRDIVREQPLAVASNCRVQAGDVLPGIRAHRHTLWLFPVMVAGGSERADGVVEALLREGFDATRAPTSLVPIDRCLAVDKPSSEGSCLP-RCSVMMDSLVYLPLLNNIPDSEWDRLAMALARV 3920
            GD+    LSVR+ FD  L  L  P GS ++ SA+TI DMV+I   HGLVP+PVDLDP +L   P +L+    +A G R+      RAV VAH     S++ + P+ +    HGL + ED AQ F  L   L  P +D   +SFG IK  TA  GG++   +  +L  ++R +  +P +   ++L R+ K S+L+A T P L+ + V L  L G  HD VI   + GFP  G L+ IRHRP  PLL +L  R+ R+ P  +  R    ++ ++    A+P   L R                        PG RA RHT W+FP++    +E    +V  L ++GFDATR  +SL        V  P+      P      M+ L+YLP+   +P     RLA ALA++
Sbjct:   41 GDHRLACLSVRSGFDALLTVLDYPPGSEVLVSAITIRDMVRIVEAHGLVPVPVDLDPRSLQVRPESLQ----RAIGPRS------RAVLVAHLFG--SRMPLEPVLDVARAHGLFVVEDGAQAFASLDA-LAPPQADVSLWSFGPIKTTTALAGGLLCFRDPRLLEQVRRHQDGWPERSRWSFLFRLLKYSVLMALTWPPLYTLFVALCRLAGKSHDAVISANTRGFPGDGFLQQIRHRPSTPLLALLARRLQRFDPAAIAARTAAAEQAMA----AMPF--LER------------------------PGDRAARHTHWVFPIL----NENPVALVNTLWKQGFDATRGASSLH------VVGPPADRPELAPVEAERTMERLLYLPVYPEVPQRTAGRLATALAKI 395          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3085.8349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4W2_9PHAE1.310e-17453.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI0019FC8CB64.400e-5934.91DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Chlo... [more]
D1C505_SPHTD4.570e-5938.44DegT/DnrJ/EryC1/StrS aminotransferase n=2 Tax=root... [more]
A0A7C7V0L3_9PLAN9.900e-5935.85DegT/DnrJ/EryC1/StrS aminotransferase family prote... [more]
A0A7V4HUR0_9BACT1.130e-5634.59DegT/DnrJ/EryC1/StrS aminotransferase family prote... [more]
A0A8K1CHQ7_PYTOL1.600e-5530.88Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W4FK79_9STRA3.700e-5534.98Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A7X7F430_9BACT6.300e-5535.00DegT/DnrJ/EryC1/StrS aminotransferase family prote... [more]
K9TBL7_9CYAN9.680e-5534.36Putative PLP-dependent enzyme possibly involved in... [more]
A0A355F2Z0_9BACT4.080e-5435.54Aminotransferase DegT n=1 Tax=Acidobacteria bacter... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3085contigH-paniculata_contig3085:7097..18186 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score531.6
Seed ortholog evalue4.8e-148
Seed eggNOG ortholog2880.D8LSA1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DegT/DnrJ/EryC1/StrS aminotransferase family
EggNOG OGs2RN8Q@2759,COG0399@1
Ec32 ortholog descriptionPyridoxal phosphate-dependent transferase
Ec32 orthologEc-12_004290.1
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size5225
Cds size1791
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3085.8349.1prot_H-paniculata_contig3085.8349.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3085 9424..17079 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929947.9526029-UTR-H-paniculata_contig3085:7096..94231622929947.9526029-UTR-H-paniculata_contig3085:7096..9423Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3085 7097..9423 +
1691481081.8974617-UTR-H-paniculata_contig3085:7096..94231691481081.8974617-UTR-H-paniculata_contig3085:7096..9423Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3085 7097..9423 +
1622929948.1138628-UTR-H-paniculata_contig3085:17079..181861622929948.1138628-UTR-H-paniculata_contig3085:17079..18186Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3085 17080..18186 +
1691481081.9944994-UTR-H-paniculata_contig3085:17079..181861691481081.9944994-UTR-H-paniculata_contig3085:17079..18186Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3085 17080..18186 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929947.97057-CDS-H-paniculata_contig3085:9423..97161622929947.97057-CDS-H-paniculata_contig3085:9423..9716Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 9424..9716 +
1691481081.9088945-CDS-H-paniculata_contig3085:9423..97161691481081.9088945-CDS-H-paniculata_contig3085:9423..9716Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 9424..9716 +
1622929947.990889-CDS-H-paniculata_contig3085:10304..106591622929947.990889-CDS-H-paniculata_contig3085:10304..10659Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 10305..10659 +
1691481081.9232235-CDS-H-paniculata_contig3085:10304..106591691481081.9232235-CDS-H-paniculata_contig3085:10304..10659Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 10305..10659 +
1622929948.0069-CDS-H-paniculata_contig3085:11038..112611622929948.0069-CDS-H-paniculata_contig3085:11038..11261Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 11039..11261 +
1691481081.941663-CDS-H-paniculata_contig3085:11038..112611691481081.941663-CDS-H-paniculata_contig3085:11038..11261Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 11039..11261 +
1622929948.027111-CDS-H-paniculata_contig3085:13407..135621622929948.027111-CDS-H-paniculata_contig3085:13407..13562Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 13408..13562 +
1691481081.9513357-CDS-H-paniculata_contig3085:13407..135621691481081.9513357-CDS-H-paniculata_contig3085:13407..13562Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 13408..13562 +
1622929948.049289-CDS-H-paniculata_contig3085:14409..144931622929948.049289-CDS-H-paniculata_contig3085:14409..14493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 14410..14493 +
1691481081.960258-CDS-H-paniculata_contig3085:14409..144931691481081.960258-CDS-H-paniculata_contig3085:14409..14493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 14410..14493 +
1622929948.0683715-CDS-H-paniculata_contig3085:14882..152201622929948.0683715-CDS-H-paniculata_contig3085:14882..15220Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 14883..15220 +
1691481081.9690194-CDS-H-paniculata_contig3085:14882..152201691481081.9690194-CDS-H-paniculata_contig3085:14882..15220Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 14883..15220 +
1622929948.0873704-CDS-H-paniculata_contig3085:15847..159671622929948.0873704-CDS-H-paniculata_contig3085:15847..15967Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 15848..15967 +
1691481081.9776134-CDS-H-paniculata_contig3085:15847..159671691481081.9776134-CDS-H-paniculata_contig3085:15847..15967Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 15848..15967 +
1622929948.1013176-CDS-H-paniculata_contig3085:16856..170791622929948.1013176-CDS-H-paniculata_contig3085:16856..17079Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 16857..17079 +
1691481081.9860535-CDS-H-paniculata_contig3085:16856..170791691481081.9860535-CDS-H-paniculata_contig3085:16856..17079Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3085 16857..17079 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3085.8349.1

>prot_H-paniculata_contig3085.8349.1 ID=prot_H-paniculata_contig3085.8349.1|Name=mRNA_H-paniculata_contig3085.8349.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=597bp
MRETQNEASEELDWWHDFSWTHGVGELLTALERLSCLHPLAVVARKRLDI
SFYPDIAHAVKLSLAATFFPGSAGEAAREEASLDVSRTWLSSASILRSRG
VEPRKQLHSCQTAAASSTATPTDAGDNVAPFLSVRTAFDLYLKALALPRG
SRIVCSALTIPDMVKIFLEHGLVPLPVDLDPNTLAPDPGALESEVEKASG
DRAEGSGTVRAVYVAHRIPLMSQVDMVPIAEAVARHGLLLWEDCAQVFTG
LQGYLGHPASDAVFFSFGVIKRATAFGGGVVRIGNKAILSAMQREEAQYP
AQPAMTYLRRVFKCSMLLACTSPLLFGILVHLLGLFGVDHDKVIMKLSHG
FPKKGMLKAIRHRPCVPLLQMLTWRIGRYTPDGVETRLRYCDRMLSLLDR
ALPRQQLRRQRDIVREQPLAVASNCRVQAGDVLPGIRAHRHTLWLFPVMV
AGGSERADGVVEALLREGFDATRAPTSLVPIDRCLAVDKPSSEGSCLPRC
SVMMDSLVYLPLLNNIPDSEWDRLAMALARVLSINTSTNSAEGGAIKLKE
KRKLKRGRPTVSQRLAAFALRLDTFVVSLLLLTVILPILVLVYLLV*
back to top

mRNA from alignment at H-paniculata_contig3085:7097..18186+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3085.8349.1 ID=mRNA_H-paniculata_contig3085.8349.1|Name=mRNA_H-paniculata_contig3085.8349.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11090bp|location=Sequence derived from alignment at H-paniculata_contig3085:7097..18186+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTGGTCTTCATATCGTGCTCTGCAGGCAATTCGATTTTCAATGAGGATC TAAGCCATTCTTGCAGCCCTCCGATAAACCTTGTAATAAAAGACATGCCG CGCGCTGTCTCACAAGTCTAATTCGATATCGAAACATCACAAACAACTGG TACAGGTGAATCAATTATTTCTTATCTCGTCTCCAATAATGTTTTTCTCT TCAAAACTGATAACATCCTAACTATTCAATAAGACCCACAAAATCATCAC GTGTCAATATCAGATGCTCATAAATCAATGACGCAGACCAAGACTCGTTA CATTTTTAAACATGGCAAATAAACCGGGCCAAGCCTTGCGTAGACGCCAC GGGAAAGACTTGATAAGTATCAGCGACAAAATCGTTGCAACAGGAAAACT CCCACTTGAATTAACCAACACCCTTGACATCCCAAACGCATTGGCATATA TGTAACCCTCATGGTGTTTGAAATTGCATACCAGCCCCGGTCCCCCCCGA ATAGTTTACATTTCAGCGGTGGCGCCAAACCGACCAACAGTAAGTTGCGA CAAATATTAATAAGATTAAAACGCAGCACTACGGTGATAAAAAAAAATGT GCCTACTTTTCTACTAAACAGCCACCAAATACCATCTCGAGCAGCAAAAA ATGTACCCATCTTCATACAGACGACATTTGAAATCACCCACGCACAGGTG CGAACTGGCTGTGGGCGGGCCGGCACGAGATTAGCCGAGTAAGGTCAGGG GTCAAGACATGTCACGAAAACATGTTTCCCCAAACGGAGGGTGACATAAA TCATTAGCACAAGAGTGTACGAAGGCGTGATAAAATATACGGATACCTGG CTCAACAGCACATATATCCATTGCTCGAAAAACCTCCACAGCTCTCTCCG CGCCGCCGCCGCCGCCCCGTTCGTTTACAGTACACCAACTAGTAACGATG AACCTCAACGTAACAGCAGTGAGAGTTTGCCGTATTCCCTGGCACATGGC CACAACAACAAAGAAACACCTACAGCAGGATCATCGCACTTCCTTCCATC GCCTCTATGCCCACATGCTCATCCCGCGTGCCACGATAGCGGAACCGTAC TTTAGAACGTTCCCAAGGCGATTCGAAGCTCCACAACTCTAAAATAATAT ACGTCAACTCTCTTGTTCCCGTACATGCAGAATTACTTTGTTCGACCAGT CAGTGTAAACAGATCGTCCATGATCCATCGTACCAAGTTCACAAGCAACG CCTTGGGAAAAAATATGACCGAACATAAAGAATTATTATCCAACTTCAGC ATTGGCACATAACATAATCACAAACATCGTGCGATAAAGATATGAATCAA ACACTAAATACTTCTTATGCAACTTTCAGAATTGCCAACGGGTTGGTGAG CTAAGTGTACCCCTGCCAAAATTCTACAATCTATAACACCAGCACACTTT CGATTATACCTGCGAATACGCGAACAGGCAAACGGAACTTACTGCGACTT CAAAGTTCTTTGCTCTACAGTTTCAGCGAGTAGTTTTGTTCGTTCTTCCA AAGCAACATAGGCTCGAAACGGATTGACCCGAAACATCCCAGCTCGCGTC ATCAGTCCGCTGTGCCTTGATGATACTCGATTGCCTTACAAGACGTGGAG AAATCTCTCGCTCTTCTACTCCCTTCCCCTCGCTCCCACCTACTTCCCCT TCTGCTGCTGGTGCTGGAGCTAGTACTGGTGTCATCGTGTGTTCGCTTGA TGTGCCCTGAGCAACGTTCGAATGTTCGTCGCTATCACCAATAGCATTGC CATTTTTCCCTGCTCCTTCGTTTCCCTTCTGTTCCTCCGCGCGTTCGTTG AGATGGTGCTTTGAGGCGGACACATCATTGTCGACAGTGTCCGATCTGCG AATCTCAACCGGTGATACTGTGCCACCGTTCGTACTCGAGGGCATGGAAA AGCACCCTTGCGCCAGCAAACAATCCGAGAGACCACAGAAAAAACGGGGC TCTCAACGACAAAGTCGCGACGCGTGCTTTTCTTGGTGCTTGAGCTAGGT ACAGTCAGGTGCACAGACCACTCTAATAGTGGCTGGAGACGACGGGAATA TTTGATCGTATAGCACAGTACTCTTGCAGTGAGTCCAGTAGCAAATGGTC ACCTCCTGTCTTTCACGAGCCTGCCCGGTCTGGTCCCTCGTCCTGTGACA TGCGTGTGTTCAATTGTTCAATTTGTCTCGGAGTTCAAGTCGAACACGGG GTCATTCTCCAATTCCAAACTTTTTGCTCAGAGCTATTGCCCCCACCGGG ACGCCTACATCTGTCGTGCCAATCGTTATGCGGGAGACACAAAATGAGGC ATCAGAGGAACTGGACTGGTGGCATGATTTTAGCTGGACTCATGGCGTGG GAGAACTGCTAACGGCACTGGAGCGATTGTCTTGCTTGCACCCTCTTGCC GTAGTGGCCAGGAAGAGATTGGACATTTCTTTCTATCCCGACATCGCGCA TGCGGTGAAGCTGAGCTTGGCGGCTACGTTTTTCCCGGGCAGCGCTGGAG AAGCCGCCCGTGAGGAGGCTTCGCTTGACGTTTCGCGCACGTGGTTATCG TCAGCTAGTATTTTGCGAAGGTCATAGTTTATCTATAATAGTAACAAGTA GCTTTTGCTGTGATCGCATGTCGTAACGAATGAAGCAATATCGGATCGTG TGACCGAAATTAGAACAGTTTCGCCTGATGAGGAATAAAAATTGGAGTAG CTACGCGTGATATGGAACTTTCAGTACTATCGCTCTTCCAGCTACTGCTG TTGCACCCCCCCGGACAAATACGAATAATTGCGATTATTTTAGACAAAAA AGTAAAAGCATTCGCCTGAGCTTCAGAATAAGCTCGTGTGTGCTCGTGTG TCCTATGTGGTCCGGACCATCCACAACTGCTAATAATACTCGTAAATCGA ATGAACAGGGGTGGTACTTTATTCTACTATAATAGTATGTATCCGTCCAT TATGAAATTTCGGCAAATACTTTCAGTTTTTTGTGAAAACCATATGCAAG TATTCGTAGGTGTCCAGGGGGTGTACTTTTGTCTGTACTTACACTGCAAC TATTTGAAAACCACCGGTCCCATGTGTTGGACTCCCCTTTCACACAACTC GTCCACACATGGAGCACGCCGCTCGTCCCCTTCACATCGGGTGTTCGTCC AATACAAGCAGGGGGGTTGAACCCCGGAAGCAGTTGCACTCCTGCCAGAC CGCCGCTGCCTCCAGCACGGCGACCCCAACAGACGCCGGGGATAACGTAG CCCCCTTCCTCTCTGTCCGTACCGCTTTCGACCTTTACTTGAAAGCTCTC GCGCTCCCGAGGGGAAGCCGCATTGTCTGCTCAGCCCTCACGATCCCTGA CATGGTCAAGATTTTCTTGGAACACGGGCTCGTGCCGTTACCGGTCGACC TCGACCCGAACACGCTAGCGCCGGATCCCGGAGCTCTGGAGTCTGAGGTG GAGAAAGCAAGCGGTGATCGTGCGGAGGGCAGCGGGACTGTGAGAGCAGT CTATGTGGCACATGTCTTCGGAGCGCAGGCGAGACGGCGATAATTTTACG AAGATGGACACTTGTTCTTCTTAAATAGCATGGCTACCTGGCGTACTTTG GTCTTATAATACGAGTATTTGTATTCACTGTATGGTGACCGTGTTACAGT TACATTGCCTTGACGGCATGTGCCGAGTCATGTGGTTTGTCGTTTTTGTT GCTCTTAGAATACTCGTGAATTTTAACACAGAAAAAAAACATCCTCCGAT GCGCACCTTGAATCCTGATTTGTCGGGATGTGGACAATTATGGTGAAAAT CGGTGTCAAGCCCTGGACCTAAAGGTGGTTGCTGTTGCTCGTGAGCAACA TTGAGATATATTATACTTTATCTGTGTATGGACAACGATGAGCGTATACC GTTGATGTCACAGGTGGATATGGTACCCATCGCGGAGGCAGTGGCTCGTC ACGGCCTCTTGCTCTGGGAAGACTGCGCGCAGGTGTTCACGGGACTTCAG GGATACCTGGGGCATCCCGCCAGCGACGCAGTGTTCTTCAGCTTCGGCGT CATCAAGCGGGCGACCGCTTTCGGAGGTGGCGTTGTGCGCATCGGAAATA AGGCCATCCTTTCAGGTGCAATTTGGTAAATTTGTAGTGATCTACCCTTG CTGCTATCGCTCCATTGCTTAAGTAGTGTATACGGCAACAGTCCAATGAA GTTGTGCTTCCTGGCGTGCGCTGTACAGGTGTATCTATATATTAGATATA TATATAGATATTGATAAATACACTTGTAAACTTCTTTGTTTTGTCCCCGG TCCCCGGGTTTGGGGGAATGGGCGTTTGGCGGGCGGGGAACATAACTGTG GCACAGTTAGCAGCAGTAAATTCACGGCAGTACAGTATGATTGTTTATAA CACAGTTACGTACACTTCAACAGTCAATTTACCGCATGACATGAAAACAA TAAATAGAACCAGTAGGGAGCCGAGGGGGAATACGGCACGGAAGGTTTTC TTGAACGTTGTCATTAGGGAAACGTGAATAAAGACGTGAGCCGCGGGTCC GTTCATTGGCCTACTCTATCAGGGTGTCATGAATCCAGTCGGTGACAAAT TTTACTGCCTACAAAAAAAATCACCCAGCCAAGCGTGACCAATACGTAAT TTAGTATAACTTGATGTCGGTGACGAAAGCAACAACCGAAAAAACATGCA ACGTGAAAAAAAAACACATCGGTACAATGATACCCCTGTTTGGTCTCTGG CCCCAAGCGTTGGGAGAGTCGGCATTTTGGCGGCCGGCGTTTCGACCGCA GGCAGGTGTTAGCCTCGATCTCCTCCCGTTCCTCACCCGAGATACAAACC TCATGTGGCAATCCCTGCTTGTGCAAAGGACTGTCTTCTGTGTCGGTGCA TTCAAGAGAGTCTGCCGTGCCCCTTCCCCCTTCCTTGCTGACTTTATTTT TGGTTTCTGGTGCAGGTGGCGATTTGATACTTGAAGTTTTCCGCGTGCTT TTCGCGCAATGTGTTCAACCACTCGGTGAATGGTCCAATAACAATCCCTT CGTAGATCAACTGTACCATTGGCTTTATTGCCTGTCCAAAGCACTGTCCT CCGCGGCTTACGTTTTTATTCCCCTTTCGCTGCATTCAGGAAAGCTTCCC GTGCCGTGTTTCCCTCGCCGTCCTTGTTTGCTGTGTTTTTGGTCTCAAGA GAGTCGTGTTTCCTTCGCTCCCTACTAACCCCCTGTTCATTGTTTCCATG TCATGTGGGCAAAATGACGGTTGAAGGTTGCCATGTGCTTTACCCCCAAT GTACATAAATGTGCTGTAAAGAGTCAAACTATACTGCCCTGAATATGCTG CTGCTAACTGAACCACAGTTGTTGTATTCCCCGCCCCCCTCTCCTGCTGG CTGTATCAGCTCTTCCCGTCTCCCCACCCCTACCTCTTCCGCTACCGCTA TACTCCTTTTTTGTCTCCGGCTATAAAACTTATTTTTTTGCTGCAGCTTT TGTCACCAACATCAATTTCTATTCTATTGTATTCAATATGTAGCACGTGT GAGATATTTGTTTTGTCATGTAGTTTGTTTTTCAGGCGGTGACTTTTATT CCGATACACGATGAGTTGCGTCATTACGTTTTCCCGCCGTGTTTTTTCTC CCCCCCTCGCTGGCTGTAGCTTTTGTTGCCGGCTGTCAACTTGTGTGTTT GCGTTGCTGGCTGTAATCTTTGCTTGCGACTACGTCGCTCCGTCTACGTG TTTGATGTTCCATCTGGACTGTTTAAACGGTCCTCTTAACGTTTAGGAAC TTTTTCGTCTCAACGCTTTTACTTCTTAAACCCCGGCGACAGGGCCCGGT TCACCGCATAAACACGCCAGGTTTAACGCGAAAAAATGTGCCCAACACTA ACGAATAACGTTCTGTGTTTCTTTCCGTTGGACTTGGCCATCCCTTCCCT GCTGCCTTTTACCACATCCCGAAGGGAAATCTTTGTATATATATATATGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTCTGT GTCTGTGCATGTTTTTGTTTACGTCCCGTGCCATCGTAGGACTTTTGCCG GCTTAACGACATGATGAGTTCGCCCCCTAGAAGAAGCGGCAAGTTCCTCC ACTTGGCTTGACAAACGTTAGCATGTTGGTCGTTTGGTGAACCAACGCTA CAATCGCAACACCTTCACCTGTCCTTCCCCTCGCCCCCATCCCTACCCCC CGTGTTGATAGCGATGCAGCGCGAAGAGGCTCAGTACCCAGCACAGCCAG CGATGACATACCTTCGCCGGGTGTTCAAGTGCTCCATGCTCTTGGCATGC ACTTCGCCGCTTCTGTTTGGCATCCTTGTCCATCTACTCGGGCTATTCGG AGTCGACCACGACAAGGTACGAGATCAAGGGGAGCCATAAGCGACCACAT GTTGGCTTTTGGGTGCAAAGTCGCGGGTCGTGGCGTCCAATCGCGAAAGA GTGATTTTGTTGCTGTGGGGGTGTTGTAATAAGCTCAGGCTCTACCGCTA GCCGCACTGACGCAAAATAGAAAGGGTTATCCAAGGTGCGCACCTTCACT GCGCTCGTTGAACGATTAGGTTTTTCGCTCGCGGTGAAGGCGGCGTCCTT GCCATGTGGCCCGATTTTATTCACACTATGCACGTGCCGTATGTATACAC TTCCTATGAGCCATGAGTAAAGTCGGTTGAGTATATATATATAGAGGCAC GTAACTATCTCCGTTTTTTTTTAGTAATTATCCTACATGCTTTTGGGGTT GATCGCCAGAATTTCACGGAAATAGGTGAAGTTCATCCGGAGCGGGCGCG GCGCAATATGAAGATGTCGGGCAAAAAAAGACCTCATTTTTCTCCCTTTT CGTATTTTCCTAATCGGAATAGCGCATATCAGTCTATCTGACTTTAATCT ATCCAAAGATTCCAACCACAGCCTCTGAACAGTCTCATGGCTGGAGATAT GATCCCCCAAACACAACCGACTCTACTTATTGTACAGGGGAAGTATACAG TAGCATCAATTAAAACGTAAAAACGCCCCATAAGGTCATATGTCTGGCTC GTGCAGCGTTGGAAGCTAACCTTGCAGTGTTGTTTTCAGACGGTCATTCA AATCTTTAACATTTTGCGCTCGTTTTACCTTTGTATGTCTGTATATACCG TTTACACACGCTCCTTCTGGGCGATGGTGACGTCGGCTGCTTGATTCTTG GGGCACTTCGCAGGTGATCATGAAGCTCAGCCACGGGTTCCCGAAAAAAG GCATGCTGAAAGCAATTCGGCATCGGCCCTGCGTTCCTCTTCTTCAGGTA ACGAGCGGGTTGGCGTTTTGGCTGGTCTCGTAGTACGATGGATTGCACCG TCAGGCGCTTAGTTTTTCTCAGGATGGATACCCCGTAGCCCCTCGCCGCT CGTCGGGTGCGTTCGCTGGTATTACGAAATGTTTTGCACAAAAGCGTGCA TTTTGCGCATTAAAGGCCAAATAGGTCTGTGTTTTTCCATGCCAGGAGGC CTCACGCATGAGTTATGTGAGTCACATGCTCTGAACCACCCCTACATCGT CAAAATATATGCGTCACAAACCCGTACTGTGCTGTACTGCAATACGTGTT GGGGGCGGAAAGTTGGACCGTACGTGTTCCCCGGTTATAGTAAACCTCGC CAGTTGAGTGCGTCGCATATTTGCCCACGTCGGCAGATGCTCACCTGGAG GATAGGACGCTACACCCCCGATGGCGTGGAGACACGTCTTCGTTACTGCG ATCGTATGCTTAGTCTTCTTGACCGCGCGTTACCACGACAACAATTACGA CGGCAACGGGATATTGTGAGAGAACAGCCGCTAGCGGTAGCCTCCAACTG CCGAGTGCAAGCGGGCGACGTTCTACCGGGAATAAGAGCGCACCGTCACA CGCTTTGGCTATTCCCAGTCATGGTGGCGGGAGGGTCAGAGAGGGCGGAT GGCGTGGTCGAAGCACTGTTGCGGGAAGGCTTCGACGCCACGCGGGCACC GACGTCGCTTGTGCCCATCGATCGGTGAGCAAGCTACTTACGTTCCATAG TTTCATTTATAAAGTATACCCTTGTACCGCGTGTTCCTATATCTTGTGTC CAGTCCCCATGCGTTCTTGCGCGGGCCAACGGAGACGCGAATGGATATGA AATTCGTGTACAACAACCCTGTGTCTCCTCAGGCAACGGCGTAATCGGCT CGTACGAAAAATTGTAGTCTGACTCCAGGTCCCACATTACGTGAAACCTT GCTTCCTGCTCGTACACTGTCCTGTAAGTGTTGATGTACACTGTCCATGC ACCCTACTAGTATATCTCCAGACTACCCTGATCATGAATTGATGGGGACG GTTGGTGATAGTGCTACGATAAGAATTGCGCTTGGGAAGAAGGTGTGTCC GGTGGAACGATACAGCGTCCGGGATGATTACGCTAACACGGAAATACAAT TTAGCGGTTGCGGTGGTACCCTCCATGATGATCCTTTTCTTCCCGTTCGG GCTTCTATGTTTGCGTTGTAGCAAACCCGCCACGTGGACTGCAGCTGGCG ACGAGAGACTGCGTCAGAAGGCGCAGCAGTCATGAACAACGCGCGTTGGT TGCTAAACCTTTTGTTGCTCTATTCTGCCACCCGTGTGCGGATGCTTCTA GATGCCTTGCGGTGGACAAGCCCTCCTCGGAGGGTTCCTGTCTCCCTAGA TGCTCGGTAATGATGGACTCCCTGGTGTACCTGCCACTGCTCAACAATAT ACCGGACTCTGAGTGGGATAGGTGCGGCATGTTGTGATCTCTAGCATTGT CGTCCTGCAATCGATAGAGGAGCCGCTTTTTTTAACGAAGGGGCCGCTTT GAGAAGGGGATTGGGATTTTCTGTTTTGGCATTTATTGCCCCTCCTTGAA CAGGAATCCCATTTCTACGCGTGGACTGAGCAGCTTTTAGGGGTGCACAA GCACATGTAGTTGACATGGTTTTGCTTCGCTTTATTGTTGTACCGCTTTT GCAAAGCGGCCTTCGTTAAACAAGTGACCCCCCCCTACCATAGGATGTCT CAGGTCGAGAGTACAGTAGCGCTTTGGAGTGCACTGGAAAGACTCAGCAT CGACACAACTCTACTGAAACTTGCGAGGAGACGTTGGGGTTTTCCAATGC ACTCCAGAGCGCTACCATATTCTTGAAGAACGCTAACCCAACATTGAAGA ACAGTGAGCACGACTCAAGTGCACTTGTATATAGCACATCCAATCCGCTA CGTTTTTCGTTGGTTGATGTGGTATCTATGGTACGTCTATTGACGGATCA ATTTCAGCCCGTAGTGGTCTAGGGTCAATTCCACATTAAATCCTTCGTGG CGCAAGATGGGCGCGAATCGACTGCTGTTGCTCTTTCGGCTGATGACAAA CACAGACGGATCAACCACTCAGCGCTCTTCTGAGACAGGGCAAGATGTCA CTCCCTCGCCTTCACACGCCCTCTATTATGGCTATTTTTCCAGCATATCA CTTCATGTTTGTCTGGAAAGCATAACCAAGAAGAAGATCCAAGAAAAACA CATCGTTAAAGTGCCTGCCCCGTAGGGGTTAATCAGCCTAAACAATTTAA CCGTATGTCGATATTCGCCGTTCCGATCTCCCGTGTTGACCTTGTTTTTT GCCCTTTCAGGTTGGCTATGGCACTTGCGCGAGTGCTGTCAATAAATACA TCAACCAACAGCGCTGAAGGGGGGGCTATCAAGCTGAAGGAGAAGCGCAA GCTCAAGAGGGGACGCCCTACAGTGTCTCAGCGACTCGCGGCCTTCGCGC TTCGCTTGGATACCTTTGTGGTGTCGTTGTTGTTGTTGACCGTGATACTC CCCATTTTGGTGCTGGTGTACCTTCTGGTGTGAGGTCGTGTTGTGTGTGC TCGTTGCCTTCTCATTCGATCGTGTGCCACGTCCGCAGATTATGGCTTTA GCATGTGCTTTTGTGTCAATGGTTCACGTGTATGCCGTGTGTGAGTTCCA TTTCTGTTAGTATCACCATACAACAAGGACATGGTGTACAGGATACAGGA TACTACCCAATGTTCACCATCAGGGTGGTTCTTTGAAATTCATTAGCTAT TGCCAACCAAGCTGACCCTTGGGTCCCCTGTAGGATGGTACACCTTTTGT TTATCCGCTTGCTATCTCGTGTGCGTTGCGACAGGAAAAAAATATAGTGT GTGCCGGAAGTCCTGCTTTTGCTTAGATTGGACCCGTTGGCAGCAGTGCG CGCCAAATTTACTTGTCTCATATCCAAGCCACGGGAACCCAAACCACGGA GTGACTTGGCTAATTGGAGAAATACTAATTAAACAGAAACGTAAAAACGC CGTAAGATTTCAGGTCTTGCTCTTGCATCGCTGCAAGCTAACTTGGCAGT GTTGTTGTTTCCAGCTCGGCCATTCAAATCTTCGGCACTTCGCGTATGTT TGGCCTGCTTTGGCTTTACCTGTTTAGTTGGAGAGCGTAGACCTGCAGTT TTGTTGGAGACCTTGTTGGTCGTGTAGCTAGGGCTAGTTGGTGTAAGCGT TGTTGCGGATTTAACTTTCGAGAAAGATGTAGCATCGGTACGTGAGCGTT ATGCATAACTTGGAATGGCCAGTCAATGCTGTGGCGACGGGGATGGTACA AAGTATTGGAATCCTGAGGCAGGTCTATCTATCTTCGGGTTGGCACATCC TGACTGAGTCCATCTTGGTTTTCGGGATGACGAGGTGATGAGGCAGGTGT GTAACCATCAACTGTTGAAGTCGCGCAATTTTTTTTCGTGGTCAGAGCCG ATCGATGTGGGTTCGAGTCGGCTCGTGTACGGATCAACCGTACACAAACA TGTGCGAACGATCCGGGACATATTGATCAGTTACGGCCAAACATTCACTT TAGATTCGTGCAGAGCATGAACGTAATACTATCTCTGTTCCGTAAGTCTC GCTTATAACGGTATTTTGTTATTATATTTTGCAATTTGGG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig3085:7097..18186+

>mRNA_H-paniculata_contig3085.8349.1 ID=mRNA_H-paniculata_contig3085.8349.1|Name=mRNA_H-paniculata_contig3085.8349.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3582bp|location=Sequence derived from alignment at H-paniculata_contig3085:7097..18186+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGGAGACACAAAATGAGGCATCAGAGGAACTGGACTGGTGGCATGA
TTTTAGCTGGACTCATGGCGTGGGAGAACTGCTAACGGCACTGGAGCGAT
TGTCTTGCTTGCACCCTCTTGCCGTAGTGGCCAGGAAGAGATTGGACATT
TCTTTCTATCCCGACATCGCGCATGCGGTGAAGCTGAGCTTGGCGGCTAC
GTTTTTCCCGGGCAGCGCTGGAGAAGCCGCCCGTGAGGAGGCTTCGCTTG
ACGTTTCGCGCACGTGGTTATCGTCAGCTAGTATTTTGCGAAGATGCGGG
AGACACAAAATGAGGCATCAGAGGAACTGGACTGGTGGCATGATTTTAGC
TGGACTCATGGCGTGGGAGAACTGCTAACGGCACTGGAGCGATTGTCTTG
CTTGCACCCTCTTGCCGTAGTGGCCAGGAAGAGATTGGACATTTCTTTCT
ATCCCGACATCGCGCATGCGGTGAAGCTGAGCTTGGCGGCTACGTTTTTC
CCGGGCAGCGCTGGAGAAGCCGCCCGTGAGGAGGCTTCGCTTGACGTTTC
GCGCACGTGGTTATCGTCAGCTAGTATTTTGCGAAGCAGGGGGGTTGAAC
CCCGGAAGCAGTTGCACTCCTGCCAGACCGCCGCTGCCTCCAGCACGGCG
ACCCCAACAGACGCCGGGGATAACGTAGCCCCCTTCCTCTCTGTCCGTAC
CGCTTTCGACCTTTACTTGAAAGCTCTCGCGCTCCCGAGGGGAAGCCGCA
TTGTCTGCTCAGCCCTCACGATCCCTGACATGGTCAAGATTTTCTTGGAA
CACGGGCTCGTGCCGTTACCGGTCGACCTCGACCCGAACACGCTAGCGCC
GGATCCCGGAGCTCTGGAGTCTGAGGTGGAGAAAGCAAGCGGTGATCGTG
CGGAGGGCAGCGGGACTGTGAGAGCAGTCTATGTGGCACATCAGGGGGGT
TGAACCCCGGAAGCAGTTGCACTCCTGCCAGACCGCCGCTGCCTCCAGCA
CGGCGACCCCAACAGACGCCGGGGATAACGTAGCCCCCTTCCTCTCTGTC
CGTACCGCTTTCGACCTTTACTTGAAAGCTCTCGCGCTCCCGAGGGGAAG
CCGCATTGTCTGCTCAGCCCTCACGATCCCTGACATGGTCAAGATTTTCT
TGGAACACGGGCTCGTGCCGTTACCGGTCGACCTCGACCCGAACACGCTA
GCGCCGGATCCCGGAGCTCTGGAGTCTGAGGTGGAGAAAGCAAGCGGTGA
TCGTGCGGAGGGCAGCGGGACTGTGAGAGCAGTCTATGTGGCACATCGTA
TACCGTTGATGTCACAGGTGGATATGGTACCCATCGCGGAGGCAGTGGCT
CGTCACGGCCTCTTGCTCTGGGAAGACTGCGCGCAGGTGTTCACGGGACT
TCAGGGATACCTGGGGCATCCCGCCAGCGACGCAGTGTTCTTCAGCTTCG
GCGTCATCAAGCGGGCGACCGCTTTCGGAGGTGGCGTTGTGCGCATCGGA
AATAAGGCCATCCTTTCAGCGTATACCGTTGATGTCACAGGTGGATATGG
TACCCATCGCGGAGGCAGTGGCTCGTCACGGCCTCTTGCTCTGGGAAGAC
TGCGCGCAGGTGTTCACGGGACTTCAGGGATACCTGGGGCATCCCGCCAG
CGACGCAGTGTTCTTCAGCTTCGGCGTCATCAAGCGGGCGACCGCTTTCG
GAGGTGGCGTTGTGCGCATCGGAAATAAGGCCATCCTTTCAGCGATGCAG
CGCGAAGAGGCTCAGTACCCAGCACAGCCAGCGATGACATACCTTCGCCG
GGTGTTCAAGTGCTCCATGCTCTTGGCATGCACTTCGCCGCTTCTGTTTG
GCATCCTTGTCCATCTACTCGGGCTATTCGGAGTCGACCACGACAAGCGA
TGCAGCGCGAAGAGGCTCAGTACCCAGCACAGCCAGCGATGACATACCTT
CGCCGGGTGTTCAAGTGCTCCATGCTCTTGGCATGCACTTCGCCGCTTCT
GTTTGGCATCCTTGTCCATCTACTCGGGCTATTCGGAGTCGACCACGACA
AGGTGATCATGAAGCTCAGCCACGGGTTCCCGAAAAAAGGCATGCTGAAA
GCAATTCGGCATCGGCCCTGCGTTCCTCTTCTTCAGGTGATCATGAAGCT
CAGCCACGGGTTCCCGAAAAAAGGCATGCTGAAAGCAATTCGGCATCGGC
CCTGCGTTCCTCTTCTTCAGATGCTCACCTGGAGGATAGGACGCTACACC
CCCGATGGCGTGGAGACACGTCTTCGTTACTGCGATCGTATGCTTAGTCT
TCTTGACCGCGCGTTACCACGACAACAATTACGACGGCAACGGGATATTG
TGAGAGAACAGCCGCTAGCGGTAGCCTCCAACTGCCGAGTGCAAGCGGGC
GACGTTCTACCGGGAATAAGAGCGCACCGTCACACGCTTTGGCTATTCCC
AGTCATGGTGGCGGGAGGGTCAGAGAGGGCGGATGGCGTGGTCGAAGCAC
TGTTGCGGGAAGGCTTCGACGCCACGCGGGCACCGACGTCGCTTGTGCCC
ATCGATCGATGCTCACCTGGAGGATAGGACGCTACACCCCCGATGGCGTG
GAGACACGTCTTCGTTACTGCGATCGTATGCTTAGTCTTCTTGACCGCGC
GTTACCACGACAACAATTACGACGGCAACGGGATATTGTGAGAGAACAGC
CGCTAGCGGTAGCCTCCAACTGCCGAGTGCAAGCGGGCGACGTTCTACCG
GGAATAAGAGCGCACCGTCACACGCTTTGGCTATTCCCAGTCATGGTGGC
GGGAGGGTCAGAGAGGGCGGATGGCGTGGTCGAAGCACTGTTGCGGGAAG
GCTTCGACGCCACGCGGGCACCGACGTCGCTTGTGCCCATCGATCGATGC
CTTGCGGTGGACAAGCCCTCCTCGGAGGGTTCCTGTCTCCCTAGATGCTC
GGTAATGATGGACTCCCTGGTGTACCTGCCACTGCTCAACAATATACCGG
ACTCTGAGTGGGATAGATGCCTTGCGGTGGACAAGCCCTCCTCGGAGGGT
TCCTGTCTCCCTAGATGCTCGGTAATGATGGACTCCCTGGTGTACCTGCC
ACTGCTCAACAATATACCGGACTCTGAGTGGGATAGGTTGGCTATGGCAC
TTGCGCGAGTGCTGTCAATAAATACATCAACCAACAGCGCTGAAGGGGGG
GCTATCAAGCTGAAGGAGAAGCGCAAGCTCAAGAGGGGACGCCCTACAGT
GTCTCAGCGACTCGCGGCCTTCGCGCTTCGCTTGGATACCTTTGTGGTGT
CGTTGTTGTTGTTGACCGTGATACTCCCCATTTTGGTGCTGGTGTACCTT
CTGGTGTGAGTTGGCTATGGCACTTGCGCGAGTGCTGTCAATAAATACAT
CAACCAACAGCGCTGAAGGGGGGGCTATCAAGCTGAAGGAGAAGCGCAAG
CTCAAGAGGGGACGCCCTACAGTGTCTCAGCGACTCGCGGCCTTCGCGCT
TCGCTTGGATACCTTTGTGGTGTCGTTGTTGTTGTTGACCGTGATACTCC
CCATTTTGGTGCTGGTGTACCTTCTGGTGTGA
back to top