mRNA_H-paniculata_contig3078.8337.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3078.8337.1 vs. uniprot
Match: D7FHQ5_ECTSI (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ5_ECTSI) HSP 1 Score: 427 bits (1097), Expect = 2.220e-143 Identity = 269/443 (60.72%), Postives = 304/443 (68.62%), Query Frame = 1
Query: 16 VVYPEAEDDGKPKVFARQSFVVSGEEEEMAETILKARMLAGQRRRSTIVVDPNLDSNNQRAIVDAAACNLAARRDSASDSAALTETAGEAETEEGQSGSTKDGEALTSNVDSEVARRRSSVLQRIPDNLRALVQQSDASGVQQKTEIPYVPPSPQQAVPASPSATAARQT--------SGDRASNSGGGGRPVWLRNMLHFLRRKGNTASRNKSNNNPRSSDKSDGHGDDGRYTPEASPYPAP----EQEQPLLGPQLPKFAGRKQLILDLDETLVHSSFKPVAGADYIMDIKVDSTYYKVFVRKRPGVDEFLRRVARDYEVIIFTASLPQYANPLLDLLDPTRRITSRLFREHCTFHEGYFVKDLTRLRFQSLESTIIVDNSPMAYMFQPENAIDCMSWIDEQDDRELYVIADFLEAVVGVPDVRDLLEFWREGSHILQPAS 1308
VVYPE D GKPKVFARQSFV SGEEEEMA+TIL+AR LAGQRRRST + + A V A NLAARRDS SAA T A A G A+ VARRRSSV+ ++PDNLRALVQQSDASGVQ+KTE PY +PQ A T T +G +++G WL N++ F+R K K N+ R G G++G TP SP P ++ + LL QLP+FAGRKQLILDLDETLVHSSFKPV GAD+IMDI VD T+YKVFV KRPGVD FL RVA+ YEVIIFTASLPQYANPLLD+LDP ITSRLFREHCTFHEGYFVKDLT LR QSLESTIIVDNSPMAYMFQPENAIDC+SWID+++D EL VIA FLE +V VPDVRDLLEFWREG+ +L S
Sbjct: 59 VVYPEKHDAGKPKVFARQSFVASGEEEEMADTILQARQLAGQRRRSTFNANKKTAREGEIAQV---AQNLAARRDS---SAAATVNA--AAGXXXXXXXXXAGVAVDPADADAVARRRSSVM-KLPDNLRALVQQSDASGVQKKTESPY---NPQGASDDKAQTTTTDNTXXXXXLNNTGSSTASTGSTRGRGWLSNVMTFIRWK-------KVPNSDRKRASRGGGGEEGG-TPGLSPTPGKGGLGKKRRSLLPKQLPEFAGRKQLILDLDETLVHSSFKPVPGADFIMDIMVDGTFYKVFVLKRPGVDAFLERVAKLYEVIIFTASLPQYANPLLDVLDPKGTITSRLFREHCTFHEGYFVKDLTLLRHQSLESTIIVDNSPMAYMFQPENAIDCISWIDDREDTELDVIASFLETIVDVPDVRDLLEFWREGAAVLDNIS 481
BLAST of mRNA_H-paniculata_contig3078.8337.1 vs. uniprot
Match: A0A836CEE7_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEE7_9STRA) HSP 1 Score: 339 bits (869), Expect = 5.390e-109 Identity = 227/477 (47.59%), Postives = 277/477 (58.07%), Query Frame = 1
Query: 4 RASFVVYPEAEDDGKPKVFARQSFVVSGEEEEMAETILKARMLAGQRRRSTIVVDPNLDSNNQRAIVDAAACNLAARRDSASDSAALTETAGEAETEEGQSGSTKDG-------------EALTSNVDSEVARRRSSVLQRIPDNLRALVQQSDASGVQQK--------------------------TEIPYVPPSPQQAVPASPSATAARQTSGDRASNSGGGGRPVWLRNMLHFLRR--KGNTASRNKSNNNPRSSDKSDGHGDDGRYTPEASPYPAPEQEQPLLGPQLPKFAGRKQLILDLDETLVHSSFKPVAGADYIMDIKVDSTYYKVFVRKRPGVDEFLRRVARDYEVIIFTASLPQYANPLLDLLDPTRRITSRLFREHCTFHEGYFVKDLTRLRF-QSLESTIIVDNSPMAYMFQPENAIDCMSWIDEQDDRELYVIADFLEAVVGVPDVRDLLEFWREGSHILQPAS 1308
