prot_H-paniculata_contig30653.8305.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30653.8305.1
Unique Nameprot_H-paniculata_contig30653.8305.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length62
Homology
BLAST of mRNA_H-paniculata_contig30653.8305.1 vs. uniprot
Match: D7G858_ECTSI (Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G858_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 6.760e-32
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0
Query:    1 YDHKEIEGRWQAHWESEGTFKTPMRTEGRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMAR 62
            Y+HK IE RWQ HWE +GTFKTP RTEGRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMAR
Sbjct:   19 YNHKAIEARWQQHWEEKGTFKTPERTEGRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMAR 80          
BLAST of mRNA_H-paniculata_contig30653.8305.1 vs. uniprot
Match: A0A7S0DTQ0_9EUKA (Leucine--tRNA ligase (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DTQ0_9EUKA)

HSP 1 Score: 106 bits (264), Expect = 1.280e-27
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 YDHKEIEGRWQAHWESEGTFKTPMRTEGRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMAR 62
            YD  E+E RWQ  W  E TF TP+R++ +PKK++LDMFPYPSGSGLHVGHPEGYTASDVMAR
Sbjct:   97 YDPSEVEPRWQQRWADEKTFATPIRSQDKPKKYILDMFPYPSGSGLHVGHPEGYTASDVMAR 158          
BLAST of mRNA_H-paniculata_contig30653.8305.1 vs. uniprot
Match: A0A7S2XSK2_9STRA (Leucine--tRNA ligase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSK2_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.070e-25
Identity = 47/62 (75.81%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 YDHKEIEGRWQAHWESEGTFKTPMRTEGRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMAR 62
            Y   EIE RWQA W+ E TFKTP+R   +PKK+VLDMFPYPSG+GLHVGHPEGYTASDVMAR
Sbjct:   84 YPFAEIEKRWQAKWQDEQTFKTPIRNPDKPKKYVLDMFPYPSGAGLHVGHPEGYTASDVMAR 145          
BLAST of mRNA_H-paniculata_contig30653.8305.1 vs. uniprot
Match: A0A7S0LTP1_9EUKA (Leucine--tRNA ligase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LTP1_9EUKA)

HSP 1 Score: 102 bits (255), Expect = 2.630e-25
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 YDHKEIEGRWQAHWESEGTFKTPMRTEGRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMAR 62
            YDH  +EG+WQA+WE   TF T  R EG+ KK+VLDMFPYPSG+GLHVGHPEGYTASD+MAR
Sbjct:   34 YDHAVVEGKWQAYWEESRTFAT-RRREGKEKKYVLDMFPYPSGAGLHVGHPEGYTASDIMAR 94          
BLAST of mRNA_H-paniculata_contig30653.8305.1 vs. uniprot
Match: A0A7S2H5H8_9STRA (Leucine--tRNA ligase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5H8_9STRA)

HSP 1 Score: 101 bits (252), Expect = 7.330e-25
Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 YDHKEIEGRWQAHWESEGTFKTPMRTEGRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMAR 62
            Y   ++E +WQA W  E TF+TP+R   +PKK+VLDMFPYPSG+GLHVGHPEGYTASD+MAR
Sbjct:   65 YPFTKVEAKWQARWAEEKTFQTPVRDTSKPKKYVLDMFPYPSGAGLHVGHPEGYTASDIMAR 126          
BLAST of mRNA_H-paniculata_contig30653.8305.1 vs. uniprot
Match: A0A7C2NWB0_9GAMM (Leucine--tRNA ligase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C2NWB0_9GAMM)

HSP 1 Score: 100 bits (249), Expect = 9.510e-25
Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 0
Query:    1 YDHKEIEGRWQAHWESEGTFKTPMRTE-GRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMAR 62
            Y  KEIE +WQAHWES+ TF+ P   +  +PK +VLDMFPYPSG+GLHVGHPEGYTASD++AR
Sbjct:    4 YPFKEIEAKWQAHWESQATFRVPKTVDTSKPKYYVLDMFPYPSGAGLHVGHPEGYTASDIVAR 66          
BLAST of mRNA_H-paniculata_contig30653.8305.1 vs. uniprot
Match: A0A1E7FAE0_9STRA (Leucine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAE0_9STRA)

HSP 1 Score: 104 bits (260), Expect = 9.790e-25
Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 YDHKEIEGRWQAHWESEGTFKTPMRTEGRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMAR 62
            Y   ++E +WQA+WE   TFKTP+R   +PKK+VLDMFPYPSG+GLHVGHPEGYTASD+MAR
Sbjct:   52 YPFAQVETKWQAYWEENNTFKTPVRDTSKPKKYVLDMFPYPSGAGLHVGHPEGYTASDIMAR 113          
BLAST of mRNA_H-paniculata_contig30653.8305.1 vs. uniprot
Match: A0A7S2YMF4_9STRA (Leucine--tRNA ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMF4_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.400e-24
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    1 YDHKEIEGRWQAHWESEGTFKTPMRTEGRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMAR 62
            Y   E+E +WQ +W+   TFKTP R   +PKK+VLDMFPYPSG+GLHVGHPEGYTASDVMAR
Sbjct:   70 YPFAEVEPKWQKYWKDNHTFKTPERDTSKPKKYVLDMFPYPSGAGLHVGHPEGYTASDVMAR 131          
BLAST of mRNA_H-paniculata_contig30653.8305.1 vs. uniprot
Match: A0A448Z2U8_9STRA (Leucine--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z2U8_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.830e-24
Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 YDHKEIEGRWQAHWESEGTFKTPMRTEGRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMAR 62
            Y  +E+E +WQ +WE   TFKTP R   +PKK+VLDMFPYPSG+GLHVGHPEGYTASDVMAR
Sbjct:   67 YPFQEVEPKWQKYWEENNTFKTPERDTSKPKKYVLDMFPYPSGAGLHVGHPEGYTASDVMAR 128          
BLAST of mRNA_H-paniculata_contig30653.8305.1 vs. uniprot
Match: A0A7S4AJT1_9STRA (Leucine--tRNA ligase n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AJT1_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.400e-24
Identity = 44/62 (70.97%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    1 YDHKEIEGRWQAHWESEGTFKTPMRTEGRPKKFVLDMFPYPSGSGLHVGHPEGYTASDVMAR 62
            Y   E+E +WQ +WE   TFKTP R   +PKK+VLDMFPYPSG+GLHVGHPEGYTASDVMAR
Sbjct:   67 YPFAEVEPKWQKYWEENNTFKTPERDTSKPKKYVLDMFPYPSGAGLHVGHPEGYTASDVMAR 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30653.8305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G858_ECTSI6.760e-3288.71Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S0DTQ0_9EUKA1.280e-2772.58Leucine--tRNA ligase (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S2XSK2_9STRA2.070e-2575.81Leucine--tRNA ligase n=1 Tax=Attheya septentrional... [more]
A0A7S0LTP1_9EUKA2.630e-2572.58Leucine--tRNA ligase (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S2H5H8_9STRA7.330e-2567.74Leucine--tRNA ligase (Fragment) n=1 Tax=Helicothec... [more]
A0A7C2NWB0_9GAMM9.510e-2568.25Leucine--tRNA ligase (Fragment) n=1 Tax=Gammaprote... [more]
A0A1E7FAE0_9STRA9.790e-2569.35Leucine--tRNA ligase n=1 Tax=Fragilariopsis cylind... [more]
A0A7S2YMF4_9STRA1.400e-2469.35Leucine--tRNA ligase (Fragment) n=1 Tax=Amphiprora... [more]
A0A448Z2U8_9STRA1.830e-2470.97Leucine--tRNA ligase n=1 Tax=Pseudo-nitzschia mult... [more]
A0A7S4AJT1_9STRA3.400e-2470.97Leucine--tRNA ligase n=2 Tax=Pseudo-nitzschia aust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 29..62
e-value: 7.5E-22
score: 79.2
NoneNo IPR availableGENE3D1.10.730.10coord: 1..28
e-value: 7.5E-22
score: 79.2
NoneNo IPR availablePANTHERPTHR43740:SF6LEUCINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIALcoord: 1..62
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 1..62
IPR002302Leucine-tRNA ligasePANTHERPTHR43740FAMILY NOT NAMEDcoord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30653contigH-paniculata_contig30653:2355..2540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30653.8305.1mRNA_H-paniculata_contig30653.8305.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30653 2355..2540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30653.8305.1 ID=prot_H-paniculata_contig30653.8305.1|Name=mRNA_H-paniculata_contig30653.8305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=62bp
YDHKEIEGRWQAHWESEGTFKTPMRTEGRPKKFVLDMFPYPSGSGLHVGH
PEGYTASDVMAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR002302Leu-tRNA-ligase