prot_H-paniculata_contig3064.8302.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3064.8302.1
Unique Nameprot_H-paniculata_contig3064.8302.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1280
Homology
BLAST of mRNA_H-paniculata_contig3064.8302.1 vs. uniprot
Match: D8LID0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID0_ECTSI)

HSP 1 Score: 521 bits (1342), Expect = 3.570e-160
Identity = 343/575 (59.65%), Postives = 394/575 (68.52%), Query Frame = 0
Query:  195 PAPLVPALLAXXXXXXXXXRVKKGDVETGGASEASVLEDAPDKTIMEMVQAYLKKQDMSTRVTLIALLLMLCVGVFGVYVLIFYKAVQDKNAKYIVLCVAFSLIIGWVTWKYCFSGDEKLQDQSAIAQDIATLYAAIPDHTALRGVSVRGRAQFTDFKYEKSEMMFTAVTDDGVSLGSERGSELMMEGADPACPLCNVAYMEGAELCLLPCLHVFHKNCIHKWCNKHIVCPLCKRHLEAPEPIHNLTAATGYPATGA-QSEPGRHPRGASGRNGTWRNMLGASQPGPASGHGSERGLGGTRSEDGLWNDRVLNAAQHQQLGRGHNRVTSFSSETRR----------QTGRGRSGTPSRGPPQSGSSGSRAAPXXXXXXXXXXXXXXXXSKVRSKSVGGHGGHSRSERGXXXXXXXXXXXXXXXXXXFTTASE--RGRGGSGRVAHGTRAERGGA-TLRFGDTG-SPRSRSDLGVGSSDS---RGHSDAQLSRHAMR--HAGAGIKPI--KKMFAEDGTGGN--WASNGSVSEAGSDVDVVQRRRTAESTASSKSSSRRGAPSQGQRSAVITVRKV 745
            PAPLVPALLA   XXXXXXR    DVE G A E  VLEDAPDKT+MEM+Q YLKKQD+ TR+ L+ +LL+L  GV G YV++ + A+ +++ KY VL   FS+++ WV WKYCFSGD+KLQDQS IAQDIATLYAAIPDHTA++GVS +GRAQFTDFKYEKSEMMFTAVTDDGVSLGSERGSELMM+GADP+CPLCN AY+EGAELCLLPCLHVFHK CI+KWCN+HIVCPLCKRHLEA EP+H LTA+  +P   A QSEPG    G   +   WR +LG + PGPAS HGSERGLGGTRSEDG+WNDRVLNAAQ QQ+G  HNRVTSFSSETRR          + G GR G    GPP S S+G+   P                   R +SV G  G  +          XXXXXXXXXXXX TTA+E  RGRGGSGRVAHGT   R  A +L  GD   SPRSRSDLGVGS D+   R +SDA LSRHA R  +   G K +  K MF +D TGG   W ++G    A        RR  A ++A  +S    G  S  Q  AVITV KV
Sbjct:  178 PAPLVPALLAPVPXXXXXXRAA-ADVEAGEAGE--VLEDAPDKTLMEMLQTYLKKQDLYTRIVLVVVLLVLAGGVLGAYVVMLWSAISEESVKYTVLVSVFSVVLFWVLWKYCFSGDQKLQDQSQIAQDIATLYAAIPDHTAVKGVSEKGRAQFTDFKYEKSEMMFTAVTDDGVSLGSERGSELMMDGADPSCPLCNKAYVEGAELCLLPCLHVFHKTCINKWCNRHIVCPLCKRHLEAAEPLHTLTASYNHPGGNAVQSEPGHRGYGNGHQRHQWRGVLGNTAPGPASAHGSERGLGGTRSEDGMWNDRVLNAAQQQQMGGKHNRVTSFSSETRRSNNARGRPGERVGSGRGG----GPPHSSSAGAGMGPQ------------------RPQSVSGSAGWQQXXX-------XXXXXXXXXXXXXTTATEQQRGRGGSGRVAHGTARHRSSAGSLARGDLSTSPRSRSDLGVGSRDAENMRANSDAMLSRHASRRNNGAGGTKTLTMKPMFHDD-TGGTEAWDADGGGGGAEEVKGEPGRRMAAIASAPGRS----GLHSSRQGPAVITVHKV 715          
BLAST of mRNA_H-paniculata_contig3064.8302.1 vs. uniprot
Match: A0A6H5JTX8_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX8_9PHAE)

HSP 1 Score: 509 bits (1312), Expect = 1.630e-155
Identity = 337/563 (59.86%), Postives = 386/563 (68.56%), Query Frame = 0
Query:  195 PAPLVPALLAXXXXXXXXXRVKKGDVETGGASEASVLEDAPDKTIMEMVQAYLKKQDMSTRVTLIALLLMLCVGVFGVYVLIFYKAVQDKNAKYIVLCVAFSLIIGWVTWKYCFSGDEKLQDQSAIAQDIATLYAAIPDHTALRGVSVRGRAQFTDFKYEKSEMMFTAVTDDGVSLGSERGSELMMEGADPACPLCNVAYMEGAELCLLPCLHVFHKNCIHKWCNKHIVCPLCKRHLEAPEPIHNLTAATGYPATGA-QSEPGRHPRGASGRNGTWRNMLGASQPGPASGHGSERGLGGTRSEDGLWNDRVLNAAQHQQLGRGHNRVTSFSSETRRQTGRGRSGTPSRGPPQSGSSGSRAAPXXXXXXXXXXXXXXXXSKVRSKSVGGHGGHSRSERGXXXXXXXXXXXXXXXXXXFT--TASERGRGGSGRVAHGTRAERGGA-TLRFGDTG-SPRSRSDLGVGSSDS---RGHSDAQLSRHA--MRHAGAGIKPI--KKMFAEDGTGGNWASNGSVSEAGSDVDVVQRRRTAESTASSKSSSRRGAPSQGQRSAVITVRKV 745
            PAPLVPALLA   XXXXX R    D+E G A E  VLEDAPDKT+MEM+Q YLKKQD+ TR+ L+ +LL+L  G  G YV++ + A+ +KN KY VL   FS+++ WV WKYCFSGD+KLQDQS IAQDIATLYAAIPDHTA++GVS +GRAQFTDFKYEKSEMMFTAVTDDGVSLGSERGSELMM+GADP+CPLCN  Y+EGAELCLLPCLHVFHK CI+KWCN+HIVCPLCKRHLEA EP+H LTA+  +P     QSEPG    G   +   WR MLG + PGPAS HGSERGLGGTRSEDG+WNDRVLNAAQ QQ+G  HNRVTSFSSETRR          +RG P     G RA             XXXXX   R  SV G  G  +    XXXXXXXXXXXXXXXXXX    T  +RGRGGSGRVAHGT   R  A +L  GD   SPRSRSDLGVGS ++   R +SDA LSRHA  M +   G K +  K M  +D +   W        +G   + V+        A++ +S R G  S  Q  AVITV KV
Sbjct:  176 PAPLVPALLAPVPXXXXXRRAA-ADIEAGEAGE--VLEDAPDKTLMEMLQTYLKKQDLYTRMVLVVVLLVLAGGALGAYVVMLWYAISEKNVKYTVLVSVFSVVLLWVLWKYCFSGDQKLQDQSQIAQDIATLYAAIPDHTAVKGVSEKGRAQFTDFKYEKSEMMFTAVTDDGVSLGSERGSELMMDGADPSCPLCNKVYVEGAELCLLPCLHVFHKTCINKWCNRHIVCPLCKRHLEAAEPLHTLTASYNHPGDNTVQSEPGHRGYGNGQQRHQWRGMLGNAAPGPASAHGSERGLGGTRSEDGMWNDRVLNAAQRQQMGGKHNRVTSFSSETRRSNN-------ARGRP-----GERAGSGRGGGPPHSSSXXXXXXXXRPHSVSGSTGRQQXXXXXXXXXXXXXXXXXXXXXXXXXXTEQQRGRGGSGRVAHGTARHRSSAGSLARGDLSTSPRSRSDLGVGSREAENMRANSDAILSRHAGRMNNGAGGTKTLTMKPMLHDDTS---WTEAWDADGSGGGAEEVKGEAGRRMAATASASGRSGLHSSRQGPAVITVHKV 720          
BLAST of mRNA_H-paniculata_contig3064.8302.1 vs. uniprot
Match: UPI00053FA57D (E3 ubiquitin-protein ligase At4g11680 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FA57D)

HSP 1 Score: 66.2 bits (160), Expect = 1.050e-7
Identity = 35/99 (35.35%), Postives = 48/99 (48.48%), Query Frame = 0
Query:  335 TALRGVSVRGRAQFTDFKYEKSEMMFTAVTDDGVSLGSERGSELMMEGADPACPLCNVAYMEGAELCLLPCLHVFHKNCIHKWCNKHIVCPLCKRHLEA 433
            T   G S     Q   +++ +S     +   D V        EL ++  D  C +C   YMEGAELC LPC H FH  CI +W   +  CPLCK +++A
Sbjct:  216 TIREGASEDEIRQLPKYRFHQSHASRMSANTDAVD-------ELALQFEDSECCICLSRYMEGAELCTLPCNHSFHYGCISRWLRINATCPLCKYNIKA 307          
BLAST of mRNA_H-paniculata_contig3064.8302.1 vs. uniprot
Match: A0A803LT96_CHEQI (RING-type domain-containing protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LT96_CHEQI)

HSP 1 Score: 62.8 bits (151), Expect = 2.240e-7
Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 0
Query:  368 VSLGSERGS-ELMMEGADPACPLCNVAYMEGAELCLLPCLHVFHKNCIHKWCNKHIVCPLCKRHLEA 433
            V LG+   + EL M+  +  C +C   Y+EGAELC LPC H FH  CI +W   +  CPLCK +++A
Sbjct:  108 VDLGNMNAADELAMQFENSECCICLSRYVEGAELCTLPCNHNFHYGCISRWLRINATCPLCKFNIKA 174          
BLAST of mRNA_H-paniculata_contig3064.8302.1 vs. uniprot
Match: A0A6A4LC07_9ERIC (RING-type domain-containing protein (Fragment) n=2 Tax=Rhododendron TaxID=4346 RepID=A0A6A4LC07_9ERIC)

HSP 1 Score: 64.3 bits (155), Expect = 4.020e-7
Identity = 28/58 (48.28%), Postives = 34/58 (58.62%), Query Frame = 0
Query:  371 GSERGSELMMEGADPACPLCNVAYMEGAELCLLPCLHVFHKNCIHKWCNKHIVCPLCK 428
            GS+   EL +   D  C +C   Y++GAELC LPC H FH  CI KW   +  CPLCK
Sbjct:  234 GSDSTPELPLHSEDSECCICLHQYVDGAELCALPCRHHFHVGCISKWLRINATCPLCK 291          
BLAST of mRNA_H-paniculata_contig3064.8302.1 vs. uniprot
Match: UPI000C1D416E (E3 ubiquitin-protein ligase At4g11680-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D416E)

HSP 1 Score: 61.2 bits (147), Expect = 4.910e-7
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 0
Query:  372 SERGSELMMEGADPACPLCNVAYMEGAELCLLPCLHVFHKNCIHKWCNKHIVCPLCKRHLEAPEPI 437
            S   +EL +   D  C +C   Y++G ELC LPC H FH +CI KW + +  CPLCK ++ + E +
Sbjct:   93 SNSPTELALHLEDSECCICLYRYVDGVELCRLPCNHHFHHSCISKWLHINATCPLCKFNILSAETL 158          
BLAST of mRNA_H-paniculata_contig3064.8302.1 vs. uniprot
Match: A0A8M8UUS2_SESIN (E3 ubiquitin protein ligase RIE1 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A8M8UUS2_SESIN)

HSP 1 Score: 64.3 bits (155), Expect = 6.180e-7
Identity = 31/84 (36.90%), Postives = 46/84 (54.76%), Query Frame = 0
Query:  354 EKSEMMFTAVTDDGVSLGSERGSELMMEGADPACPLCNVAYMEGAELCLLPCLHVFHKNCIHKWCNKHIVCPLCKRHLEAPEPI 437
            +K E+  TA+  + +       +EL++   D  C +C   Y++GAELC LPC H FH  CI KW   +  CPLCK ++   E +
Sbjct:  276 KKQEVKLTALPGNSIYT-----AELVLHPEDSECCICLYKYVDGAELCTLPCNHHFHHKCITKWLRINATCPLCKFNIHRGETL 354          
BLAST of mRNA_H-paniculata_contig3064.8302.1 vs. uniprot
Match: A0A3Q7IKW3_SOLLC (RING-type domain-containing protein n=6 Tax=Solanum TaxID=4107 RepID=A0A3Q7IKW3_SOLLC)

HSP 1 Score: 63.9 bits (154), Expect = 7.170e-7
Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 0
Query:  377 ELMMEGADPACPLCNVAYMEGAELCLLPCLHVFHKNCIHKWCNKHIVCPLCK 428
            EL ++  D  C +C   Y+EGAELC+LPC H FH  CI KW   +  CPLCK
Sbjct:  274 ELALKPDDSECCICLYKYVEGAELCVLPCNHHFHNGCISKWLRINATCPLCK 325          
BLAST of mRNA_H-paniculata_contig3064.8302.1 vs. uniprot
Match: A0A5A7R5D4_STRAF (RING/U-box superfamily protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7R5D4_STRAF)

HSP 1 Score: 63.2 bits (152), Expect = 1.470e-6
Identity = 32/74 (43.24%), Postives = 39/74 (52.70%), Query Frame = 0
Query:  355 KSEMMFTAVTDDGVSLGSERGSELMMEGADPACPLCNVAYMEGAELCLLPCLHVFHKNCIHKWCNKHIVCPLCK 428
            K E+  TA+  +     S   SEL +   D  C +C   Y+ GAELC LPC H FH  CI KW   +  CPLCK
Sbjct:  279 KQEVNLTALPGN-----SNSTSELFLNPEDSECCICLYKYVNGAELCTLPCNHHFHHKCITKWLRINATCPLCK 347          
BLAST of mRNA_H-paniculata_contig3064.8302.1 vs. uniprot
Match: UPI000C1D4D8B (E3 ubiquitin protein ligase RIE1-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D4D8B)

HSP 1 Score: 62.8 bits (151), Expect = 1.620e-6
Identity = 33/79 (41.77%), Postives = 41/79 (51.90%), Query Frame = 0
Query:  350 DFKYEKSEMMFTAVTDDGVSLGSERGSELMMEGADPACPLCNVAYMEGAELCLLPCLHVFHKNCIHKWCNKHIVCPLCK 428
            D K E  E+  T+ +DD     S   +EL +   D  C +C   Y++G ELC LPC H FH  CI KW      CPLCK
Sbjct:  248 DMKQE--EVSITSQSDD-----SNLAAELTLNPEDSECCICLYKYVDGVELCTLPCNHHFHHTCIGKWLQISATCPLCK 319          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3064.8302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LID0_ECTSI3.570e-16059.65RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JTX8_9PHAE1.630e-15559.86RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI00053FA57D1.050e-735.35E3 ubiquitin-protein ligase At4g11680 n=1 Tax=Beta... [more]
A0A803LT96_CHEQI2.240e-744.78RING-type domain-containing protein n=1 Tax=Chenop... [more]
A0A6A4LC07_9ERIC4.020e-748.28RING-type domain-containing protein (Fragment) n=2... [more]
UPI000C1D416E4.910e-740.91E3 ubiquitin-protein ligase At4g11680-like n=1 Tax... [more]
A0A8M8UUS2_SESIN6.180e-736.90E3 ubiquitin protein ligase RIE1 n=1 Tax=Sesamum i... [more]
A0A3Q7IKW3_SOLLC7.170e-751.92RING-type domain-containing protein n=6 Tax=Solanu... [more]
A0A5A7R5D4_STRAF1.470e-643.24RING/U-box superfamily protein n=1 Tax=Striga asia... [more]
UPI000C1D4D8B1.620e-641.77E3 ubiquitin protein ligase RIE1-like n=1 Tax=Olea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 387..427
e-value: 0.0026
score: 27.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 386..428
e-value: 9.0E-8
score: 32.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 387..428
score: 12.047
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 354..434
e-value: 9.7E-13
score: 49.6
NoneNo IPR availablePANTHERPTHR45977FAMILY NOT NAMEDcoord: 271..431
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..276
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 288..304
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..255
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 277..287
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 305..1279
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 383..436
NoneNo IPR availableTMHMMTMhelixcoord: 285..304
NoneNo IPR availableTMHMMTMhelixcoord: 256..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3064contigH-paniculata_contig3064:5840..16870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3064.8302.1mRNA_H-paniculata_contig3064.8302.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3064 5468..16870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3064.8302.1 ID=prot_H-paniculata_contig3064.8302.1|Name=mRNA_H-paniculata_contig3064.8302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1280bp
MSAQHKRGPKSSGRTAAGHVRRSSDEGKVTPAFHAGVNPLYGSNISARSA
SSQVMNPDQENGGGHPPTNKITSSSQAVSTKSSATGNPARRTRSTSVKHS
RRPKPAQHSAANGGGHGAVSGSRSNPHSGSPHSVMTTSTMQSSTSSRAGK
RPGSAAVAQGNRKGGNRVSGGGGGVSRKVTKKAANGRPEESVGGPAPLVP
ALLAPVPPPPPKRRVKKGDVETGGASEASVLEDAPDKTIMEMVQAYLKKQ
DMSTRVTLIALLLMLCVGVFGVYVLIFYKAVQDKNAKYIVLCVAFSLIIG
WVTWKYCFSGDEKLQDQSAIAQDIATLYAAIPDHTALRGVSVRGRAQFTD
FKYEKSEMMFTAVTDDGVSLGSERGSELMMEGADPACPLCNVAYMEGAEL
CLLPCLHVFHKNCIHKWCNKHIVCPLCKRHLEAPEPIHNLTAATGYPATG
AQSEPGRHPRGASGRNGTWRNMLGASQPGPASGHGSERGLGGTRSEDGLW
NDRVLNAAQHQQLGRGHNRVTSFSSETRRQTGRGRSGTPSRGPPQSGSSG
SRAAPAAAGTTGGGGPGGGGGSKVRSKSVGGHGGHSRSERGHGRGAGPGS
GYQRQRSSSFTTASERGRGGSGRVAHGTRAERGGATLRFGDTGSPRSRSD
LGVGSSDSRGHSDAQLSRHAMRHAGAGIKPIKKMFAEDGTGGNWASNGSV
SEAGSDVDVVQRRRTAESTASSKSSSRRGAPSQGQRSAVITVRKVKDASA
RQAGSAGRGRTSTRRDVFRSGGSDTDASKQEVSRTGDDDSSPEQKTKALT
YGPRKPRVSSSKRRSNSVGHRRISSTGSTSAEESSASVRKPRRRIVPVSA
EGEKGNNSTAVATAEAAANFLNRTTKSKEKGWKVGVRSASEGRNAAESSQ
EEGTRRSLEGAYGHSSGGEGGDSSSDNRPRSIVRRRLSSKKGATSARTPS
AMATSAAGAGTTAQRRHTHPIPKQTPPKPGPTTKGTPAPPMAPARVASWN
VVGSGLPPPPPSASVPTASSELNEADPYQSKDSSGQDREEGPTIAQPQPH
QQNGSSLPADKSSSPVDKSSQGGRDSQAQTETLSTSAQEESSNSMSPQRN
SSGGSRGWSLRIPSTESSEYFVGGITIDGDTTGAGGGGPDGEQSGTAVVG
GGPGISLASKVFSPPSGSRFSLGGFGSGFASGRLFGSSGVGKAGVGKSSV
SMVSDSDEERHGHGSSEGGVRKSISVQELIRTYEKPRLPCDDRDDKYASD
VGPSTLAFTSSSSSLLAPASNRNSGNFRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD