prot_H-paniculata_contig3071.8325.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig3071.8325.1
Unique Name	prot_H-paniculata_contig3071.8325.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	103

Homology

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BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: A0A836CGC2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC2_9STRA)

HSP 1 Score: 157 bits (396), Expect = 3.600e-47
Identity = 73/101 (72.28%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 MHKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFSDR 101
            MH+VTIE  GK+H LEV  + S+LEAALD GI+LPHDCKLGVCLTCPS +VSGEVDQ   TLD +VVEQG+ALTCCS+P+SD+VIR+++EDELVGAQF  R
Sbjct:   54 MHQVTIEVAGKSHTLEVDEKTSVLEAALDAGIELPHDCKLGVCLTCPSKIVSGEVDQDGTTLDDSVVEQGYALTCCSFPRSDLVIRAIDEDELVGAQFEGR 154

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BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: A0A6H5KV05_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV05_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 5.510e-46
Identity = 75/102 (73.53%), Postives = 85/102 (83.33%), Query Frame = 0

Query:    1 MHKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFSDRT 102
            MH+VTIEH G +  LEV    +ILEAALD  IDLPHDCKLGVCLTCPS VVSGEVDQS+GTL+ +V   G+ALTCC+Y +SDV IRSVEEDELVGAQFSDR+
Sbjct:   63 MHQVTIEHEGTSTVLEVDENTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDRS 164

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BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: A0A7S2V4F7_9STRA (Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.580e-46
Identity = 74/100 (74.00%), Postives = 84/100 (84.00%), Query Frame = 0

Query:    2 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFSDR 101
            H+VTI+H GK   LEV    +ILEAALD GIDLPHDC+LGVCLTCPS +VSGEVDQ  GTLD +VVEQGFALTC SYP+SD V+RSVEEDE+V AQF+DR
Sbjct:   51 HQVTIQHEGKDTVLEVDESTTILEAALDAGIDLPHDCQLGVCLTCPSRIVSGEVDQGMGTLDDSVVEQGFALTCISYPRSDCVVRSVEEDEMVNAQFADR 150

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BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: A0A7S3UW21_HETAK (Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW21_HETAK)

HSP 1 Score: 144 bits (362), Expect = 3.590e-42
Identity = 70/101 (69.31%), Postives = 81/101 (80.20%), Query Frame = 0

Query:    2 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFSDRT 102
            H+VTIEH G T  LEV    SIL+AALD GIDLPHDCKLGVCLTCPS VVSGEVDQS+GTL+ +V  QG+ALTC ++P+SD  I S+ EDELV AQFS R+
Sbjct:   42 HQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGRS 142

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BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: A0A482SDV3_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDV3_9ARCH)

HSP 1 Score: 140 bits (353), Expect = 8.650e-41
Identity = 68/98 (69.39%), Postives = 80/98 (81.63%), Query Frame = 0

Query:    2 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFS 99
            +KVTI+H GK   L+V    SIL AALD GIDLPHDCKLGVCLTCPS +VSG+VDQS+GTL  +V  +G+ALTC S+P SDVV+RS+EEDELV AQFS
Sbjct:   43 YKVTIQHEGKDTILDVQDDCSILNAALDAGIDLPHDCKLGVCLTCPSKIVSGKVDQSDGTLAKSVQAKGYALTCVSFPCSDVVVRSIEEDELVSAQFS 140

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BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: W7U5Y2_9STRA (Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5Y2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.900e-39
Identity = 64/99 (64.65%), Postives = 79/99 (79.80%), Query Frame = 0

Query:    2 HKVTIEH-GGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFS 99
            HKVTIE   GKTHE+ V    S+LEAALDEGI+LPHDC+LG CL C + ++SG VDQ+  TLD +V+EQG+ALTCCSYP+SDV IRS+ EDEL+  QF+
Sbjct:   41 HKVTIETLDGKTHEINVESYKSVLEAALDEGIELPHDCQLGTCLVCAAKLISGTVDQTGSTLDDSVMEQGYALTCCSYPQSDVTIRSIPEDELIDEQFA 139

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BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: K4AFH5_SETIT (Ferredoxin n=4 Tax=PACMAD clade TaxID=147370 RepID=K4AFH5_SETIT)

HSP 1 Score: 129 bits (325), Expect = 6.430e-36
Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = 0

Query:    2 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFS 99
            +KVTIEHGG++  +EV G  +IL  ALDEG+D+PHDCKLGVC+TCP+ +VSGEVDQS+G L   VV QG+AL C +YP+SD  IR + EDEL+  Q +
Sbjct:   91 YKVTIEHGGESRVVEVEGDETILSRALDEGLDVPHDCKLGVCMTCPARLVSGEVDQSDGMLSDDVVAQGYALLCAAYPRSDCTIRVIPEDELLQVQLA 188

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BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: Q850T5_ORYSJ (Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_ORYSJ)

HSP 1 Score: 127 bits (319), Expect = 1.430e-35
Identity = 59/98 (60.20%), Postives = 75/98 (76.53%), Query Frame = 0

Query:    2 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFS 99
            +KVTIEHGG++  +EV    +IL  ALDEGID+PHDCKLGVC+TCP+ +V+GEVDQS+G L   VV QG+AL C SYP+SD  IR + EDEL+  Q +
Sbjct:   46 YKVTIEHGGESRVVEVEEGETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLKVQLA 143

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BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: UPI001ADA50ED (ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADA50ED)

HSP 1 Score: 126 bits (317), Expect = 2.490e-35
Identity = 58/98 (59.18%), Postives = 75/98 (76.53%), Query Frame = 0

Query:    2 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFS 99
            ++VTIEHGG++  +EV    +IL  ALDEGID+PHDCKLGVC+TCP+ +V+GEVDQS+G L   VV QG+AL C SYP+SD  IR + EDEL+  Q +
Sbjct:   41 YRVTIEHGGESRVVEVGEDETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 138

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BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Match: A0A2T7C2X2_9POAL (Ferredoxin n=6 Tax=Paniceae TaxID=147428 RepID=A0A2T7C2X2_9POAL)

HSP 1 Score: 126 bits (317), Expect = 2.640e-35
Identity = 58/98 (59.18%), Postives = 75/98 (76.53%), Query Frame = 0

Query:    2 HKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMVVSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFS 99
            +KVTIEHGG++  +EV    +IL  ALDEG+D+PHDCKLGVC+TCP+ +VSGEVDQS+G L   VV QG+AL C +YP+SD  IR + EDEL+  Q +
Sbjct:   43 YKVTIEHGGESRVVEVEWDETILSRALDEGLDVPHDCKLGVCMTCPARLVSGEVDQSDGMLSDDVVAQGYALLCAAYPRSDCTIRVIPEDELLQVQLA 140

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig3071.8325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CGC2_9STRA	3.600e-47	72.28	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A6H5KV05_9PHAE	5.510e-46	73.53	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S2V4F7_9STRA	5.580e-46	74.00	Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617...	[more]
A0A7S3UW21_HETAK	3.590e-42	69.31	Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829...	[more]
A0A482SDV3_9ARCH	8.650e-41	69.39	2Fe-2S iron-sulfur cluster binding domain-containi...	[more]
W7U5Y2_9STRA	1.900e-39	64.65	Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 Re...	[more]
K4AFH5_SETIT	6.430e-36	60.20	Ferredoxin n=4 Tax=PACMAD clade TaxID=147370 RepID...	[more]
Q850T5_ORYSJ	1.430e-35	60.20	Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_...	[more]
UPI001ADA50ED	2.490e-35	59.18	ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachy...	[more]
A0A2T7C2X2_9POAL	2.640e-35	59.18	Ferredoxin n=6 Tax=Paniceae TaxID=147428 RepID=A0A...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 8..80 e-value: 7.4E-14 score: 51.5
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 2..91 score: 11.861
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 1..101 e-value: 6.9E-25 score: 88.7
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 2..98
None	No IPR available	PANTHER	PTHR43112:SF9	FERREDOXIN C 1, CHLOROPLASTIC	coord: 2..98
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 1..93

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig3071	contig	H-paniculata_contig3071:8296..13677 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig3071.8325.1	mRNA_H-paniculata_contig3071.8325.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig3071 3564..14113 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig3071.8325.1 ID=prot_H-paniculata_contig3071.8325.1|Name=mRNA_H-paniculata_contig3071.8325.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
MHKVTIEHGGKTHELEVAGRLSILEAALDEGIDLPHDCKLGVCLTCPSMV
VSGEVDQSEGTLDAAVVEQGFALTCCSYPKSDVVIRSVEEDELVGAQFSD
RT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001041	2Fe-2S_ferredoxin-type
IPR012675	Beta-grasp_dom_sf
IPR036010	2Fe-2S_ferredoxin-like_sf