mRNA_H-paniculata_contig307.8320.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig307.8320.1 vs. uniprot
Match: A0A6H5L1U8_9PHAE (GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1U8_9PHAE) HSP 1 Score: 600 bits (1548), Expect = 3.070e-207 Identity = 291/434 (67.05%), Postives = 346/434 (79.72%), Query Frame = 3
Query: 273 NSYLSLSLSPHYSHTTSATPQGDGTAVQAMV---------SLPMADLFLGTPPKWRDPKRDFEDEYLEVLEAVPELRSTRRARIAFFIMAHGPTDVEMLKKSLPWLYSPNNYILVHMDSKTADEDREEVRKLLDGLKNAKMLDPPMSVSWGGFSITLAALYGVSTMVEWGQDWDYFINLSASDFPLMTAVEMEAAMGTFVDGRVNFVTGSAMMEKNRAELYVDDQGLYRVNETRKASQPFLQRNAH---LRVERPLPNLFTLFKGEFWVALHRDFCEYLHESPDNVARSLQAYFAKFRISDESYFQTTLCHPHTPEAFPVVNDNLRHVNWPQFDPETEWVLHPDPVESKHVAKLMNSGALFARKFEHGTSDEAWSDIETLLAAKGDAIAQRMARVMERAAAARTVQGREALCTVPEGYDLAYILRHQPVKKQHE 1538
+S S SLS SH +AT +G P++ L G PP WRDP+RDF+ EY EV+ AVP L TR AR AF IMAHGP DVE+L++++PWLYSP N+ L+HMD K++D+DR +VR+LL GL NA++L+P SVSWGG+SITL AL+G+ST+VEW +DWDYFINLSA+DFPL+++ EM AMG+FV+ R+NFVTGSAMME+NRAELYVDDQGLYRVNETR+A+QPFLQR +RVERPLPNLFTLFKGEFWVALHRDFCEY+HESPDNVARSLQAYFAKFRISDES+FQTTLCHP P AFP+ NDNLR VNWP FDPETEWVLHPDPV+SKHV KLM SGALFARKFE GTSD AWS+IE LL+ KG + +R+ RV+ER AR+V+GRE CTVPEGYDL YILRHQ +K++ +
Sbjct: 47 SSSSSFSLSTPRSHADTATAAINGGRXXXXXXXXXXXGEGGFPLSKLLSGYPPYWRDPRRDFQAEYDEVIAAVPGLSGTRPARFAFLIMAHGPADVELLRRNVPWLYSPLNFFLIHMDRKSSDKDRADVRELLHGLDNARILEPAQSVSWGGYSITLTALFGLSTLVEWSRDWDYFINLSATDFPLLSSAEMSVAMGSFVESRMNFVTGSAMMEQNRAELYVDDQGLYRVNETRRAAQPFLQRRQSGPPVRVERPLPNLFTLFKGEFWVALHRDFCEYVHESPDNVARSLQAYFAKFRISDESFFQTTLCHPAAPSAFPIHNDNLRLVNWPYFDPETEWVLHPDPVQSKHVTKLMKSGALFARKFELGTSDRAWSEIEGLLSQKGKHVGERILRVLERGKPARSVRGREEFCTVPEGYDLDYILRHQKIKRERK 480
BLAST of mRNA_H-paniculata_contig307.8320.1 vs. uniprot
Match: A0A6H5L6Q9_9PHAE (Protein xylosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6Q9_9PHAE) HSP 1 Score: 324 bits (830), Expect = 3.010e-98 Identity = 172/381 (45.14%), Postives = 231/381 (60.63%), Query Frame = 3
Query: 483 RRARIAFFIMAHGPTDVEMLKKSLPWLYSPNNYILVHMDSKTADEDREEVRKLLDGLKNAKMLDPPMSVSWGGFSITLAALYGVSTMVEWGQDWDYFINLSASDFPLMTAVEMEAAMGTFVDGRVNFVTGSAMMEKNRAELYVDDQGLYRVNETRKASQPFLQRNAHLRVERPLPNLFTLFKGEFWVALHRDFCEYLHESPDNVARSLQAYFAKFRISDESYFQTTLCHPHTP-------EAFPVV-----------NDNLRHVNWPQFDPETEWVLHPDPVE---SKHVAKLMNSGALFARKFEHGTSDEAWSDIETLLAAKGDAIAQRMARVMERAAAARTVQGREALCTVPEGYDLAYILRHQPVKK----QHEEDGG 1550
+RARI + IM+ G ++ K+ L +Y PNN+ LVH+D K R + ++ N +ML+P + VSWGG++ITL A++G+ TMV+W +WD+FINLSASDFPL+ E+ +G + D +NFV+G + E+NRAE+ +DDQGLYR ++ KA +P A L P ++FT++KGEFWV LHR FC+YL SPDNVARSLQAYF+KFRISDESYFQT LCHP P E P+V DNLR V+WP E +VLHPDP+ S +V M+SGALFARKF+ S EA++ +E L+ R+AR R A V GR+ C +P+GY + +L P K Q DG
Sbjct: 172 KRARIGYLIMSSGTEELHKTKRLLKAIYDPNNFYLVHLDRKDKHSIRRDFENFIEEWDNVRMLEPALDVSWGGYTITLTAIFGICTMVQWNDEWDFFINLSASDFPLLPQSELTTVLGKYADVGMNFVSGEPLNERNRAEVLIDDQGLYREKQSSKAGRPLKVGKARLP---PSKSMFTVYKGEFWVILHRSFCKYLEASPDNVARSLQAYFSKFRISDESYFQTVLCHPLAPSFLVQPAEKVPIVCLATKRLSCSFTDNLRFVSWPDVI-EGHYVLHPDPITGGASGNVNVAMDSGALFARKFDTKVSQEAYTVLEKSLSEPNPG---RLARAANRLNPAAAVTGRKKFCFIPDGYSIQEVLSRPPKKAMGMHQDRSDGS 545
BLAST of mRNA_H-paniculata_contig307.8320.1 vs. uniprot
Match: D8LDZ1_ECTSI (Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ1_ECTSI) HSP 1 Score: 253 bits (647), Expect = 2.360e-72 Identity = 155/378 (41.01%), Postives = 211/378 (55.82%), Query Frame = 3
Query: 474 RSTRRARIAFFIMAHGPTDVEMLKKSLPWLYSPNNYILVHMDSKTADEDREEVRKLL-------DGLK-NAKMLDPPMSVSWGGFSITLAALYGVSTMVEWGQDWDYFINLSASDFPLMTAVEMEAAMGTFVDGRVNFVTGSAMME-KNRAELYVDDQGLYRVNETRKASQPFLQRNAHLRVERPLPNLFTLFKGEFWVALHRDFCEYLHESPDNVARSLQAYFAKFRISDESYFQTTLCHPHTPEAFPVVNDNLRHVNWPQ---------FDPETEWVLHPDPVESKHVAKLMNSGALFARKFEHGTSDEAWSDIETLLAAKGDAIAQRMARVMER-AAAARTVQGREALCTVPEGYDLAYILRHQPVKKQHEEDGG 1550
R RRAR+AF IM+ G D+ L LP +Y P+N LVH+D+K E E++R+++ DG N ++L+P VSWGGFSITLA LYG++ + W + WDYFINLS SDFP++T EM +G D V+F+ G M + R + Y +DQGL R R + R++R P F L+KGEFW A HR FCEY SPDNVAR+L AYF +RISDESYFQT CHP + FP+ DN R +W + D ++HP+P+ V K+M+SGALFARKF++ S + ++ L + D A R+ R R A GR+ C GY+ R + +K++E GG
Sbjct: 144 RGERRARLAFLIMSSGD-DIAKLSVLLPEIYHPDNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPPNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGELMTGFEKRWQGYTEDQGLQR----RADHHTSVAMQTLGRIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTLACHPEG-KVFPIHGDNFRFTSWNEHHRDSHGRKIDANGHILIHPEPLAIASVDKIMSSGALFARKFDYAKSYRVYQAMQDDLRNR-DRSAARLDRARARFGLRASDKGGRDDFCRG--GYNS---FRRRTEEKRNEGGGG 509
BLAST of mRNA_H-paniculata_contig307.8320.1 vs. uniprot
Match: A0A6H5KBR7_9PHAE (GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR7_9PHAE) HSP 1 Score: 246 bits (628), Expect = 2.900e-70 Identity = 152/380 (40.00%), Postives = 208/380 (54.74%), Query Frame = 3