R+ VV+PEA D+GKPK+FARQSF+V+ + E MAETIL+AR LA +RRRS + D + ARR SA D AA E ++D RRRSS +Q++P LRAL+QQSD +G+QQK T + + ++++ S A + +Q S AS SGG G W M+ +R + N ++ + G G +T PA LL PQ +FAGRK L+LDLDETLVHSSFKPV +DYI+DI VDST YKVFV KRPGVDEFL RV++DYEVIIFTASLPQYANPLLD+LDP IT RLFREHCTFHEGYFVKDLT LR ++L TIIVDNSPMAYMFQP+NAIDC SW+++ D ELYVIADFLE V DVRD +EFWREG+ +L P S
Sbjct: 32 RSGSVVFPEATDEGKPKLFARQSFLVTADNEAMAETILEARKLAMERRRS---------------VADDGGVHALARRASADDKAAAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDKPHLDE---RRRSSAIQKLPPQLRALMQQSDENGIQQKXXXXXXXXXXXXXXXXXXXXXXHHQLTGVQEAADAEEESIHVS--ADSPKQQS-QSASGSGGNG---WYTTMVSCFKRSDEANDDAKAATXXXXXXXXXXXGSGKGKTFTTSEPTVPAS-----LLPPQAKQFAGRKLLVLDLDETLVHSSFKPVPTSDYILDIMVDSTAYKVFVLKRPGVDEFLERVSKDYEVIIFTASLPQYANPLLDMLDPKGYITGRLFREHCTFHEGYFVKDLTLLRNNKNLSDTIIVDNSPMAYMFQPDNAIDCTSWLEDPVDEELYVIADFLEKTKDVTDVRDYVEFWREGAEVLSPVS 479
BLAST of mRNA_H-paniculata_contig3078.8337.1 vs. uniprot
Match: A0A835YRL6_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL6_9STRA) HSP 1 Score: 265 bits (678), Expect = 4.990e-80 Identity = 215/527 (40.80%), Postives = 253/527 (48.01%), Query Frame = 1
Query: 1 RRASFVVYPEAEDDGKPKVFARQSFVVSGEEEEMAETILKARMLAGQRRRSTIVVDPNLDSNNQRAIVDAAACNLAARRDSASDSAALTETAGEAETEEGQSGSTKDGEALTSNVDSEVARRRSSVLQRIPDNLRALVQQSDASGVQQKTEIPYVPPSPQQAVPASPSATAARQTSGDRASNSGGGGRPVWLRNMLHFLRRKGNTASRNKSNNNPRSSDKSDGHGDDGRYTPEASPYPAPEQ-------------EQPLLGPQ--------LPK-FAGRKQLILDLDETLVHSSFKPVAGADYIMDIKVDSTYYK----------------------VFVRKRPGVDEFLRRVARDYEVIIFTASLPQYANPLLDLLDPTRRITSRLFREHCTFHEGYFVKD----------------------LTRLRFQS-LESTIIVDNSPMAYMFQPENAIDCMSWID-------------------------EQDDRELYVIADFLEAVVGVPDVRDLLEFWREGSHILQPA 1305
R S +V PEA D GKPK+FARQSF+V+ + E MAETIL+AR LA +RRRS + D + ARR SA +D RRRSSV+Q +P +LRAL+QQSD +GVQQK + P+ AA R P L + L + + S PR+ E+ LLGPQ PK F GRK L+LDLDETLVHSSFKPV +DYI+DI VD T YK VFV KRPGVDEFL RV++DYEVIIFTASLPQYANPLLD LDP IT+RLFREHCTFHEGYFV LT LR + L TIIVDNSPMAYMFQP+NAIDC SW++ + D ELYVIA FLE + GVP+VRD +EFWREGS ++ PA
Sbjct: 30 RSGSVLVLPEASDIGKPKLFARQSFLVTADNEAMAETILEARKLAIERRRS---------------VADDGGVHALARRASAXXXXXXXXXXXX------XXXXXXXXXXXXPRMDE---RRRSSVIQILPPHLRALMQQSDENGVQQKWARGW------------PALGAALS----RKLRQMWDAPPPSLHHQLTNVAESPDVEEA--STRTPRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESLLGPQPKLAWPGLRPKRFVGRKLLVLDLDETLVHSSFKPVPKSDYILDIMVDDTPYKLGMRGSRRDRARAAETHGRVGCVFVLKRPGVDEFLERVSKDYEVIIFTASLPQYANPLLDRLDPKGLITARLFREHCTFHEGYFVXXXXXXXXXXXXXXXXXXXXXXXXLTLLRNNTNLSDTIIVDNSPMAYMFQPDNAIDCTSWLELRRALSLRCVRARRSSDVSRAREHEDPMDEELYVIAAFLERIRGVPEVRDYVEFWREGSEVMDPA 514
BLAST of mRNA_H-paniculata_contig3078.8337.1 vs. uniprot
Match: A0A7S2I1W8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I1W8_9STRA) HSP 1 Score: 207 bits (528), Expect = 7.210e-61 Identity = 104/190 (54.74%), Postives = 135/190 (71.05%), Query Frame = 1
Query: 736 LLGPQLPKFAGRKQLILDLDETLVHSSFKPVAGADYIMDIKVDSTYYKVFVRKRPGVDEFLRRVARDYEVIIFTASLPQYANPLLDLLDPTRRITSRLFREHCTFHEGYFVKDLTRLRFQSLESTIIVDNSPMAYMFQPENAIDCMSWIDEQDDRELYVIADFLEAVVGVPDVRDLLEFWREGSHILQPA 1305
LL P G+K L+LDLDETLVHSSF+ VAGAD+++ ++++ + V+V KRPGVD FL +A+ YE+I++TASL +YA+PLLDLLDP R I +RLFRE C ++EG +VKDL+ L + L IIVDNSP +Y+F PENAIDC S+ID+ DREL I FL V V DVRD+ WRE +I P
Sbjct: 55 LLPKHHPDDQGKKCLVLDLDETLVHSSFRAVAGADFVIPVQIEDVVHFVYVAKRPGVDSFLTEMAKHYEIIVYTASLNKYADPLLDLLDPNRVIRTRLFRESCVYYEGNYVKDLSLLD-RDLSQAIIVDNSPNSYIFHPENAIDCSSFIDDPSDRELDQIGAFLAGVKDVDDVRDVCNLWREWPNIHLPT 243
BLAST of mRNA_H-paniculata_contig3078.8337.1 vs. uniprot
Match: A0A7S1DE55_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DE55_CYCTE) HSP 1 Score: 212 bits (539), Expect = 1.070e-60 Identity = 105/191 (54.97%), Postives = 138/191 (72.25%), Query Frame = 1
Query: 721 EQEQPLLGPQLPKFAGRKQLILDLDETLVHSSFKPVAGADYIMDIKVDSTYYKVFVRKRPGVDEFLRRVARDYEVIIFTASLPQYANPLLDLLDPTRRITSRLFREHCTFHEGYFVKDLTRLRFQSLESTIIVDNSPMAYMFQPENAIDCMSWIDEQDDRELYVIADFLEAVVGVPDVRDLLEFWREGSHI 1293
EQ LL P G+K L+LDLDETLVHSSF+ V GAD+++ ++++ + V+V KRPGVDEFL +A+ YE++I+TASL +YA+PLLDLLDP R I +RLFRE C +HEG +VKD++ L + L +IIVDNSP +Y+F PENAIDC S+ID+ DREL I FL + V DVR+L FWRE H+
Sbjct: 206 EQTIRLLPDVHPVDHGKKCLVLDLDETLVHSSFRAVPGADFVIPVQIEDVVHFVYVAKRPGVDEFLVEMAKHYEIVIYTASLNKYADPLLDLLDPCRVIRARLFRESCVYHEGNYVKDMSLLN-RDLSQSIIVDNSPSSYLFHPENAIDCSSFIDDPQDRELDQIGAFLTGIKDVEDVRNLCSFWREWPHV 395
BLAST of mRNA_H-paniculata_contig3078.8337.1 vs. uniprot
Match: A0A7S1CGP4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CGP4_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.620e-60 Identity = 103/195 (52.82%), Postives = 137/195 (70.26%), Query Frame = 1
Query: 697 EASPYPAPEQEQPLLGPQLPKFAGRKQLILDLDETLVHSSFKPVAGADYIMDIKVDSTYYKVFVRKRPGVDEFLRRVARDYEVIIFTASLPQYANPLLDLLDPTRRITSRLFREHCTFHEGYFVKDLTRLRFQSLESTIIVDNSPMAYMFQPENAIDCMSWIDEQDDRELYVIADFLEAVVGVPDVRDLLEFWRE 1281
E PY P LL P L K G+K L+LDLDETLVHSSFKPV DYI+ ++++ T + V+V KRPG D FL +VA D+EV++FTASL +YA+PLLD LD + I +RLFREHC FH G +VKDL ++ + ++ II+DNSP +Y+F PENAI S+ID+ DRELY + FLE++ PDVR +L W++
Sbjct: 71 EEDPYAVPS----LLEPILEKDVGKKLLVLDLDETLVHSSFKPVPNPDYIIPVEIEGTVHHVYVVKRPGCDYFLEKVANDWEVVVFTASLSKYADPLLDQLDVHKCIRARLFREHCVFHNGNYVKDLNQMG-RDIKQIIIIDNSPASYLFHPENAIPSDSFIDDMSDRELYDMVPFLESIRSAPDVRTVLGRWKK 260
BLAST of mRNA_H-paniculata_contig3078.8337.1 vs. uniprot
Match: A0A0G4I5H6_9ALVE (FCP1 homology domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I5H6_9ALVE) HSP 1 Score: 207 bits (527), Expect = 6.050e-60 Identity = 103/184 (55.98%), Postives = 137/184 (74.46%), Query Frame = 1
Query: 715 APEQEQPLLGPQLPKFAGRKQLILDLDETLVHSSFKPVAGADYIMDIKVDSTYYKVFVRKRPGVDEFLRRVARDYEVIIFTASLPQYANPLLDLLDPTRRITSRLFREHCTFHEGYFVKDLTRLRFQSLESTIIVDNSPMAYMFQPENAIDCMSWIDEQDDRELYVIADFLEAVVGVPDVRDLL 1266
A E+ +P+LGPQ P+ G+K L+LDLDETLVHSSF+PV A +++ ++++ T + ++V KRPGVDEFL VA+ YE +IFTASL +YA+PLLDLLDP + + RLFREHCT+ G +VKDL++L + LE IIVDNSP+AY QP+NAI SW D+Q DRELY + LEA+ V DV +L
Sbjct: 92 AKEEPKPMLGPQFPRDQGKKTLVLDLDETLVHSSFRPVPNAAFVIPVEIEGTIHDIYVCKRPGVDEFLVSVAKWYECVIFTASLSKYADPLLDLLDPHKTQSWRLFREHCTYWNGNYVKDLSKLG-RKLEHIIIVDNSPLAYGLQPDNAIPIKSWFDDQTDRELYDLIPILEALSMVDDVPAVL 274
BLAST of mRNA_H-paniculata_contig3078.8337.1 vs. uniprot
Match: A0A1E7FAY3_9STRA (NIF-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAY3_9STRA) HSP 1 Score: 204 bits (519), Expect = 9.330e-60 Identity = 101/182 (55.49%), Postives = 133/182 (73.08%), Query Frame = 1
Query: 736 LLGPQLPKFAGRKQLILDLDETLVHSSFKPVAGADYIMDIKVDSTYYKVFVRKRPGVDEFLRRVARDYEVIIFTASLPQYANPLLDLLDPTRRITSRLFREHCTFHEGYFVKDLTRLRFQSLESTIIVDNSPMAYMFQPENAIDCMSWIDEQDDRELYVIADFLEAVVGVPDVRDLLEFWRE 1281
LLGP G+K L+LDLDETLVHSSF+ VAGAD+++ ++++ + V+V KRPGVDEFL +A+ YE++I+TASL +YA+PLLDLLDP + I RLFRE C F+EG +VKDL+ L + L STII+DNSP +Y+F PENAIDC S+ID+ DREL I FL + DVR + WR+
Sbjct: 47 LLGPIHRLDTGKKCLVLDLDETLVHSSFRAVAGADFVIPVQIEDVVHFVYVAKRPGVDEFLIEMAKHYEIVIYTASLNKYADPLLDLLDPQKTIRYRLFRESCAFYEGNYVKDLSVLD-RDLSSTIIIDNSPNSYLFHPENAIDCSSFIDDPRDRELDQIGSFLTGIKDAKDVRGICHQWRD 227
BLAST of mRNA_H-paniculata_contig3078.8337.1 vs. uniprot
Match: A0A7S2DI05_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DI05_9STRA) HSP 1 Score: 203 bits (516), Expect = 3.240e-59 Identity = 100/183 (54.64%), Postives = 132/183 (72.13%), Query Frame = 1
Query: 736 LLGPQLPKFAGRKQLILDLDETLVHSSFKPVAGADYIMDIKVDSTYYKVFVRKRPGVDEFLRRVARDYEVIIFTASLPQYANPLLDLLDPTRRITSRLFREHCTFHEGYFVKDLTRLRFQSLESTIIVDNSPMAYMFQPENAIDCMSWIDEQDDRELYVIADFLEAVVGVPDVRDLLEFWREG 1284
+L P P RK L+LDLDETL+HSSF+ V A+YI+ + +++ + ++V KRP VDEFL++VA +EVII+TASL +YA+PLLD LD + I RLFRE CTFH+G +VK+L+ L + L TIIVDNSP++YMF P NAI C +W DE +DREL I DFL + VPDVR L+ WR+G
Sbjct: 50 VLPPATPANKARKCLVLDLDETLLHSSFRQVGYANYIIPVNIENKVHNIYVLKRPCVDEFLKKVAEHFEVIIYTASLSKYADPLLDQLDTEKVIQHRLFRESCTFHDGMYVKNLSLLD-RDLSQTIIVDNSPVSYMFHPRNAIGCYTWTDEMEDRELEDIGDFLVNIKDVPDVRSHLQHWRKG 231
BLAST of mRNA_H-paniculata_contig3078.8337.1 vs. uniprot
Match: A0A7S1YHT6_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YHT6_9STRA) HSP 1 Score: 208 bits (529), Expect = 7.990e-59 Identity = 107/202 (52.97%), Postives = 143/202 (70.79%), Query Frame = 1
Query: 700 ASPYPAPEQEQPLLGPQLPKFAGRKQLILDLDETLVHSSFKPVAGADYIMDIKVDSTYYKVFVRKRPGVDEFLRRVARDYEVIIFTASLPQYANPLLDLLDPTRRITSRLFREHCTFHEGYFVKDLTRLRFQSLESTIIVDNSPMAYMFQPENAIDCMSWIDEQDDRELYVIADFLEAVVGVPDVRDLLEFWREGSHILQPA 1305
A P P E LL P P G+K L+LDLDETLVHSSF+ V GAD+++ ++++ + V+V KRPGVDEFL +A+ YE++++TASL +YA+PLLDLLDP + I SRLFRE C ++EG +VKDL+ L + L+ +IIVDNSP +Y+F PENAIDC S+ID+ +DREL I FL + V DVR L WRE ++ PA
Sbjct: 244 AEPKPD-ENTVKLLPPIHPDDKGKKCLVLDLDETLVHSSFRSVPGADFVIPVQIEDVVHFVYVMKRPGVDEFLTEMAKHYEIVVYTASLNKYADPLLDLLDPNKVIRSRLFRESCVYYEGNYVKDLSLLD-RDLKESIIVDNSPNSYIFHPENAIDCSSFIDDPNDRELDQIGAFLAGISKVKDVRHLSNKWREWPNVELPA 443 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3078.8337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3078.8337.1 >prot_H-paniculata_contig3078.8337.1 ID=prot_H-paniculata_contig3078.8337.1|Name=mRNA_H-paniculata_contig3078.8337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=437bp RRASFVVYPEAEDDGKPKVFARQSFVVSGEEEEMAETILKARMLAGQRRRback to top mRNA from alignment at H-paniculata_contig3078:2162..9136- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3078.8337.1 ID=mRNA_H-paniculata_contig3078.8337.1|Name=mRNA_H-paniculata_contig3078.8337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6975bp|location=Sequence derived from alignment at H-paniculata_contig3078:2162..9136- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3078:2162..9136- >mRNA_H-paniculata_contig3078.8337.1 ID=mRNA_H-paniculata_contig3078.8337.1|Name=mRNA_H-paniculata_contig3078.8337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2622bp|location=Sequence derived from alignment at H-paniculata_contig3078:2162..9136- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |