mRNA_H-paniculata_contig3061.8297.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3061.8297.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI) HSP 1 Score: 588 bits (1516), Expect = 1.240e-201 Identity = 329/609 (54.02%), Postives = 412/609 (67.65%), Query Frame = 1
Query: 1 PKETTQEQTFAQEQREILKPKQGALNSACQSRGVLMLYFALVEDGNSMEDSVKQTAAVLRISWDKVREIR-NVWEDEKLRVTIGTGRGTVAEGGEDGRKKLSPEQEARLRAFISGIHEQGKQVWRRTAGEEIQRTQQHDMDKRIAREGQDDPPESPPDRMSNRAVGGLLYRLGYRRRRGRIKVPALNAQRMARIRQFIVEYDRVVKLEESEIHVRAFMDGSFCNQAHDSAYSYFGTDKDGVVQDGFGRTSGKGLRMIMVNAITRFGVLATTEFKGFGIKEGWFKDKTDKGTKRNGRGSVSDETTAEMLWQARRAMGDYHDAMTDKMFMDWLEHRLKPALKEMFPNKKMILVLENASFHHGYDPEVGVPKTNSKKYNVDLLPKFEGKSIAASRKIEWVNEGGKKVDKVVLQNFEVPAEGSFPNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERMEAFMSKEGRELIRTPPYMPSFQPIELFWQHGKQYVSFNYTSGRSILEVWEQIRLGWYGDPNWTGQKGGWKASNCANLVRHADEEINKWIADRDPVLKGNLGNLN-LPVSYKENVDRVANGI-EDGVGEHMFLEETGE-ADVVEEGGHDGDAEV 1815
P++ +EQ AQ QR+ L P+ G+L QSR +L+ YF LV+ G +V++TA+ LR+ DKV ++R + WE +L + GRG + G+DGRK L Q A LRAFIS HE G+QV+RRT E I+ T D+ SNRAVGGLLYR+GYRRRRGRIK+P LN R ARIR+F+VE + EE E V +MD SFC+Q H SAYSYF TD DGVVQDG GRTSGKGLRMIMV+AIT+ G LA + F I EGWFK K DKG R G GS+ E TAEMLWQA+RA GDYHDAMTDKMFM+WLE RL PA K + NKKMILVL+NAS+HHGYD EVGVP++NSK YN LL K++ + I R++ + G + K F+VPA G+FP NSKCG G+S EVA ATRAF Q KHP +L+E++E FM+ G +LI TPPYMPSFQPIELFWQHGKQYVSFN+ + R++ EVW Q+R GWYGDP W GQKGGWK ++C+ LV HA +E+NKW+A DPVL+G +G L +P SY+++ + + +DGV LE + E + + + DGDAEV
Sbjct: 75 PQQEAREQQAAQ-QRDDLAPRTGSLLDTSQSRSILLTYFELVQSGVEPNKAVQRTASTLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSS--GKDGRKLLDDVQCANLRAFISDKHENGQQVFRRTVREWIKETCNKDL--------------------SNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDDGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDENNFPIPEGWFKPK-DKGKGRQGAGSMGTEETAEMLWQAKRATGDYHDAMTDKMFMEWLERRLAPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVEREV--TSSAGVRSKKYT---FQVPATGTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWQLIWTPPYMPSFQPIELFWQHGKQYVSFNFKTKRTMAEVWAQVRKGWYGDPTWEGQKGGWKPADCSKLVAHAVKEMNKWVAS-DPVLRGQMGALEEIPESYEDDAPGHNDIVHDDGVEAQEQLELSAEFMECMGDEDADGDAEV 653
BLAST of mRNA_H-paniculata_contig3061.8297.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 533 bits (1374), Expect = 6.810e-180 Identity = 305/575 (53.04%), Postives = 385/575 (66.96%), Query Frame = 1
Query: 52 LKPKQGALNSACQSRGVLMLYFALVEDGNSMEDSVKQTAAVLRISWDKVREIRNVWEDEK-LRVTIGTGRGTVAEGGEDGRKKLSPEQEARLRAFISGIHEQGKQVWRRTAGEEIQRTQQHDMDKRIAREGQDDPPESPPDRMSNRAVGGLLYRLGYRRRRGRIKVPALNAQRMARIRQFIVEYDRVVKLEESEIHVRAFMDGSFCNQAHDSAYSYFGTDKDGVVQDGFGRTSGKGLRMIMVNAITRFGVLATTEFKGFGIKEGWFKDKTDKGTKRNGRGSVSDETTAEMLWQARRAMGDYHDAMTDKMFMDWLEHRLKPALKEM--FPNKKMILVLENASFHHGYDPEVGVPKTNSKKYNVDLLPKFEGKSIAASRKIEWVNEGGKKVDKVVLQNFEVPAE--GSFPNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERMEAFMSKEGRELIRTPPYMPSFQPIELFWQHGKQYVSFNYTSGRSILEVWEQIRLGWYGDPNWTGQKGGWKASNCANLVRHADEEINKWIADRDPVLKGNLGNLNLPVSY-KENVDRVANGIEDGVGEHMFLE 1758
+KPK+G + + QSR VLML F L ++G S ++V Q A +I DKVR I N W D + L T GRG +A+ +DGR++L+ Q +LR FI+ H+ G+QV+RRT E + RT ++ SNR+VGGLL RLGY+RRRGRIK P LNA+R+ARIR+F+VE D + E++ + V +MD SF +QAH S YSYF +D++GVVQDG GRT+GKGLRMIMV+AIT++G LA GF I+EGWFK+ T G K+ + DE TAE LWQA+ A GDYH AMTD MFM+WLEHRL PA + F KKMILVL+NAS+HHG+D EV VP+TN+KK+NVDLL KF KSI RK E G V NFEVP+E SFP N + G+S+ EVA ATR +I+ +PERL ER+ FM K+G LI TPPYMPSFQPIELFWQHGKQYVS N+ R + EVW QIR GWYGD W+GQ+GGWKA+NC+ LV HA E+NKW+ DRD L G +GNL P Y K++V V + +E+GVGE + E
Sbjct: 125 VKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKE-DDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRT-------------------CNMEQPSNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKF-CDGFPIEEGWFKE-TGSGKKK-----MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRK---EGEQG-----FVEHNFEVPSEPGSSFPAGNRE--GGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGDKEWSGQEGGWKAANCSKLVEHAIGEMNKWVRDRDAGLSGKIGNLQKPDGYDKDDVSPVGD-VEEGVGEQIQQE 661
BLAST of mRNA_H-paniculata_contig3061.8297.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE) HSP 1 Score: 512 bits (1318), Expect = 6.500e-172 Identity = 287/583 (49.23%), Postives = 382/583 (65.52%), Query Frame = 1
Query: 28 FAQEQREILKPKQGALNSACQSRGVLMLYFALVEDGNSMEDSVKQTAAVLRISWDKVREIRNVWED-EKLRVTIGTGRGTVAEGGEDGRKKLSPEQEARLRAFISGIHEQGKQVWRRTAGEEIQRTQQHDMDKRIAREGQDDPPESPPDRMSNRAVGGLLYRLGYRRRRGRIKVPALNAQRMARIRQFIVEYDRVVKLEESEIHVRAFMDGSFCNQAHDSAYSYFGTDKDGVVQDGFGRTSGKGLRMIMVNAITRFGVLATTEFKGFGIKEGWFKDKTDKGTK-RNGRGS--VSDETTAEMLWQARRAMGDYHDAMTDKMFMDWLEHRLKPALKEMFPNKKMILVLENASFHHGYDPEVGVPKTNSKKYNVDLLPKFEGKSIAASRKIEWVNEGGKKVDKVVLQNFEVPAEGSFPNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERMEAFMSKEGRELIRTPPYMPSFQPIELFWQHGKQY--VSFNYTSGRSILEVWEQIRLGWYGDPNWTGQKGGWKASNCANLVRHADEEINKWIADRDPVLKGNLGNLNLPVS-YKENV--DRVANGIEDGVGEHM 1749
F ++ + L+PK G L + QSR +LMLYF LV+ G+S + +Q A LRI DKV +R +W D ++L T G GRG A +DGR+ ++ EQE LR FI G HE G+QV+RRT + ++ + +M SNRAVGGLL RLG++RRRGRIK+P LN +R RIR F+V+ D + E++ I V +MD SF +QAH SAYSYF +D G+VQDG GRT+GKGLRMIMV+AIT G LA + +GF I+EGWFK K ++ K + G +SDE TAE LWQA+ A GDYH+AMTD MFM WL+HRL PA F NKKM LVL+NAS+HH +D EV VP+TNSKKYNV+LL K+ S +R+ E K NFEVPA+GS PN N G+SKEE+A+ TR + ++ P++L E+ E +M ++G LI TPPYMP+FQPIELFWQHGK Y VS ++ GR++L+VW++IRLGWYGDP W GQ+ GWKA+NC LV+HA ++++WI L G +G+L PV+ Y+E D + +G+E+ E +
Sbjct: 83 FVEDSVQSLRPKTGELTTLQQSRIILMLYFDLVKGGSSENHAKEQVAKTLRIGTDKVLAVRTLWYDKQELYETNGKGRGK-ATSVDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEM--------------------SNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQ-EGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEG---------KAAEYNFEVPAQGSLPNANRN---GVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYHYVSIHFEKGRNVLDVWKKIRLGWYGDPEWDGQERGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQEATAEDEIEDGVEEQTDEWL 631
BLAST of mRNA_H-paniculata_contig3061.8297.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 510 bits (1314), Expect = 2.520e-171 Identity = 291/562 (51.78%), Postives = 365/562 (64.95%), Query Frame = 1
Query: 88 QSRGVLMLYFALVEDGNSMEDSVKQTAAVLRISWDKVREIRNVWEDEKLRVTI-GTGRGTVAEGGEDGRKKLSPEQEARLRAFISGIHEQGKQVWRRTAGEEIQRTQQHDMDKRIAREGQDDPPESPPDRMSNRAVGGLLYRLGYRRRRGRIKVPALNAQRMARIRQFIVEYDRVVKLEESEIHVRAFMDGSFCNQAHDSAYSYFGTDKDGVVQDGFGRTSGKGLRMIMVNAITRFGVLATTEFKGFGIKEGWFKDKTDKGTKRNGRGSVSDETTAEMLWQARRAMGDYHDAMTDKMFMDWLEHRLKPALKEM--FPNKKMILVLENASFHHGYDPEVGVPKTNSKKYNVDLLPKFEGKSIAASRKIEWVNEGGKKVDKVVLQNFEVPAE--GSFPNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERMEAFMSKEGRELIRTPPYMPSFQPIELFWQHGKQYVSFNYTSGRSILEVWEQIRLGWYGDPNWTGQKGGWKASNCANLVRHADEEINKWIADRDPVLKGNLGNLNLPVSYKENVDRVANGIEDGVGEHMFLE 1758
+SR VLML F L + G S +++V + A +I DKVR I N W D + I GRG A+ +DGR++L+ QE +LR FI+ H+ G+QV+RRT E + RT ++ SNR+ GGLL RLGY+RRRGRIK P LNA+R+ARIR+F+VE + E++ + V +MD SF +QAH S YSYF +D+DGVVQDG GRT+GKGLRMIMV+AIT++G LA G I+EGWFK+ +G+ + DE TAE LWQA+ A GDYH AMTD MFM+WLEHRL PA + F K+MILVL+NAS+HHG+D EV VP+TN+KK+NVDLL F KSI RK E G VV NFEVP E SFP N + G+S+ EVA ATR +I HPERL ER+ FM K+G LI TPPYMPSFQPIELFWQHGKQYVS N+ R + EVW QIR GWYGD W GQ+GGWKA++C+ LV HA E+NKW+ DRD VL G +G+L P Y + +E+GVGE + E
Sbjct: 103 ESRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKK-DDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRT-------------------CNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKL-CDGLPIEEGWFKETG------SGKKEMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRK---EGEQG-----VVEYNFEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVPPVGDVEEGVGEQIQQE 627
BLAST of mRNA_H-paniculata_contig3061.8297.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE) HSP 1 Score: 491 bits (1263), Expect = 2.310e-165 Identity = 271/537 (50.47%), Postives = 356/537 (66.29%), Query Frame = 1
Query: 160 QTAAVLRISWDKVREIRNVWED-EKLRVTIGTGRGTVAEGGEDGRKKLSPEQEARLRAFISGIHEQGKQVWRRTAGEEIQRTQQHDMDKRIAREGQDDPPESPPDRMSNRAVGGLLYRLGYRRRRGRIKVPALNAQRMARIRQFIVEYDRVVKLEESEIHVRAFMDGSFCNQAHDSAYSYFGTDKDGVVQDGFGRTSGKGLRMIMVNAITRFGVLATTEFKGFGIKEGWFKDKTDKGTK-RNGRGS--VSDETTAEMLWQARRAMGDYHDAMTDKMFMDWLEHRLKPALKEMFPNKKMILVLENASFHHGYDPEVGVPKTNSKKYNVDLLPKFEGKSIAASRKIEWVNEGGKKVDKVVLQNFEVPAEGSFPNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERMEAFMSKEGRELIRTPPYMPSFQPIELFWQHGKQYVSFNYTSGRSILEVWEQIRLGWYGDPNWTGQKGGWKASNCANLVRHADEEINKWIADRDPVLKGNLGNLNLPVS-YKENV--DRVANGIEDGVGEHM 1749
Q A LRI D V +R +W D ++L T G GRG A +DGR+ ++ EQE LR FI G HE G+QV+RRT + ++ + +M SNRAVGGLL RLG++RRRGRIK+P LN +R RIR F+V+ D + E++ + V ++D SF +QAH SAYSYF +D GVVQDG GRT+GKGLRMIMV+AIT+ G LA + +GF I+EGWFK K ++ K + G +SDE TAE LWQA+ A GDYH+AMTD MFM WL+HRL PA F NKKM LVL+NAS+HH +D EV VP+TNSKKYNV+LL K+ S +R+ E K NFEVPA+GS PN N K G+SKEE+A+ TR + ++ P++L E+ E +M ++G LI TPPYMP+FQPIELFWQHGK YVS ++ GR+IL+VW+QIRLGWYGDP W GQ+GGWKA+NC LV+HA ++++WI L G +G+L PV+ Y+E D + +G+E+ E +
Sbjct: 6 QVATTLRIGTDNVLAVRTLWYDKQELYETNGKGRGK-ATSFDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEM--------------------SNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYIDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQ-EGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEG---------KAAEYNFEVPAQGSLPNANRK--NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNILDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQEATAEDEIEDGVEEQTDEWL 509
BLAST of mRNA_H-paniculata_contig3061.8297.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE) HSP 1 Score: 491 bits (1265), Expect = 8.320e-164 Identity = 285/559 (50.98%), Postives = 357/559 (63.86%), Query Frame = 1
Query: 103 LMLYFALVEDGNSMEDSV--KQTAAVLRISWDKVREIRNVWEDEK-LRVTIGTGRGTVAEGGEDGRKKLSPEQEARLRAFISGIHEQGKQVWRRTAGEEIQRTQQHDMDKRIAREGQDDPPESPPDRMSNRAVGGLLYRLGYRRRRGRIKVPALNAQRMARIRQFIVEYDRVVKLEESEIHVRAFMDGSFCNQAHDSAYSYFGTDKDGVVQDGFGRTSGKGLRMIMVNAITRFGVLATTEFKGFGIKEGWFKDKTDKGTKRNGRGSVSDETTAEMLWQARRAMGDYHDAMTDKMFMDWLEHRLKPALKEM--FPNKKMILVLENASFHHGYDPEVGVPKTNSKKYNVDLLPKFEGKSIAASRKIEWVNEGGKKVDKVVLQNFEVPAE--GSFPNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERMEAFMSKEGRELIRTPPYMPSFQPIELFWQHGKQYVSFNYTSGRSILEVWEQIRLGWYGDPNWTGQKGGWKASNCANLVRHADEEINKWIADRDPVLKGNLGNLNLPVSYKENVDRVANGIEDGVGEHMFLE 1758
L YF+ E + S+ Q A +I DKVR I N W D + L T GRG A+ +DGR++L+ QE +LR FI+ H+ G+QV+RRT E + RT ++ SNR+ GGLL RLGY+RRRGRIK P LNA+R+ARIR+F+V + + E++ + V +MD SF +QAH S YSYF +D+DGVVQDG GRT+GKGLRMIMV+AIT++G LA G I+EGWFK+ +G+ + DE TAE LWQA+ A GDYH AMTD MFM+WLEHRL PA + F K+MILVL+NAS+HHG+ EV VP+TN+KK+NVDLL F KSI RK E G VV NFEVP E SFP N + G+S+ EVA ATR +I HPERL ER+ FM K+G LI TPPYMPSFQPIELFWQHGKQYVS N+ R + EVW QIR GWYGD W GQ+GGWKA++C+ LV HA E+NKW+ DRD VL G +G+L P Y + +E+GVGE + E
Sbjct: 117 LQQYFSAPEQACMCDVSLCNVQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKK-DDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRT-------------------CNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLV-MNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKL-CDGLPIEEGWFKETG------SGKKEMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRK---EGEQG-----VVEYNFEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQE 637
BLAST of mRNA_H-paniculata_contig3061.8297.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 478 bits (1231), Expect = 4.340e-161 Identity = 269/502 (53.59%), Postives = 331/502 (65.94%), Query Frame = 1
Query: 160 QTAAVLRISWDKVREIRNVWEDEK-LRVTIGTGRGTVAEGGEDGRKKLSPEQEARLRAFISGIHEQGKQVWRRTAGEEIQRTQQHDMDKRIAREGQDDPPESPPDRMSNRAVGGLLYRLGYRRRRGRIKVPALNAQRMARIRQFIVEYDRVVKLEESEIHVRAFMDGSFCNQAHDSAYSYFGTDKDGVVQDGFGRTSGKGLRMIMVNAITRFGVLATTEFKGFGIKEGWFKDKTDKGTKRNGRGSVSDETTAEMLWQARRAMGDYHDAMTDKMFMDWLEHRLKPALKEM--FPNKKMILVLENASFHHGYDPEVGVPKTNSKKYNVDLLPKFEGKSIAASRKIEWVNEGGKKVDKVVLQNFEVPAE--GSFPNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERMEAFMSKEGRELIRTPPYMPSFQPIELFWQHGKQYVSFNYTSGRSILEVWEQIRLGWYGDPNWTGQKGGWKASNCANLVRHADEEINKWIADRDPV 1650
Q A +I DKVR I N W D + L T GRG A+ +DGR++L+ QE +LR FI+ H+ G+QV+RRT E + RT ++ SNR+ GGLL RLGY+RRRGRIK P LNA+R+ARIR+F+VE D + E++ + V +MD SF +QAH S YSYF +D+DGVVQDG GRT+GKGLRMIMV+AIT++G LA G I+EGWFK+ +G+ + DE TAE LWQA+ A GDYH AMTD MFM+WLEHRL PA + F K+MILVL+NAS+HHG+D EV VP++N+KK+NVDLL F KSI RK E G VV N EVP E SFP N + G+S+ EVA ATR +I HPERL ER+ FM K+G LI TPPYMPSFQPIELFWQHGKQYVS + R + EVW QIR GWYGD W GQ+GGWKA+NC+ LV HA E+NKW+ DRD V
Sbjct: 10 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKK-DDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRT-------------------CNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKL-CDGLPIEEGWFKETG------SGKKEMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRK---EGEQG-----VVEYNLEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVQIRKGWYGDKAWPGQEGGWKAANCSKLVDHAIGEMNKWVKDRDEV 474
BLAST of mRNA_H-paniculata_contig3061.8297.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE) HSP 1 Score: 466 bits (1199), Expect = 7.250e-156 Identity = 253/477 (53.04%), Postives = 324/477 (67.92%), Query Frame = 1
Query: 190 DKVREIRNVWED-EKLRVTIGTGRGTVAEGGEDGRKKLSPEQEARLRAFISGIHEQGKQVWRRTAGEEIQRTQQHDMDKRIAREGQDDPPESPPDRMSNRAVGGLLYRLGYRRRRGRIKVPALNAQRMARIRQFIVEYDRVVKLEESEIHVRAFMDGSFCNQAHDSAYSYFGTDKDGVVQDGFGRTSGKGLRMIMVNAITRFGVLATTEFKGFGIKEGWFKDKTDKGTK-RNGRGS--VSDETTAEMLWQARRAMGDYHDAMTDKMFMDWLEHRLKPALKEMFPNKKMILVLENASFHHGYDPEVGVPKTNSKKYNVDLLPKFEGKSIAASRKIEWVNEGGKKVDKVVLQNFEVPAEGSFPNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERMEAFMSKEGRELIRTPPYMPSFQPIELFWQHGKQYVSFNYTSGRSILEVWEQIRLGWYGDPNWTGQKGGWKASNCANLVRHA 1608
DKV +R +W D ++L T G GRG A +DGR+ ++ EQE LR FI G HE G+QV+RRT + ++ + +M SNRAVGGLL RLG++RRRGRIK+P LN +R RIR F+V+ D E++ + V +MD SF +QAH SAYSYF +D GVVQDG GRT+GKGLRMIMV+AIT+ G LA + +GF I+EGWFK K ++ K + G +SDE TAE LWQA+ A GDYH+AMTD MFM WL+HRL PA F NKKM LVL+NAS+HH +D EV VP+TNSKKYNV+LL K+ S +R+ E K NFEVPA+GS PN N K G+SKEE+A+ TR + ++ P++L E+ E +M ++G LI TPPYMP+FQPIELFWQHGK YVS ++ GR++L+VW+QIRLGWYGDP W GQ+GGWKA+NC LV+HA
Sbjct: 60 DKVLAVRTLWYDKQELYETNGKGRGK-ATSVDDGRRVITQEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEM--------------------SNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKGAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQ-EGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEG---------KAAEYNFEVPAQGSLPNANRK--NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHA 503
BLAST of mRNA_H-paniculata_contig3061.8297.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE) HSP 1 Score: 449 bits (1156), Expect = 5.790e-150 Identity = 258/494 (52.23%), Postives = 322/494 (65.18%), Query Frame = 1
Query: 100 VLMLYFALVEDGNSMEDSVKQTAAVLRISWDKVREIRNVWEDEK-LRVTIGTGRGTVAEGGEDGRKKLSPEQEARLRAFISGIHEQGKQVWRRTAGEEIQRTQQHDMDKRIAREGQDDPPESPPDRMSNRAVGGLLYRLGYRRRRGRIKVPALNAQRMARIRQFIVEYDRVVKLEESEIHVRAFMDGSFCNQAHDSAYSYFGTDKDGVVQDGFGRTSGKGLRMIMVNAITRFGVLATTEFKGFGIKEGWFKDKTDKGTKRNGRGSVSDETTAEMLWQARRAMGDYHDAMTDKMFMDWLEHRLKPALKEM--FPNKKMILVLENASFHHGYDPEVGVPKTNSKKYNVDLLPKFEGKSIAASRKIEWVNEGGKKVDKVVLQNFEVPAE--GSFPNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERMEAFMSKEGRELIRTPPYMPSFQPIELFWQHGKQYVSFNYTSGRSILEVWEQIRLGWYGDPNWTGQKG 1566
VLML F L ++G + ++V Q A +I DKVR I N W D + L T GRG A+ +DGR++L+ QE +LR FI+ H+ G+QV+RRT E + RT ++ SNR+ GLL RLGY+ RRGRIK P LNA+R+ARIR+F+VE D + E++ + V ++DGSF +QAH S YSYF D+D VVQDG GRT+GKGLR+IMV+AIT++G LA G I+EGWFK+ +G+ + DE TAE LWQA+ A GDYH AMTD MFM+WLEHRL PA + F K+MILVL+NAS+HHG+D EV VP+TN+KK+NVDLL F KSI RK E G VV +NFEVP E SFP N + G+S+ EVA ATR +I HPERL ER+ FM K+G LI TPPYMPSFQPIELFWQHGKQYVS N+ R + EVW QIR GWYGD W GQ+G
Sbjct: 2 VLMLLFDLRKEGRAENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKK-DDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRT-------------------CNMEQPSNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKL-CVGLPIEEGWFKETG------SGKREMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVKRK---EGEQG-----VVEENFEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGLALIWTPPYMPSFQPIELFWQHGKQYVSVNFELKRKVREVWVQIRKGWYGDKEWPGQEG 458
BLAST of mRNA_H-paniculata_contig3061.8297.1 vs. uniprot
Match: A0A6H5KL68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL68_9PHAE) HSP 1 Score: 439 bits (1129), Expect = 3.110e-145 Identity = 258/557 (46.32%), Postives = 346/557 (62.12%), Query Frame = 1
Query: 106 MLYFALVEDGNSMEDSVK--QTAAVLRISWDKVREIRNVWED-EKLRVTIGTGRGTVAEGGEDGRKKLSPEQEARLRAFISGIHEQGKQVWRRTAGEEIQRTQQHDMDKRIAREGQDDPPESPPDRMSNRAVGGLLYRLGYRRRRGRIKVPALNAQRMARIRQFIVEYDRVVKLEESEIHVRAFMDGSFCNQAHDSAYSYFGTDKDGVVQDGFGRTSGKGLRMIMVNAITRFGVLATTEFKGFGIKEGWFKDKTDKGTK-RNGRGS--VSDETTAEMLWQARRAMGDYHDAMTDKMFMDWLEHRLKPALKEMFPNKKMILVLENASFHHGYDPEVGVPKTNSKKYNVDLLPKFEGKSIAASRKIEWVNEGGKKVDKVVLQNFEVPAEGSFPNKNSKCGAGLSKEEVAAATRAFIQEKHPERLVERMEAFMSKEGRELIRTPPYMPSFQPIELFWQHGKQYVSFNYTSGRSILEVWEQIRLGWYGDPNWTGQKGGWKASNCANLVRHADEEINKWIADRDPVLKGNLGNLNLPVS-YKENV--DRVANGIEDGVGEHM 1749
M YF LV+ G S E+ K Q L + + ++W D ++L T G GRG A +DGR+ ++ EQE +R FI G HE G+QV+RRT + ++ + +M SNRAVGGLL RLG++RRRGRIK+P LN +R RIR F+V+ D +A D+ YSYF +D GVVQDG GRT+GKG+RM+MV+AIT+ G LA + GF I+EGWFK K ++ K + G +SDE TAE LWQA+ A G Y++AMTD MFM WL+HRL PA F NKKM LVL+NAS+HH +D EV VP+TNSKKYNV+LL K+ S +R+ E K NFEVPA+GS PN N K G+SKEE+A+ TR + ++ P++L E+ E +M ++G LI TPPYMP+FQPIELFWQ GK YVS ++ GR+IL+VW+QIRLGWYGD W GQ+GGWKA++C LV+HA ++++WI L G +G+L PV+ Y+E D + +G+E+ E +
Sbjct: 1 MFYFDLVK-GGSFENHAKEQQCREDLEDRYGQGPGGAHIWYDKQELYETNGKGRGK-ATSVDDGRRVITKEQEDGIREFIKGEHEAGRQVFRRTVKDYLECSFGLEM--------------------SNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMD-------------------LAKRAEDAGYSYFPSDDTGVVQDGIGRTTGKGVRMVMVHAITKHGPLAELQ-GGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGYYNNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEG---------KAAEYNFEVPAQGSLPNANRK--NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQQGKHYVSIHFERGRNILDVWKQIRLGWYGDSEWDGQEGGWKAASCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQEATAEDEIEDGVEEQTDEWL 504 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3061.8297.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3061.8297.1 >prot_H-paniculata_contig3061.8297.1 ID=prot_H-paniculata_contig3061.8297.1|Name=mRNA_H-paniculata_contig3061.8297.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=606bp PKETTQEQTFAQEQREILKPKQGALNSACQSRGVLMLYFALVEDGNSMEDback to top mRNA from alignment at H-paniculata_contig3061:15984..17873+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3061.8297.1 ID=mRNA_H-paniculata_contig3061.8297.1|Name=mRNA_H-paniculata_contig3061.8297.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1890bp|location=Sequence derived from alignment at H-paniculata_contig3061:15984..17873+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3061:15984..17873+ >mRNA_H-paniculata_contig3061.8297.1 ID=mRNA_H-paniculata_contig3061.8297.1|Name=mRNA_H-paniculata_contig3061.8297.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3636bp|location=Sequence derived from alignment at H-paniculata_contig3061:15984..17873+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |