prot_H-paniculata_contig30806.8347.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30806.8347.1
Unique Nameprot_H-paniculata_contig30806.8347.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length104
Homology
BLAST of mRNA_H-paniculata_contig30806.8347.1 vs. uniprot
Match: UPI000E6F524C (uncharacterized protein LOC113279956 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6F524C)

HSP 1 Score: 85.5 bits (210), Expect = 2.290e-19
Identity = 48/104 (46.15%), Postives = 68/104 (65.38%), Query Frame = 0
Query:    1 PKSYRDVLESKYKSVFLEAMDREMIVLKEAGTFVETELPVGRKAIGSKWVLTWKTDQDGSILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSRLAAAHACRK 104
            PKS+R+ +  KY   + +AM  E+  L+E GT+  TELP G+KA+GSKW+ T K D++G +++ KAR V  GN QV G+DY++TFAP     T R+  A A  K
Sbjct:   18 PKSFREAM--KYPG-WKKAMAEEIRALEEQGTWDLTELPPGKKALGSKWIYTEKYDENGKLVRLKARLVIFGNHQVEGLDYNETFAPVANMTTVRMFLAVAAAK 118          
BLAST of mRNA_H-paniculata_contig30806.8347.1 vs. uniprot
Match: UPI000B8A78E3 (uncharacterized protein LOC110797998 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8A78E3)

HSP 1 Score: 84.7 bits (208), Expect = 4.760e-17
Identity = 42/95 (44.21%), Postives = 65/95 (68.42%), Query Frame = 0
Query:    1 PKSYRDVLESKYKSVFLEAMDREMIVLKEAGTFVETELPVGRKAIGSKWVLTWKTDQDGSILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSR 95
            PKS+++ ++ +    + +A+  E+  L+  GT+V  ELP G+KA+GSKWV T K D+DG++++  AR VCLGN QV G DY+++FAP    +T R
Sbjct:  306 PKSFKEAMKHE---AWRKAIGAEIDALEGQGTWVLQELPPGKKALGSKWVYTEKRDEDGNLIRNNARLVCLGNHQVEGTDYNESFAPVAKMSTVR 397          
BLAST of mRNA_H-paniculata_contig30806.8347.1 vs. uniprot
Match: UPI000E6F64D6 (uncharacterized protein LOC113273194 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6F64D6)

HSP 1 Score: 84.7 bits (208), Expect = 5.840e-17
Identity = 45/104 (43.27%), Postives = 69/104 (66.35%), Query Frame = 0
Query:    1 PKSYRDVLESKYKSVFLEAMDREMIVLKEAGTFVETELPVGRKAIGSKWVLTWKTDQDGSILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSRLAAAHACRK 104
            P+++R+ ++      + +AM  E+  L+E GT+  TELP G+KA+GSKW+ T K D++G++++ KARFV  GN QV G+DY++TFAP     T R+  A A  K
Sbjct:  695 PRNFREAMKH---PGWRKAMAEEIRALEEQGTWDLTELPPGKKALGSKWIYTEKYDENGTLVRLKARFVIFGNHQVEGLDYNETFAPVAKMTTVRMFLAVAAAK 795          
BLAST of mRNA_H-paniculata_contig30806.8347.1 vs. uniprot
Match: UPI000E6F8969 (uncharacterized protein LOC113296259 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6F8969)

HSP 1 Score: 83.6 bits (205), Expect = 1.450e-16
Identity = 45/104 (43.27%), Postives = 68/104 (65.38%), Query Frame = 0
Query:    1 PKSYRDVLESKYKSVFLEAMDREMIVLKEAGTFVETELPVGRKAIGSKWVLTWKTDQDGSILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSRLAAAHACRK 104
            P+++R+ ++      + +AM  E+  L+E GT+  TELP G+KA+GSKW+ T K D++GS+++ KAR V  GN QV G+DY++TFAP     T R+  A A  K
Sbjct:  388 PRNFREAMKH---PGWRKAMAEEIRALEEQGTWDLTELPPGKKALGSKWIYTEKYDENGSLVRLKARLVIFGNHQVEGLDYNETFAPVAKMTTVRMFLAVAAAK 488          
BLAST of mRNA_H-paniculata_contig30806.8347.1 vs. uniprot
Match: A0A6H5JXX7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXX7_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.630e-16
Identity = 47/105 (44.76%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    1 PKSYRDVLESKYKSVFLEAMDREMIVLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGSILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSRLAAAHACRK 104
            P +YRDV+ SKYK  +  AM +E+    + GTF +  ELP GRKAIGSKWV +WKT++ G I+  KAR V  G  Q+ G+D+  + +  P+ A+ + A A A  K
Sbjct:  308 PMTYRDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFYHSSSACPSAASIKTAIAVATEK 412          
BLAST of mRNA_H-paniculata_contig30806.8347.1 vs. uniprot
Match: A0A6P6WUD4_COFAR (uncharacterized protein LOC113736273 n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6WUD4_COFAR)

HSP 1 Score: 77.4 bits (189), Expect = 3.890e-16
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0
Query:    1 PKSYRDVLESKYKSVFLEAMDREMIVLKEAGTFVETELPVGRKAIGSKWVLTWKTDQDGSILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSR 95
            P S+++ ++  Y   + EAM +E+  L++ G +    LP+G+KA+GSKWV   K   DG+I + KAR V  GN Q+ G+DY +TFAPT    T R
Sbjct:   23 PTSFKEAMQHSY---WREAMRKEVEALEDNGIWTVATLPMGKKALGSKWVYKIKYHTDGTIERYKARLVVFGNYQIEGLDYTETFAPTAKIVTVR 114          
BLAST of mRNA_H-paniculata_contig30806.8347.1 vs. uniprot
Match: UPI000B8A7035 (uncharacterized protein LOC110788974 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8A7035)

HSP 1 Score: 82.0 bits (201), Expect = 5.160e-16
Identity = 42/95 (44.21%), Postives = 64/95 (67.37%), Query Frame = 0
Query:    1 PKSYRDVLESKYKSVFLEAMDREMIVLKEAGTFVETELPVGRKAIGSKWVLTWKTDQDGSILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSR 95
            PK++++ ++ K    + +AM  E+  L+   T+V  +LP G+KA+GSKWV T K D+DG++++ KAR V LGN QV G DY++TFAP    +T R
Sbjct:  519 PKTFKEAMKHK---AWRDAMAAEIEALEGQATWVLEKLPPGKKALGSKWVYTEKKDEDGNLIRNKARLVFLGNHQVEGTDYNETFAPVAKMSTVR 610          
BLAST of mRNA_H-paniculata_contig30806.8347.1 vs. uniprot
Match: A0A6H5LAZ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAZ3_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 6.100e-16
Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    3 SYRDVLESKYKSVFLEAMDREMIVLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGSILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSRLAAAHACRK 104
            +Y+DV+ SKYK  +  AM +E+    + GTF +  ELP GRKAIGSKWV +WKT++ G I+  KAR V  G  ++ G+D+  + + +P+ A+ +   A A  K
Sbjct:    2 TYKDVMCSKYKVFWEAAMKKEIDDHDKTGTFTKVKELPDGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSEIPGIDFHHSSSASPSAASIKTVIAVATEK 104          
BLAST of mRNA_H-paniculata_contig30806.8347.1 vs. uniprot
Match: A0A6H5KPX2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX2_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 6.230e-16
Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = 0
Query:    1 PKSYRDVLESKYKSVFLEAMDREMIVLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGSILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSRLAAAHACRK 104
            P +Y+DV+ SKYK  +  AM +E+    + GTF +  ELP GRKAIGSKWV +WKT++ G I+  KAR V  G  Q+ G+D+  + +  P+ A+ +   A A  K
Sbjct:  108 PMTYKDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEK 212          
BLAST of mRNA_H-paniculata_contig30806.8347.1 vs. uniprot
Match: A0A6H5JRB0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB0_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 9.270e-16
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    1 PKSYRDVLESKYKSVFLEAMDREMIVLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGSILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSRLAAAHACRK 104
            P +Y+DV+ SKYK  +  AM  E+    + GTF +  ELP GRKAIGSKWVL+WKT + G I+  KAR V  G  Q+ G+D+  + +  P+ A+ +   A A  K
Sbjct:  108 PMTYKDVMCSKYKVFWEAAMKNEIDGHDKTGTFTKVKELPEGRKAIGSKWVLSWKTSEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAAATEK 212          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30806.8347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000E6F524C2.290e-1946.15uncharacterized protein LOC113279956 n=1 Tax=Papav... [more]
UPI000B8A78E34.760e-1744.21uncharacterized protein LOC110797998 n=1 Tax=Spina... [more]
UPI000E6F64D65.840e-1743.27uncharacterized protein LOC113273194 n=1 Tax=Papav... [more]
UPI000E6F89691.450e-1643.27uncharacterized protein LOC113296259 n=1 Tax=Papav... [more]
A0A6H5JXX7_9PHAE3.630e-1644.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6P6WUD4_COFAR3.890e-1642.11uncharacterized protein LOC113736273 n=1 Tax=Coffe... [more]
UPI000B8A70355.160e-1644.21uncharacterized protein LOC110788974 n=1 Tax=Spina... [more]
A0A6H5LAZ3_9PHAE6.100e-1641.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPX2_9PHAE6.230e-1642.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRB0_9PHAE9.270e-1643.81Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 36..101
e-value: 6.6E-12
score: 45.6
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 11..101
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 11..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30806contigH-paniculata_contig30806:1422..1733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30806.8347.1mRNA_H-paniculata_contig30806.8347.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30806 1422..1733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30806.8347.1 ID=prot_H-paniculata_contig30806.8347.1|Name=mRNA_H-paniculata_contig30806.8347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
PKSYRDVLESKYKSVFLEAMDREMIVLKEAGTFVETELPVGRKAIGSKWV
LTWKTDQDGSILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSRLAAAH
ACRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like