Query: 474 RSTRRARIAFFIMAHGPTDVEMLKKSLPWLYSPNNYILVHMDSKTADEDREEVRKLL-------DGL-KNAKMLDPPMSVSWGGFSITLAALYGVSTMVEWGQDWDYFINLSASDFPLMTAVEMEAAMGTFVDGRVNFVTGSAMME-KNRAELYVDDQGLYRVNETRKASQPFLQRNAHLRVERPLPNLFTLFKGEFWVALHRDFCEYLHESPDNVARSLQAYFAKFRISDESYFQTTLCHPHTPEAFPVVNDNLRHVNWPQF---------DPETEWVLHPDPVESKHVAKLM--NSGALFARKFEHGTSDEAWSDIETLLAAKGDAIAQRMARVMER-AAAARTVQGREALCTVPEGYDLAYILRHQPVKKQHEEDGG 1550
R RRAR+AF IM+ G D+ L LP +Y P+N LVH+D+K E E++R+++ DG N K+L+P VSWGGFSITLA LYG++ + W + WDYFINLS SDFP++T EM +G D V+F+ G M + R + Y +DQGL+R R + R++R P F L+KGEFW A HR FCEY SPDNVAR+L AYF +RISDESYFQT CHP + FP+ DN R +W + D ++HP+P+ + K+ +SGALFARKF++ S + + ++ L + D A R+ R R A GR+ C Y + ++Q E GG
Sbjct: 84 RGERRARLAFLIMSSGD-DIAKLSVLLPEIYHPDNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGEPMTGFEKRWQGYTEDQGLHR----RADHHTSVAMQTLGRIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTLACHPEG-KVFPIHGDNFRFTSWNEHHRDSHGRKVDANGHILIHPEPLAIASIDKIKASSSGALFARKFDYVKSYQVYQAMQDDLRNR-DRSAARLERARARFGLRASDKGGRDDFC------GGGYKAFRRRTEEQRNEGGG 450
BLAST of mRNA_H-paniculata_contig307.8320.1 vs. uniprot
Match: A0A835YZY2_9STRA (Core-2/I-branching enzyme-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY2_9STRA) HSP 1 Score: 221 bits (564), Expect = 4.510e-62 Identity = 133/346 (38.44%), Postives = 193/346 (55.78%), Query Frame = 3
Query: 471 LRSTRRARIAFFIMAHGPTDVEMLKKSLPWLYSPNNYILVHMDSKTADEDREEVRKLLDGL-----KNAKMLDPPMSVSWGGFSITLAALYGVSTMVEWGQDWDYFINLSASDFPLMTAVEMEAAMGTFVDGR-VNFVTGSA----MMEKNRAELYVDDQGLYRVNETRKASQPFLQR--NAHLRVERPLPNLFTLFKGEFWVALHRDFCEYLHESPDNVARSLQAYFAKFRISDESYFQTTLCHPHTPEAFPVVNDNLRHVNWPQFDPETEWVLHPDPVESKHVAKLMNSGALFARKFEHGTSDEAWSDIETLLAAKGDAIAQRMARVMERAAAARTVQGREALC 1472
LRS A+I F I G D L L L+ +N L+H+D+K D +R ++ + KN K++D P+ VSWG FS+ L AL+G+S+ + W WD++INLS +D PL+TA EM +G R V+F+ + + +R Y+DD+GLYR + +Q V RP P+LF ++KGEFWV LHR EY+H SPDNVARS+ Y A ISDE +FQT CHP P +F ++ND+LR + WP P++ HP ++ + + + SGALFARKF+H + ++ ++ L ++ +RMA M R A +GRE LC
Sbjct: 36 LRSATPAKILFSITISGSRDALALSTLLRALWHQDNLYLLHVDAKALASDMAAIRNVIKQVAGADPKNIKLVDNPVQVSWGRFSMLLTALHGLSSAIGWSSQWDFWINLSPADMPLLTADEMRLVLGALSRDRPVSFMGCTRPDWEQVRPDRRHTYMDDEGLYRSLPRPRGRLSVIQHAPKPMRGVARPPPDLFDVYKGEFWVVLHRSLAEYIHHSPDNVARSVYLYLAATYISDELFFQTVACHPKLPASFHIINDSLRFIRWP---PKSRG--HPATIDDVLLEEALASGALFARKFDHRRAPDSALALKAALNDPQLSL-RRMALTMMRTHA----KGREDLC 371
BLAST of mRNA_H-paniculata_contig307.8320.1 vs. uniprot
Match: A0A6H5KJT8_9PHAE (Protein xylosyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT8_9PHAE) HSP 1 Score: 203 bits (517), Expect = 2.300e-54 Identity = 129/339 (38.05%), Postives = 183/339 (53.98%), Query Frame = 3
Query: 483 RRARIAFFIMAHGPTDVEMLKKSLPWLYSPNNYILVHMDSKTADEDREEVR----KLLD----GLKNAKMLDPPMSVSWGGFSITLAALYGVSTMVEWGQDWDYFINLSASDFPLMTAVEMEAAMGTFVDGRVNFVTGSAMMEK-------NRAELYVDDQGLYRVNETRKASQPFLQRNAHLRV-ERPLPNLFTLFKGEFWVALHRDFCEYLHESPDNVARSLQAYFAKFRISDESYFQTTLCHPHTP-EAFPVVNDNLRHVNWPQFDPETEWVLHPDP--VESKHVAKLMNSGALFARKF----EHGTSDEAWSDIETLLAAKGDAIAQRMARVMER 1430
++AR+ F+IM ++ L L LY +++ LVH+D K + R+ V ++LD G +N + +DP M V+WGGF++TL A+YG++ + W WDYFINLSASD PL+ A E+ +G G +F+TG +R E++ +D+ + R + R+ P+ +A + RP+PN+FT+ KGEFWV LHR EY+H+S DN AR L YF+ +SDE +FQT C+P P + V NDNLR VNW W P V NSGALF RKF E G W +E+ LAA + A R+ RV R
Sbjct: 85 QKARVVFYIMVANLQELPGLDALLRTLYHVDHFFLVHLDVKASALARQGVESGIERMLDERGNGERNVRFVDPAMPVTWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMR-DTGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSRDNQARMLLTYFSGMIVSDEEFFQTVACNPFFPHDTLRVHNDNLRFVNW--------WGDQASPAIVPPFRAVAAANSGALFGRKFSSSTEEGRDGVRW--VESYLAASSRSKA-RVDRVKRR 411
BLAST of mRNA_H-paniculata_contig307.8320.1 vs. uniprot
Match: D8LCA7_ECTSI (Protein xylosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA7_ECTSI) HSP 1 Score: 192 bits (489), Expect = 4.350e-52 Identity = 109/282 (38.65%), Postives = 157/282 (55.67%), Query Frame = 3
Query: 561 LYSPNNYILVHMDSKTADEDRE----EVRKLLD----GLKNAKMLDPPMSVSWGGFSITLAALYGVSTMVEWGQDWDYFINLSASDFPLMTAVEMEAAMGTFVDGRVNFVTGSAMMEK-------NRAELYVDDQGLYRVNETRKASQPFLQRNAHLRV-ERPLPNLFTLFKGEFWVALHRDFCEYLHESPDNVARSLQAYFAKFRISDESYFQTTLCHPHTP-EAFPVVNDNLRHVNWPQFDPETEWVLHPDP--VESKHVAKLMNSGALFARKFEHGTSD 1349
LY +++ LVH+D K + + R+ + ++LD G +N + + P M ++WGGF++TL A+YG++ + W WDYFINLSASD PL+ E+ +G G +F+TG +R E++ +D+ + R N R+ P+ +AH + RP+PN+FT+ KGEFWV LHR EY+H+SPDN AR L Y + +SDE +FQT C+P P + V NDNLR VNW W P V + NSGALF RKF T +
Sbjct: 18 LYHVDHFFLVHLDVKASAQARQGVESRIERVLDERGNGERNVRFVSPAMPITWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLKD-EIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMR-NTGREKRWPWAILDAHKEMLRRPMPNIFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYSSGMMVSDEEFFQTVACNPFFPHDTLRVHNDNLRFVNW--------WGDQASPAIVPTFRAVAAANSGALFGRKFSSSTEE 289
BLAST of mRNA_H-paniculata_contig307.8320.1 vs. uniprot
Match: A0A6D2KPW0_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KPW0_9BRAS) HSP 1 Score: 142 bits (357), Expect = 5.210e-33 Identity = 96/288 (33.33%), Postives = 155/288 (53.82%), Query Frame = 3
Query: 504 FIMAHGPTDVEMLKKSLPWLYSPNNYILVHMDSKTADEDREEVRK------LLDGLKNAKMLDPPMSVSWGGFSITLAALYGVSTMVEWGQDWDYFINLSASDFPLMTAVEMEAAMGTF--VDGRVNFVTGSAMM---EKNRAELYVDDQGLYRVNETRKASQPFLQRNAHLRVERPLPNLFTLFKGEFWVALHRDFCEYLHESPDNVARSLQAYFAKFRISDESYFQTTLCHPHTPE-AFPVVNDNLRHVNWPQFDPETEWVLHPDPVESKHVAKLMNSGALFARKF 1331
++++ D+E L + L +Y P N +VH+D + E+R E+ K + + N M+ V++ G ++ L+G + +++ +DWD+FINLSASD+PL+T ++ + TF +D +NF+ ++ + E +RA+ + D GLY N+ S FL + R +P F LF G FW+ L R F EY DN+ R+L Y+ F S E YF T +C+ PE + VVN +LR+++W DP + HP + K++ SGA+FARKF
Sbjct: 59 YLVSGSSGDLESLWRVLRAVYHPRNQYVVHLDLASPSEERLELAKRVKEDPVYSHVGNVFMITKANLVTYRGPTMVANTLHGCAILLKLSKDWDWFINLSASDYPLVTQDDL---IHTFSRLDRNLNFIEHTSNLGWKEDHRAKPLIIDPGLYSTNK----SDVFL-----VTPSRTVPTAFKLFTGSFWMVLSRPFVEYCIWGWDNLPRTLLMYYTNFVSSSEGYFHTVICN--APEYSTKVVNHDLRYISWD--DPPQQ---HPLTLGINDTEKMIASGAVFARKF 327
BLAST of mRNA_H-paniculata_contig307.8320.1 vs. uniprot
Match: A0A251T1S4_HELAN (Putative core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251T1S4_HELAN) HSP 1 Score: 142 bits (357), Expect = 8.510e-33 Identity = 97/293 (33.11%), Postives = 158/293 (53.92%), Query Frame = 3
Query: 504 FIMAHGPTDVEMLKKSLPWLYSPNNYILVHMDSKTADEDREEVRKLLDG------LKNAKMLDPPMSVSWGGFSITLAALYGVSTMVEWGQDWDYFINLSASDFPLMTAVEMEAAMGTF--VDGRVNFVTGSAMM---EKNRAELYVDDQGLYRVNETRKASQPFLQRNAHLRVERPLPNLFTLFKGEFWVALHRDFCEYLHESPDNVARSLQAYFAKFRISDESYFQTTLCHPHTPEAFP-VVNDNLRHVNWPQFDPETEWVLHPDPVESKHVAKLMNSGALFARKFEHGTS 1346
++++ D+ L ++L LY P NY +VH+D ++ E+R E+ ++ + N M+ V++ G ++ L+ + +++ +DWD+FINLSASD+PL+T ++ + TF ++ NFV ++ + E RA + D GLY E +K+ ++Q N RPLP F LF G W+ L R F EY DN+ R+L Y+ F S E YFQT +C+ PE P VVN ++ ++W +P + HP ++ AK++ SGA FARKF+ T+
Sbjct: 87 YLISGSKGDLNKLWRTLRALYHPWNYYVVHLDLESEPEERMELASRVEKDPMFAEVGNVYMITKANMVTYRGPTMVSNTLHACAILLKKYKDWDWFINLSASDYPLVTQDDL---LSTFRNLNRDWNFVEHTSQLGWKEDQRAMPLMIDPGLY---ENKKSDIFWVQPN------RPLPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRTLLMYYTNFVSSPEGYFQTVICN--VPEFIPTVVNHDMHFISWD--NPPKQ---HPHVLDINDTAKMIKSGAAFARKFDQDTA 360
BLAST of mRNA_H-paniculata_contig307.8320.1 vs. uniprot
Match: A0A0D3DGE5_BRAOL (Uncharacterized protein n=7 Tax=Brassiceae TaxID=981071 RepID=A0A0D3DGE5_BRAOL) HSP 1 Score: 141 bits (356), Expect = 1.080e-32 Identity = 96/307 (31.27%), Postives = 160/307 (52.12%), Query Frame = 3
Query: 504 FIMAHGPTDVEMLKKSLPWLYSPNNYILVHMDSKTADEDREEVRK------LLDGLKNAKMLDPPMSVSWGGFSITLAALYGVSTMVEWGQDWDYFINLSASDFPLMTAVEMEAAMGTFVDGRVNFVTGSAMM---EKNRAELYVDDQGLYRVNETRKASQPFLQRNAHLRVERPLPNLFTLFKGEFWVALHRDFCEYLHESPDNVARSLQAYFAKFRISDESYFQTTLCHPHTPE-AFPVVNDNLRHVNWPQFDPETEWVLHPDPVESKHVAKLMNSGALFARKFEHGTSDEAWSDIETLLAAKGD 1394
++++ D+E L + L LY P N +VH+D ++ E+R E+ K + + + N M+ V++ G ++ L+ + +++ +DWD+FINLSASD+PL+T ++ T +D +NF+ ++ + + RA+ + D GLY T+KA ++ R +P F LF G W+ L R F EY DN+ R+L Y+ F + E YFQT +C+ TPE + VVN +L +++W + + HP + +++ SGA+FARKF+H DIE L GD
Sbjct: 82 YLVSGSKGDLESLWRVLRALYHPRNQYVVHLDLESPAEERIELAKRVREDPVFNDVGNVHMITKANLVTYRGPTMVANTLHACAILLKKSKDWDWFINLSASDYPLVTQDDLIHTF-TGLDRNLNFIDYTSKLGWKAEKRAKPLIIDPGLY---STKKADVFWVT------PRRTMPTAFKLFTGSAWMILSRSFVEYCIWGWDNLPRTLLMYYTNFLSTPEGYFQTVICN--TPEYSSTVVNHDLHYISWDRPPKQ-----HPRTLNISDTERMIASGAVFARKFKHNDLALDKIDIELLGRGSGD 371 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig307.8320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig307.8320.1 >prot_H-paniculata_contig307.8320.1 ID=prot_H-paniculata_contig307.8320.1|Name=mRNA_H-paniculata_contig307.8320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=472bp MVWRRRQAHGPSSRQHPSRRRTKTFLLMAAAGTVILYMVYFRLSLNSYLSback to top mRNA from alignment at H-paniculata_contig307:34887..41565- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig307.8320.1 ID=mRNA_H-paniculata_contig307.8320.1|Name=mRNA_H-paniculata_contig307.8320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6679bp|location=Sequence derived from alignment at H-paniculata_contig307:34887..41565- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig307:34887..41565- >mRNA_H-paniculata_contig307.8320.1 ID=mRNA_H-paniculata_contig307.8320.1|Name=mRNA_H-paniculata_contig307.8320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2832bp|location=Sequence derived from alignment at H-paniculata_contig307:34887..41565- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |