mRNA_H-paniculata_contig113.831.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig113.831.1 vs. uniprot
Match: D7FSQ9_ECTSI (DOT1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ9_ECTSI) HSP 1 Score: 384 bits (986), Expect = 9.740e-118 Identity = 207/341 (60.70%), Postives = 244/341 (71.55%), Query Frame = 1
Query: 955 RTPAKSRTPSGGLVAWRLGAAAEDDDDGEIQNLTPNKDRSRR-----PNRALEMTPTKKTKAR--QCFGSPAKDRVVVPPAVSRVYGLVQKATGSVGGNGCCGAIYGELTVGSMQKVVNCLKEETGFDENSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVANHRWLLRDQGGPDGVELKKNNLFFAHGDIMSAKTFDPFTHVYMFDVGFPPDTLKAIAKMFNASEARHLISYQNPKKVMQECGFDVEKVLQLPLHLTVSHEGHMMYLYRRRGVPAGLKIKSIEKVDPFFERGVRLCRESTEGGLDDDLAAYVEACFAEHTSGGVRTRTRRR 1956
+TPAK TP V + G ++ TP+K + P R L MTPTKK + + G+P K RV VP VSRVY +V KATG++GGNG GAIYGELTVG MQKVVN LKE TGFDE SSFIDVG+GLGKPNFHVAQDPG EISYGLELE VRW+LS+ANHR +L+D+G +GV + K+NLFFA GDI+ +TFDPFTHVYMFD+GFPP TL IAK FN S+ARHL+SYQ PKKV+ GFDV+ VLQ PL LT S EGH MYL+RR+ V GLKI+ I++VDPFF GV+LCR EGG +L A+VE F +TSGGVRTR RR
Sbjct: 115 KTPAKRGTPKDVKVMRQGGDGEXXXXXXGGESATPSKKKKTEAALEGPVRTLSMTPTKKKRGAFGRKDGTPMKARVDVPEEVSRVYAIVAKATGNIGGNGSDGAIYGELTVGGMQKVVNVLKEHTGFDEMSSFIDVGAGLGKPNFHVAQDPGVEISYGLELEVVRWELSIANHRMVLQDEGD-NGVHVAKHNLFFARGDILGCETFDPFTHVYMFDIGFPPATLHEIAKKFNNSKARHLVSYQVPKKVIDVYGFDVDLVLQQPLSLTGSGEGHTMYLFRRKNVEPGLKIERIDEVDPFFAEGVKLCRNRGEGG-GSELTAHVEGAFERNTSGGVRTRRSRR 453
BLAST of mRNA_H-paniculata_contig113.831.1 vs. uniprot
Match: A0A7S4QC13_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QC13_9STRA) HSP 1 Score: 238 bits (608), Expect = 6.060e-65 Identity = 121/227 (53.30%), Postives = 150/227 (66.08%), Query Frame = 1
Query: 1120 KARQCFGSPAKDRVVVPPAVSRVYGLVQKATGSVGGNGCCGAIYGELTVGSMQKVVNCLKEETGFDENSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVANHRWLLR-----DQGGP----DGVELKKNNLFFAHGDIMSAKTFDPFTHVYMFDVGFPPDTLKAIAKMFNASEARHLISYQNPKKVMQECGFDVEKVLQLPLHLTVSHEGHMMYLYRR 1773
K R FG A + + P V RVY +V + TGS+GGNG GAIYGELTVGSMQK+VN +K TG DENS FIDVG GLGKPN HVAQDPG + SYG+E+E VRW L ++N +LR D+GG G + + AHGDI A+ FDPFTHVYMFD+GFPP +A MFN S + +LI Y PK +++ GFD+E ++QL + S EGHM Y+YRR
Sbjct: 167 KKRNAFGHTAVNAITYPANVKRVYQVVNRQTGSIGGNGHGGAIYGELTVGSMQKMVNMMKVHTGLDENSRFIDVGCGLGKPNMHVAQDPGVQFSYGIEMEHVRWLLGMSNLDQVLREAQRQDRGGSVLDVSGNSIIGHRCTLAHGDITEAQFFDPFTHVYMFDIGFPPRLFYQLADMFNRSSSPYLICYHGPKLMVERYGFDIELIIQLSTSMHGSSEGHMGYIYRR 393
BLAST of mRNA_H-paniculata_contig113.831.1 vs. uniprot
Match: A0A7S3Q7R7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7R7_9STRA) HSP 1 Score: 234 bits (596), Expect = 7.420e-64 Identity = 122/255 (47.84%), Postives = 163/255 (63.92%), Query Frame = 1
Query: 1102 TPTKKTKARQCFG--SPAKDRVVVPPAVSRVYGLVQKATGSVGGNGCCGAIYGELTVGSMQKVVNCLKEETGFDENSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVANHRWLLRDQ-----GGPDGVELKKNNLFFAHGDIMSAKTFDPFTHVYMFDVGFPPDTLKAIAKMFNASEARHLISYQNPKKVMQECGFDVEKVLQLPLHLTVSHEGHMMYLYRRRG--VPAGLKIKSIEKV--DPFFE 1833
+P+K++++R FG V + P VY LV K TGS+GGNG GAIYGELT+GSMQK++N +KE T F+ +S FIDVG GLGKPN HVAQDP E SYG+E+E VRW L ++N + L++ G E ++ AHGDI A+ FDPFTHVYMFD+GFPP K + KMFN S++ +LI Y P ++ GF+VE ++Q P + S EGHM Y+YRR G G ++S++ V DP F+
Sbjct: 129 SPSKRSRSRNYFGRYQQTDTDVTILPKTRTVYKLVNKMTGSIGGNGRGGAIYGELTMGSMQKMINLMKEHTNFNSSSRFIDVGCGLGKPNIHVAQDPQVEFSYGIEMEHVRWVLGMSNLKVSLKEACRQEAEGQTEEECIRHRCMLAHGDITEAQFFDPFTHVYMFDIGFPPKLFKQLGKMFNRSQSEYLICYHRPSLMVDRYGFNVELIIQEPTSMHGSSEGHMGYIYRRVGRKQKIGKGLQSVDGVPCDPLFK 383
BLAST of mRNA_H-paniculata_contig113.831.1 vs. uniprot
Match: B8BQJ6_THAPS (DOT1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQJ6_THAPS) HSP 1 Score: 231 bits (590), Expect = 1.650e-63 Identity = 151/384 (39.32%), Postives = 206/384 (53.65%), Query Frame = 1
Query: 859 SEAATSIPITRYDMLAPATPTRKARRPTTPRTRTPAKSRTPSGGLVAWRLGAAAEDDDDGEIQNLTPNKDRSRRPNRALEMTPTKKTKARQC----FGSPAKDRVVVPPAVSRVYGLVQKATGSVGGNGCCGAIYGELTVGSMQKVVNCLKEETGFDENSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVANHRWLLRDQGGPDGVELKK--------NNLFFAHGDIMSAKTFDPFTHVYMFDVGFPPDTLKAIAKMFNASEARHLISYQNPKKVMQECGFDVEKVLQLPLHLTVSHEGHMMYLYRRRGV-------PAGLKIKSIE-KVDPFFERGVRLCRESTEGGLDDDLAAYVEACFAEHTSGGVRTRTR 1950
++AA S P R +A ++P + + P + RTP + +V + A A + + ++T R + + + +PTK TK FG K + +P VSRVY +V K TGS+GGNG GAIYGEL VGSMQK+ N + E TG + NS FIDVG GLGKPN HVAQ PG E SYG+E+E VRW L +AN +L +Q D V ++ + + AHGDI A FDPFTHVYMFD+GFPP +A+MFN+SE+ +LI Y PK +++ FD+E ++Q P + S E H Y+YRR G K K DP F + LC+ S + + +A +E EH R TR
Sbjct: 7 TKAAASTPTKRSQSVA-SSPIKSSAVPRSKTPRTPQRQSASDRVVVTPSVSAVALEKKKVDEDDITAFNKARRSLDLSAKSSPTKATKESNTRKLPFGGNTKS-IDIPTNVSRVYNIVNKHTGSIGGNGHGGAIYGELRVGSMQKMTNLMMEHTGLNVNSRFIDVGCGLGKPNLHVAQHPGVEFSYGIEMENVRWMLGIANLHQVL-EQAKRDAVNDEEISEDAKIGHACYLAHGDITEANFFDPFTHVYMFDIGFPPLLFHQLAEMFNSSESEYLICYHGPKLMIETYEFDIELLVQTPTSMHGSSEVHTGYIYRRTAENKRKSKKQTGCKSKKYGVPCDPLFAKAWELCK-SDLSEVSEHIAEQIE----EHMGATKRRSTR 382
BLAST of mRNA_H-paniculata_contig113.831.1 vs. uniprot
Match: K0R0G2_THAOC (DOT1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0G2_THAOC) HSP 1 Score: 231 bits (588), Expect = 8.480e-63 Identity = 124/283 (43.82%), Postives = 169/283 (59.72%), Query Frame = 1
Query: 1135 FGSPAKDRVVVPPAVSRVYGLVQKATGSVGGNGCCGAIYGELTVGSMQKVVNCLKEETGFDENSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVANHRWLLR------DQGGPDGVELKKNNLFFAHGDIMSAKTFDPFTHVYMFDVGFPPDTLKAIAKMFNASEARHLISYQNPKKVMQECGFDVEKVLQLPLHLTVSHEGHMMYLYRRRGVPAGLKIKSIEKV----DPFFERGVRLCRESTEGGLDDDLAAYVEACFAEHTSGGVRTRTRR 1953
FG K ++ +P VSRVY +V TGSVGGNG GAIYGELT GSMQK+ N + + T D+ S FIDVG GLGKPN HVAQ PG E SYG+EL RW L ++N + ++ + G G E + L+FAHGDI A FDPFTHVYMFD+GFPP +A+MFN S++ +LI Y PK ++++ GF++E ++Q P + S E H Y+YRR A K +K+ DP F + +C+ + + D A VE+ + + R+ T+R
Sbjct: 134 FGRNVK-QIEIPRNVSRVYKIVHSQTGSVGGNGHGGAIYGELTTGSMQKMTNLMMKHTNLDKTSRFIDVGCGLGKPNLHVAQYPGVEFSYGIELYHTRWMLGMSNLQQVMVAAMSDFENGKDKGDEAIGHRLYFAHGDITEATHFDPFTHVYMFDIGFPPTLFHQLAEMFNNSQSEYLICYHGPKLMIEDYGFNIELIVQTPTSMHGSSEVHTGYIYRRSETAAEAKSCKTKKLGVLCDPLFAKAYEMCQSGLKN-VHDHTNAIVESNWGVSSRRRTRSVTKR 414
BLAST of mRNA_H-paniculata_contig113.831.1 vs. uniprot
Match: A0A7S2YHF8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YHF8_9STRA) HSP 1 Score: 227 bits (579), Expect = 8.860e-61 Identity = 138/336 (41.07%), Postives = 184/336 (54.76%), Query Frame = 1
Query: 976 TPSGGLVAWRLGAAAEDDDDGEIQNLTPNKDRSRRPNRALEMTPTKKTKARQCFGSPAKDRVV--------VPPAVSRVYGLVQKATGSVGGNGCCGAIYGELTVGSMQKVVNCLKEETGFDENSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVANHRWLLRDQGGPDGVELKKNNLFFAHGDIMSAKTFDPFTHVYMFDVGFPPDTLKAIAKMFNASEARHLISYQNPKKVMQECGFDVEKVLQLPLHLTVSHEGHMMYLYRRRGVPAGLKIKS-----IEKVDPFFERGVRLCRESTEGGLDDDLAAYVEACFAEHTSGGVRTR 1944
TP+ + G + + DD TP PN ++ K+ A SPAK R+V V V +VY L++K TGS+GGN G IYGELT+GSMQK+VN +KE T FD +S FIDVGSG+GKPNFHVAQDPG EISYGLE++ RW LS+ R L + V+ + F DI A +FDPFTHVYMF +GFPPD +A ++N S++ +LI Y +PK ++ F+VE + + P + S EGH Y+YRR + +S +E+VDP F G+ R GGL + L +V S G TR
Sbjct: 176 TPAANRIQSAGGDSGDGDDTARRALFTP-------PNSRPQLVTPSKSGASATAQSPAKRRIVFGRYSEIDVTERVKKVYRLIRKLTGSIGGNASNGPIYGELTMGSMQKMVNLMKEHTHFDASSKFIDVGSGIGKPNFHVAQDPGVEISYGLEIDADRWLLSMNCLRGTLDLAAQDEDVQ---HRCVFVQEDIRQAHSFDPFTHVYMFSIGFPPDLWITLADVWNRSKSPYLICYHSPKDIIDCYEFEVELLAKTPTSMHGSKEGHTGYVYRRTTSASTTAAESSTETTVERVDPLFAGGIATIR----GGLSN-LQTWVSTTLNAKMSSGPSTR 496
BLAST of mRNA_H-paniculata_contig113.831.1 vs. uniprot
Match: A0A7S2PSU5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSU5_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.000e-60 Identity = 124/263 (47.15%), Postives = 158/263 (60.08%), Query Frame = 1
Query: 1135 FGSPAKDRVVVPPAVSRVYGLVQKATGSVGGNGCCGAIYGELTVGSMQKVVNCLKEETGFDENSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVANHRWLLR-----------DQGGPDGVELKKNNLFFAHGDIMSAKTFDPFTHVYMFDVGFPPDTLKAIAKMFNASEARHLISYQNPKKVMQECGFDVEKVLQLPLHLTVSHEGHMMYLYRRRGVPAGLKIKSIEKV----DPFFERGVRLCRESTEGGLD 1878
FG+ K + VP V RVY ++ K TGS+GGNG GAIYGELTVGSMQK+ N + E T + S FIDVG GLGKPN HVAQ PG E SYG+E+E VRW L +AN +L+ + G DG +++ + FFAHGDI A FDPFTHVYMFD+GFPP +A+MFN S++ +LI Y PK ++ F+VE ++Q P + S EGH Y+YRR S + DP F + +CRE GLD
Sbjct: 138 FGN--KSTIKVPTNVKRVYEIINKHTGSIGGNGHGGAIYGELTVGSMQKMTNLMIEYTDLSKESRFIDVGCGLGKPNLHVAQYPGVEFSYGIEMEHVRWMLGMANLDQVLKAAQKDIAFEEAKKDGDDGSKIE-HRCFFAHGDITEASFFDPFTHVYMFDIGFPPRLFHQLAEMFNNSQSEYLICYHGPKLMIDRYEFNVELLVQTPTSMHGSAEGHQGYIYRRTKKANKRNSCSTSQFETPCDPLFAKAWEVCRE----GLD 393
BLAST of mRNA_H-paniculata_contig113.831.1 vs. uniprot
Match: A0A0P1A7P9_PLAHL (DOT1 domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7P9_PLAHL) HSP 1 Score: 220 bits (560), Expect = 1.360e-59 Identity = 131/310 (42.26%), Postives = 172/310 (55.48%), Query Frame = 1
Query: 1114 KTKARQCFGSPAK------------DRVVVPPAVSRVYGLVQKATGSVGGNGCCGAIYGELTVGSMQKVVNCLKEETGFDENSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVANHRWLLRDQGGPDGVELKKNNLFFAHGDIMSAKTFDPFTHVYMFDVGFPPDTLKAIAKMFNASEARHLISYQNPKKVMQECGFDVEKVLQLPLHLTVSHEGHMMYLYRRRGVPAGLK-----------------IKSIEKVDPFFERGVRLCRESTEGGLDDDLAAYVEACFAEHTSGGVRTRTRRR 1956
K +AR G+P K +R VS VY ++K TGS+GGN GAIYGE+T S Q+VV+ LKE E+S FIDVGSGLGKPNFHVA DPG ++SYG+ELEE+RW LS+ N R +L + LK + F GDI A TF+PF+HVY FDVGFPPD + +A MFN S A++ S+ P+KV+ GF VE + ++ + S EGH Y YRR G K I S VDP F +G+ L + EG ++ +V FA+ +G RTR ++R
Sbjct: 42 KKRARLSIGTPGKVTPLADIREREVERTFTEHEVSEVYKAIRKQTGSLGGNAAGGAIYGEITQASFQRVVDYLKEFCELSESSRFIDVGSGLGKPNFHVAVDPGVQLSYGIELEELRWHLSLHNLRSVL----SLESQRLKPVSTVFTAGDITHAHTFEPFSHVYSFDVGFPPDVMDKMALMFNRSSAKYYASFHAPRKVVDMYGFAVENIGRVATSMAGSSEGHQCYFYRRLASTGGDKKVKNDKVEAQVSSVSNDINSWIDVDPLFSKGIELLKGGREGMIE-----WVIDFFAQANAG--RTRRQKR 340
BLAST of mRNA_H-paniculata_contig113.831.1 vs. uniprot
Match: G4ZQK7_PHYSP (DOT1 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZQK7_PHYSP) HSP 1 Score: 219 bits (559), Expect = 4.670e-59 Identity = 124/288 (43.06%), Postives = 162/288 (56.25%), Query Frame = 1
Query: 1153 DRVVVPPAVSRVYGLVQKATGSVGGNGCCGAIYGELTVGSMQKVVNCLKEETGFDENSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVANHRWLLRDQGGPDGVELKKNNLF---FAHGDIMSAKTFDPFTHVYMFDVGFPPDTLKAIAKMFNASEARHLISYQNPKKVMQECGFDVEKVLQLPLHLTVSHEGHMMYLYRRRGVPAGLKIKSIE-----------------KVDPFFERGVRLCRESTEGGLDDDLAAYVEACFAEHTSGGVRTRTRRR 1956
+R VS VY ++K TGS+GGN GAIYGE+T S Q+VV+ LKE +S F+DVGSGLGKPNFHVA DPG E+SYG+ELEE+RW LS+ N R +L ++ +KN F GDI A TF+PF+HVY FDVGFPPD + +A MFN S AR+ +S+ +P+KV+ GF VE + ++ + S EGH Y YRR G IE VDP F +G+ L EG LD ++ F + G RTR ++R
Sbjct: 94 ERKFTEHTVSDVYRAIRKQTGSLGGNAAGGAIYGEITQASFQRVVDYLKENCELSTSSRFLDVGSGLGKPNFHVAVDPGVEVSYGIELEELRWHLSLHNLRSVL-------SLDSQKNKCLATVFTAGDITHAHTFEPFSHVYSFDVGFPPDVMDKMADMFNRSTARYFVSFHSPRKVVDAYGFSVENIGRVATSMAGSSEGHQCYFYRRVAPSDGESEPEIEVKPEEMSPLSGGSGQPLTVDPLFRKGIELLNNGREGMLD-----WISDFFGQEVYAG-RTRRQKR 368
BLAST of mRNA_H-paniculata_contig113.831.1 vs. uniprot
Match: A0A6T8H956_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8H956_9STRA) HSP 1 Score: 220 bits (561), Expect = 9.170e-59 Identity = 112/225 (49.78%), Postives = 143/225 (63.56%), Query Frame = 1
Query: 1111 KKTKARQCFGSPAKDRVVVPPAVSRVYGLVQKATGSVGGNGCCGAIYGELTVGSMQKVVNCLKEETGFDENSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVANHRWLLRDQGG----PDGVELKKNNLFFAHGDIMSAKTFDPFTHVYMFDVGFPPDTLKAIAKMFNASEARHLISYQNPKKVMQECGFDVEKVLQLPLHLTVSHEGHMMYLYRR 1773
K K R FG K +V P V Y ++Q+ TG +GGNG GAIYGELT+GSMQK+VN +KE T F+ +S FIDVG GLGKPN HVAQDPG + SYG+E+E VRW + + N +L P ++N AHGDI A TFDPFTHVYMFD+GFPP K ++ MFN S++ LI Y PK +++ FD+E + Q+ + S EGHM YLY+R
Sbjct: 167 KDAKHRMHFGY--KSSIVCQPNVRTAYRIMQRRTGFIGGNGSGGAIYGELTMGSMQKMVNAMKEHTDFNADSRFIDVGCGLGKPNIHVAQDPGVQFSYGIEMERVRWFMGMHNLTHVLEKARSQRCEPSCENTLRHNCILAHGDITEASTFDPFTHVYMFDIGFPPKLFKYLSAMFNRSQSPFLICYHGPKLMIERYKFDLEFITQIQTSMHGSSEGHMGYLYKR 389 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig113.831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig113.831.1 >prot_H-paniculata_contig113.831.1 ID=prot_H-paniculata_contig113.831.1|Name=mRNA_H-paniculata_contig113.831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=532bp MTELAAAVPASPIAKKGVTAEAATAAVVNNDDSPTKHAVVIFDSSAEVEEback to top mRNA from alignment at H-paniculata_contig113:5630..16876- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig113.831.1 ID=mRNA_H-paniculata_contig113.831.1|Name=mRNA_H-paniculata_contig113.831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11247bp|location=Sequence derived from alignment at H-paniculata_contig113:5630..16876- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig113:5630..16876- >mRNA_H-paniculata_contig113.831.1 ID=mRNA_H-paniculata_contig113.831.1|Name=mRNA_H-paniculata_contig113.831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3192bp|location=Sequence derived from alignment at H-paniculata_contig113:5630..16876- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |