mRNA_H-paniculata_contig3059.8288.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3059.8288.1
Unique NamemRNA_H-paniculata_contig3059.8288.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3059.8288.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 2.990e-112
Identity = 185/284 (65.14%), Postives = 213/284 (75.00%), Query Frame = 1
Query:  670 RRAAKGHDARAVLAKPQVAELRAFISAEHKKGKQVFRRTVGKWIQAKCRHPMSNRVVGGLLYRLGYSRRLGRIKVSPLNGARKTRIR*FLVEFYGALTEEAAETAAITYMDESFSHQLHGSAYSYFFTGEHGVLQDGMGRTLGKGQRLIMVHAITKQDPLAACDDAGLPVQKGWFKPEESGKGRQERGPMGEEDIAEMLWQAKITSGDCHHGMTDKMFMEWLEKRLASAFKDALGNNEMILVLDNGSYHHGYDPEVGVPETNTKKHNTELLRKYKAGRITVQRE 1521
            R  + G D R +L   Q A LRAFIS +H+ G+QVFRRTV +WI+  C   +SNR VGGLLYR+GY RR GRIK+ PLN  RK RIR FLVE   ALT+E  E A I YMDESF HQLHGSAYSYF T + GV+QDGMGRT GKG R+IMVHAITK   LAA D+   P+ +GWFKP++ GKGRQ  G MG E+ AEMLWQAK  +GD H  MTDKMFMEWLE+RLA AFK   GN +MILVLDN SYHHGYD EVGVPE+N+K +NT LLRKYK  +ITV+RE
Sbjct:  160 RGVSSGKDGRKLLDDVQCANLRAFISDKHENGQQVFRRTVREWIKETCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDDGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDENNFPIPEGWFKPKDKGKGRQGAGSMGTEETAEMLWQAKRATGDYHDAMTDKMFMEWLERRLAPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVERE 443          
BLAST of mRNA_H-paniculata_contig3059.8288.1 vs. uniprot
Match: A0A6H5KZM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM0_9PHAE)

HSP 1 Score: 308 bits (789), Expect = 5.170e-93
Identity = 156/247 (63.16%), Postives = 181/247 (73.28%), Query Frame = 1
Query:  670 RRAAKGHDARAVLAKPQVAELRAFISAEHKKGKQVFRRTVGKWIQAKCRHPMSNRVVGGLLYRLGYSRRLGRIKVSPLNGARKTRIR*FLVEFYGALTEEAAETAAITYMDESFSHQLHGSAYSYFFTGEHGVLQDGMGRTLGKGQRLIMVHAITKQDPLAACDDAGLPVQKGWFKPEESGKGRQERGPMGEEDIAEMLWQAKITSGDCHHGMTDKMFMEWLEKRLASAFKDALGNNEMILVLDNGS 1410
            R  + G D R +L   Q A LRAFIS +H+ G+QVFRRTV +WI+ +C   +SNR VGGLLYR+GY RR GRIK+ PLN  RK RIR FLVE   ALT+E  E A I YMDESF HQLHGSAYSYF T ++GV+QDGMGRT GKG R+IMVHAITK   LAA D+   P+ +GWFKP++ GKGRQ  G MG E+ AEMLWQAK  +GD H  M DKMFMEWLE+RLA AFK   GN +MI VLDN S
Sbjct:  160 RGVSSGKDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRRGGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDENNFPIPEGWFKPKDKGKGRQGAGSMGTEETAEMLWQAKRATGDYHDAMKDKMFMEWLERRLAPAFKAKYGNKKMIFVLDNAS 406          
BLAST of mRNA_H-paniculata_contig3059.8288.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 8.300e-87
Identity = 173/328 (52.74%), Postives = 208/328 (63.41%), Query Frame = 1
Query:  673 RAAKGHDARAVLAKPQVAELRAFISAEHKKGKQVFRRTVGKWIQAKCRHPM-SNRVVGGLLYRLGYSRRLGRIKVSPLNGARKTRIR*FLVEFYGALTEEAAETAAITYMDESFSHQLHGSAYSYFFTGEHGVLQDGMGRTLGKGQRLIMVHAITKQDPLAACDDAGLPVQKGWFKPEESGKGRQERGPMGEEDIAEMLWQAKITSGDCHHGMTDKMFMEWLEKRLASAFK--DALGNNEMILVLDNGSYHHGYDPEVGVPETNTKKHNTELLRKYKAGRITVQREERDGKGGKKVVVHNSPSRT-PGVAVVLAVRRYSIGHSSLLSA 1644
            + AK  D R  L + Q  +LR FI+ EHK G+QVFRRTV +W+   C     SNR  GGLL RLGY RR GRIK  PLN  R  RIR FLVE   A   E A  A I YMDESF HQ HGS YSYF + E GV+QDG+GRT GKG R+IMVHAITK  PLA   D GLP+++GWFK  E+G G++E   M +E+ AE LWQAK+  GD H  MTD MFMEWLE RL+ A+          MILVLDN SYHHG+D EV VPE+NTKKHN +LLR + A  I V+R+E    G + VV +N    T PG +     R   +  + + +A
Sbjct:   45 KTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCD-GLPIEEGWFK--ETGSGKKE---MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKE----GEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATA 362          
BLAST of mRNA_H-paniculata_contig3059.8288.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 3.310e-86
Identity = 170/299 (56.86%), Postives = 197/299 (65.89%), Query Frame = 1
Query:  679 AKGHDARAVLAKPQVAELRAFISAEHKKGKQVFRRTVGKWIQAKCRHPM-SNRVVGGLLYRLGYSRRLGRIKVSPLNGARKTRIR*FLVEFYGALTEEAAETAAITYMDESFSHQLHGSAYSYFFTGEHGVLQDGMGRTLGKGQRLIMVHAITKQDPLAA-CDDAGLPVQKGWFKPEESGKGRQERGPMGEEDIAEMLWQAKITSGDCHHGMTDKMFMEWLEKRLASAFK--DALGNNEMILVLDNGSYHHGYDPEVGVPETNTKKHNTELLRKYKAGRITVQREERDGKGGKKVVVHN 1563
            AK  D R  L + Q  +LR FI+ EHK G+QVFRRTV +W+   C     SNR VGGLL RLGY RR GRIK  PLN  R  RIR FLVE   A   E A  A I YMDESF HQ HGS YSYF + E+GV+QDG+GRT GKG R+IMVHAITK  PLA  CD  G P+++GWFK   SGK + E     +E+ AE LWQAK+  GD H  MTD MFMEWLE RL+ A+         +MILVLDN SYHHG+D EV VPETNTKKHN +LLRK+ A  I V+R+E    G +  V HN
Sbjct:  198 AKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNMEQPSNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKFCD--GFPIEEGWFKETGSGKKKME-----DEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKE----GEQGFVEHN 485          
BLAST of mRNA_H-paniculata_contig3059.8288.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 7.640e-86
Identity = 174/328 (53.05%), Postives = 208/328 (63.41%), Query Frame = 1
Query:  673 RAAKGHDARAVLAKPQVAELRAFISAEHKKGKQVFRRTVGKWIQAKCRHPM-SNRVVGGLLYRLGYSRRLGRIKVSPLNGARKTRIR*FLVEFYGALTEEAAETAAITYMDESFSHQLHGSAYSYFFTGEHGVLQDGMGRTLGKGQRLIMVHAITKQDPLAACDDAGLPVQKGWFKPEESGKGRQERGPMGEEDIAEMLWQAKITSGDCHHGMTDKMFMEWLEKRLASAFK--DALGNNEMILVLDNGSYHHGYDPEVGVPETNTKKHNTELLRKYKAGRITVQREERDGKGGKKVVVHNSPSRT-PGVAVVLAVRRYSIGHSSLLSA 1644
            + AK  D R  L + Q  +LR FI+ EHK G+QVFRRTV +W+   C     SNR  GGLL RLGY RR GRIK  PLN  R  RIR FLVE   A   E A  A I YMDESF HQ HGS YSYF + E GV+QDG+GRT GKG R+IMVHAITK  PLA   D GLP+++GWFK  E+G G++E   M +E+ AE LWQAK+  GD H  MTD MFMEWLE RL+ A+          MILVLDN SYHHG+D EV VPETNTKKHN +LLR + A  I V+R+E    G + VV +N    T PG +     R   +  + + +A
Sbjct:  162 KTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCD-GLPIEEGWFK--ETGSGKKE---MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKE----GEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATA 479          
BLAST of mRNA_H-paniculata_contig3059.8288.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 6.950e-83
Identity = 154/281 (54.80%), Postives = 187/281 (66.55%), Query Frame = 1
Query:  691 DARAVLAKPQVAELRAFISAEHKKGKQVFRRTVGKWIQAKCRHPMSNRVVGGLLYRLGYSRRLGRIKVSPLNGARKTRIR*FLVEFYGALTEEAAETAAITYMDESFSHQLHGSAYSYFFTGEHGVLQDGMGRTLGKGQRLIMVHAITKQDPLAACDDAGLPVQKGWFKPEESGKGRQERGP----MGEEDIAEMLWQAKITSGDCHHGMTDKMFMEWLEKRLASAFKDALGNNEMILVLDNGSYHHGYDPEVGVPETNTKKHNTELLRKYKAGRITVQRE 1521
            D R V+ K Q   LR FI  EH+ G+QVFRRTV  +++      MSNR VGGLL RLG+ RR GRIK+ PLN  RK RIR FLV+   A   E A  A I Y+DESF HQ HGSAYSYF + + GV+QDG+GRT GKG R+IMVHAITK  PLA   + G P+++GWFK +E+   + + G     M +E  AE LWQAK+ +GD H+ MTD MFM+WL+ RL  AF     N +M LVLDN SYHH +D EV VPETN+KK+N ELLRKY      V RE
Sbjct:   47 DGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYIDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQE-GFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRE 326          
BLAST of mRNA_H-paniculata_contig3059.8288.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 7.170e-83
Identity = 154/281 (54.80%), Postives = 187/281 (66.55%), Query Frame = 1
Query:  691 DARAVLAKPQVAELRAFISAEHKKGKQVFRRTVGKWIQAKCRHPMSNRVVGGLLYRLGYSRRLGRIKVSPLNGARKTRIR*FLVEFYGALTEEAAETAAITYMDESFSHQLHGSAYSYFFTGEHGVLQDGMGRTLGKGQRLIMVHAITKQDPLAACDDAGLPVQKGWFKPEESGKGRQERGP----MGEEDIAEMLWQAKITSGDCHHGMTDKMFMEWLEKRLASAFKDALGNNEMILVLDNGSYHHGYDPEVGVPETNTKKHNTELLRKYKAGRITVQRE 1521
            D R V+ + Q   LR FI  EH+ G+QVFRRTV  +++      MSNR VGGLL RLG+ RR GRIK+ PLN  RK RIR FLV+   A   E A  A I YMDESF HQ HGSAYSYF + + GV+QDG+GRT GKG R+IMVHAITK  PLA   + G P+++GWFK +E+   + + G     M +E  AE LWQAK+ +GD H+ MTD MFM+WL+ RL  AF     N +M LVLDN SYHH +D EV VPETN+KK+N ELLRKY      V RE
Sbjct:   91 DGRRVITQEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKGAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQE-GFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRE 370          
BLAST of mRNA_H-paniculata_contig3059.8288.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 3.650e-82
Identity = 171/328 (52.13%), Postives = 206/328 (62.80%), Query Frame = 1
Query:  673 RAAKGHDARAVLAKPQVAELRAFISAEHKKGKQVFRRTVGKWIQAKCRHPM-SNRVVGGLLYRLGYSRRLGRIKVSPLNGARKTRIR*FLVEFYGALTEEAAETAAITYMDESFSHQLHGSAYSYFFTGEHGVLQDGMGRTLGKGQRLIMVHAITKQDPLAACDDAGLPVQKGWFKPEESGKGRQERGPMGEEDIAEMLWQAKITSGDCHHGMTDKMFMEWLEKRLASAFK--DALGNNEMILVLDNGSYHHGYDPEVGVPETNTKKHNTELLRKYKAGRITVQREERDGKGGKKVVVHNSPSRT-PGVAVVLAVRRYSIGHSSLLSA 1644
            + AK  D R  L + Q  +LR FI+ EHK G+QVFRRTV +W+   C     SNR  GGLL RLGY RR GRIK  PLN  R  RIR FLV       E+A   A I YMDESF HQ HGS YSYF + E GV+QDG+GRT GKG R+IMVHAITK  PLA   D GLP+++GWFK  E+G G++E   M +E+ AE LWQAK+  GD H  MTD MFMEWLE RL+ A+          MILVLDN SYHHG+  EV VPETNTKKHN +LLR + A  I V+R+E    G + VV +N    T PG +     R   +  + + +A
Sbjct:  173 KTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVMNMAKRAEDAG-LAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCD-GLPIEEGWFK--ETGSGKKE---MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKE----GEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATA 489          
BLAST of mRNA_H-paniculata_contig3059.8288.1 vs. uniprot
Match: A0A6H5KAU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU4_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 1.060e-81
Identity = 159/287 (55.40%), Postives = 187/287 (65.16%), Query Frame = 1
Query:  673 RAAKGHDARAVLAKPQVAELRAFISAEHKKGKQVFRRTVGKWIQAKCRHPM-SNRVVGGLLYRLGYSRRLGRIKVSPLNGARKTRIR*FLVEFYGALTEEAAETAAITYMDESFSHQLHGSAYSYFFTGEHGVLQDGMGRTLGKGQRLIMVHAITKQDPLAACDDAGLPVQKGWFKPEESGKGRQERGPMGEEDIAEMLWQAKITSGDCHHGMTDKMFMEWLEKRLASAFK--DALGNNEMILVLDNGSYHHGYDPEVGVPETNTKKHNTELLRKYKAGRITVQREE 1524
            + AK  D R  L + Q  +LR FI+ EHK G+QVFRRTV +W+   C     SNR  GGLL RLGY RR GRIK  PLN  R  RIR FLVE   A   E A  A I YMDESF HQ HGS  SYF + E GV+QDG+GRT GKG R+IMVHAITK  PLA     G P+++GWFK  E+G G++E   M +E+ AE LWQ K+  GD H  MTD MFMEWLE RL  A+          MILVLDN SYHH +D EV VPE+NTKKHN +LLR + A  I+V+R+E
Sbjct:  135 KTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPCSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLC-YGFPIEEGWFK--ETGSGKKE---MEDEETAEFLWQVKLAKGDNHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHEFDAEVKVPESNTKKHNVDLLRMFGAKSISVKRKE 415          
BLAST of mRNA_H-paniculata_contig3059.8288.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 2.120e-81
Identity = 153/281 (54.45%), Postives = 187/281 (66.55%), Query Frame = 1
Query:  691 DARAVLAKPQVAELRAFISAEHKKGKQVFRRTVGKWIQAKCRHPMSNRVVGGLLYRLGYSRRLGRIKVSPLNGARKTRIR*FLVEFYGALTEEAAETAAITYMDESFSHQLHGSAYSYFFTGEHGVLQDGMGRTLGKGQRLIMVHAITKQDPLAACDDAGLPVQKGWFKPEESGKGRQERGP----MGEEDIAEMLWQAKITSGDCHHGMTDKMFMEWLEKRLASAFKDALGNNEMILVLDNGSYHHGYDPEVGVPETNTKKHNTELLRKYKAGRITVQRE 1521
            D R V+ K Q   LR FI  EH+ G+QVFRRTV  +++      MSNR VGGLL RLG+ RR GRIK+ PLN  RK RIR FLV+   A   E A  A I YMDESF HQ HGSAYSYF + + G++QDG+GRT GKG R+IMVHAIT+  PLA   + G P+++GWFK +E+   + + G     M +E  AE LWQAK+ +GD H+ MTD MFM+WL+ RL  AF     N +M LVLDN SYHH +D EV VPETN+KK+N ELLRKY      V RE
Sbjct:  168 DGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQE-GFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRE 447          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3059.8288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ25_ECTSI2.990e-11265.14Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6H5KZM0_9PHAE5.170e-9363.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX7_9PHAE8.300e-8752.74DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LNM6_ECTSI3.310e-8656.86DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KIM5_9PHAE7.640e-8653.05DDE_3 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A6H5KCN2_9PHAE6.950e-8354.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP14_9PHAE7.170e-8354.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR41_9PHAE3.650e-8252.13DDE_3 domain-containing protein n=5 Tax=Ectocarpus... [more]
A0A6H5KAU4_9PHAE1.060e-8155.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX2_9PHAE2.120e-8154.45Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3059contigH-paniculata_contig3059:14550..17744 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size2626
Cds size825
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3059.8288.1prot_H-paniculata_contig3059.8288.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3059 15355..16179 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929940.0183218-UTR-H-paniculata_contig3059:14549..153541622929940.0183218-UTR-H-paniculata_contig3059:14549..15354Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3059 14550..15354 -
1691481078.7040186-UTR-H-paniculata_contig3059:14549..153541691481078.7040186-UTR-H-paniculata_contig3059:14549..15354Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3059 14550..15354 -
1622929940.0641596-UTR-H-paniculata_contig3059:16179..165561622929940.0641596-UTR-H-paniculata_contig3059:16179..16556Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3059 16180..16556 -
1691481078.7253308-UTR-H-paniculata_contig3059:16179..165561691481078.7253308-UTR-H-paniculata_contig3059:16179..16556Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3059 16180..16556 -
1622929940.0821013-UTR-H-paniculata_contig3059:17125..177441622929940.0821013-UTR-H-paniculata_contig3059:17125..17744Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3059 17126..17744 -
1691481078.7328315-UTR-H-paniculata_contig3059:17125..177441691481078.7328315-UTR-H-paniculata_contig3059:17125..17744Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3059 17126..17744 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929940.0380232-CDS-H-paniculata_contig3059:15354..161791622929940.0380232-CDS-H-paniculata_contig3059:15354..16179Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3059 15355..16179 -
1691481078.7159426-CDS-H-paniculata_contig3059:15354..161791691481078.7159426-CDS-H-paniculata_contig3059:15354..16179Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3059 15355..16179 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3059.8288.1

>prot_H-paniculata_contig3059.8288.1 ID=prot_H-paniculata_contig3059.8288.1|Name=mRNA_H-paniculata_contig3059.8288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp
MDESFSHQLHGSAYSYFFTGEHGVLQDGMGRTLGKGQRLIMVHAITKQDP
LAACDDAGLPVQKGWFKPEESGKGRQERGPMGEEDIAEMLWQAKITSGDC
HHGMTDKMFMEWLEKRLASAFKDALGNNEMILVLDNGSYHHGYDPEVGVP
ETNTKKHNTELLRKYKAGRITVQREERDGKGGKKVVVHNSPSRTPGVAVV
LAVRRYSIGHSSLLSAQISPTNLRRKLSVHGEARVAADLDPPLKCHLFSR
SSCFGKIVSNMPASTTVRSMGAVP*
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mRNA from alignment at H-paniculata_contig3059:14550..17744-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3059.8288.1 ID=mRNA_H-paniculata_contig3059.8288.1|Name=mRNA_H-paniculata_contig3059.8288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3195bp|location=Sequence derived from alignment at H-paniculata_contig3059:14550..17744- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCAGCACCCCGACTTTTGGGCCTGTGCAACCGTATCACGGCTCCAGGTA CGATGAAAAGGAGCAAGGGCCGCTATACCGAAGCTGATCCGCGATGCGCG CTGAAGCGTAGAAGGAACGCCGCTGGCAAGCTTGATACTGCCAACTTTGT CAAGATGATCAACGCGAGAGACGCAGTACTTGATATGAGGAAGGCGGCAT GCGACGCTCGGGACGCGGCCCAGGATGCTCCAGACGACATCCAGGCCAGC GAGGAGGCAAAGCTTGCCAAGGCTCGGACAGAGCTTGCCGAAGACCATGC AACACGTGCCAGAAAAATGGCACAGTGCGGCGATATGATAGCTGAGCGTG GCGCAGCCATCGAACGGGGGGAGAAGGCTCAGATGGAACGGGGCAAACAA ATGGAGATGGACAATTTCACAGCAGCGCAGCAGCACCAGCAGGACATTGC TCAGGCGGCGCGCGAGGAGTTAGCTCACCAGCAAGGAGCATTGTTCGAGA TATCATAGTCCCGGCCCATCCTACTGATTTACTTCGATCTCGCCCAGTCA GGCATGGATCCAAATCCGGCTGTCTAGGAGACCGCGAGAGTAGTGCGGGT CGGCAGGAAGGTGTATCAGGTATGCATCTTCGTTTTGTACAGACACTATA GACTGTTCTTTGAATACACCCTTTCGAACAGTTTTTTACATACTTTATCC CAGTGTTGTGGTACTGTAAAAGCAGTACGATATCGCCTCTCCCTGCGTGT GTTCTTAATCACGACGTTACTGTTTGTACCTTGTTTTGGCTGATAATAAA TAAATCATTAATGATGCGTCCACGGTAAGCTGTCTGTACCTCTGCTTTCT GAACCGTTTCGCCTCGTCTGTCATGCAAAGTGTTGGCTCATTTGCACTCT CTGTAGACTGAGAGTACTTACTGCCTGTTGGTGCCGAGCCGTTTGTATCC TTGAGTTTGGGCGCCCGCTGTACCTGGATTGTGCTGAAGTCGTCGTACCC TCTTCGAGTGAGAGTGCTCGTTGTATGTACTGACCGTTTTTCCAAAGTGC TGACGCTTGTGTACAACAAAGTTTGTGCAACCTCTCCTCAAATATCGTAA ATGGCTGCGACGTCAACTCTGATTGTGATATTCACGACTGCATTTTCGTG TTACGCGGTGACACGTCCGCACTTGTTGGGAGGATCAGAAGTTGCTCATG ATAACATCAGGCGAAGGATGAGACGTGACGAAAGGACAAGACGCGCGGCG AAAGGACACGACGCGCGGGCGGTCCTCGCCAAGCCGCAAGTAGCCGAGCT TCGCGCCTTCATCAGCGCTGAACATAAGAAGGGGAAACAAGTTTTCCGGC GGACGGTGGGCAAATGGATCCAGGCCAAATGTCGTCATCCAATGTCGAAC CGTGTTGTAGGAGGACTGTTGTATAGGCTTGGCTATAGCCGCCGCCTTGG ACGGATCAAAGTCTCCCCTCTCAATGGGGCGAGGAAAACGCGTATTCGAT GATTTCTCGTAGAGTTTTATGGTGCTCTTACTGAAGAAGCGGCAGAAACG GCAGCTATAACGTACATGGATGAGAGTTTCAGCCATCAGTTGCACGGTTC TGCGTACTCGTACTTTTTCACCGGTGAGCATGGGGTATTGCAGGACGGGA TGGGTCGTACCTTGGGCAAGGGTCAGCGATTAATCATGGTTCACGCAATC ACTAAGCAAGACCCATTGGCAGCTTGTGATGATGCCGGACTTCCTGTCCA GAAGGGGTGGTTCAAGCCTGAGGAATCGGGCAAGGGTAGGCAAGAGAGGG GGCCGATGGGTGAAGAGGATATCGCAGAGATGCTTTGGCAGGCCAAAATT ACCTCAGGGGATTGCCACCATGGGATGACCGATAAAATGTTCATGGAATG GCTCGAAAAACGTCTGGCGTCGGCTTTCAAAGATGCTTTAGGAAACAACG AGATGATTCTTGTTCTTGATAACGGGTCGTACCACCACGGATATGACCCG GAGGTCGGGGTGCCTGAGACCAACACTAAGAAGCACAACACGGAACTTTT GCGCAAATACAAGGCTGGAAGAATCACTGTTCAACGTGAAGAACGCGACG GTAAGGGTGGAAAGAAGGTTGTGGTGCACAATTCACCAAGTCGAACTCCT GGTGTGGCGGTGGTGTTAGCAGTGCGGAGGTATAGCATTGGCCACTCGAG CTTACTTTCAGCTCAGATTTCCCCCACAAACCTACGGAGGAAGTTAAGTG TTCATGGAGAAGCGAGGGTGGCAGCTGATCTGGACCCCCCCTTGAAATGC CATCTTTTCAGCCGATCGAGCTGTTTTGGCAAGATAGTAAGCAATATGCC AGCTTCAACTACGGTACGAAGTATGGGAGCAGTACCATAAACAAGTGCGG GAGCAGGTTGGGAAGGTCTGATATGCTTATGAGAGAGGGAACGGCAAGAC GGGGGTGGAAAGCGGCAGACTCTCGCAAACTTGTTGCGCACGCCATTGAA GGGATGAATGAGTGGGTATGTACCGACGACGTACTGGCTGGTACCGTGGA AGTCCCCCTCGTACCGGACGATTACGATTACAGTGCTCCCGGGTTCAAGG CTGCAGTGGAGGATGACGGGGGGAGCTTCAGGATGCACATGATGATTCTG ATGAATGCGGAGTTGATGGATGTGAGGGAGGAGTCGGAAGACGGGAATAA ATTGGTGTAAGTGAAAAACTTAGGGTCTTGGATATGAGATGTTGGCACAA TGATGACAGCTGCCCAACGAATAGGCAATGTGGCCTTTTTTCATTGAACC TTCTTTCTCACCCCCTTCCTCAAACCTCCAAGTCCACCCAGGCTTTGTCT GAGGAACTTGTTGTGTGGCACAAAGACGGACTAACGTTAGCGGGGAACCT CATGGAAACTACGGTCGCAATTAACAACCACATTTGTACGTTTCTGTTTT GTTTTTTGTTGGAACCGCATCGGCTGTTTGTTTATTTTCGCCATCGTTGA CGGAATAGATCGAAAAATACCCAACTTTTTCTCCCCCCACGTCGATTTAC GGAAAAAGCGGCGACAATGCTGGAAAATACGGCCAAACGTGACCGCAAAA ACTATTTTTCCATCGCACGGTTTCGCATGTGATCATATCCTCCGTGTGGT TTATTGGAGTCATCGTTTCTGGGAAACCATCAAGTATTGAGCGGT
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Coding sequence (CDS) from alignment at H-paniculata_contig3059:14550..17744-

>mRNA_H-paniculata_contig3059.8288.1 ID=mRNA_H-paniculata_contig3059.8288.1|Name=mRNA_H-paniculata_contig3059.8288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig3059:14550..17744- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATGAGAGTTTCAGCCATCAGTTGCACGGTTCTGCGTACTCGTACTT
TTTCACCGGTGAGCATGGGGTATTGCAGGACGGGATGGGTCGTACCTTGG
GCAAGGGTCAGCGATTAATCATGGTTCACGCAATCACTAAGCAAGACCCA
TTGGCAGCTTGTGATGATGCCGGACTTCCTGTCCAGAAGGGGTGGTTCAA
GCCTGAGGAATCGGGCAAGGGTAGGCAAGAGAGGGGGCCGATGGGTGAAG
AGGATATCGCAGAGATGCTTTGGCAGGCCAAAATTACCTCAGGGGATTGC
CACCATGGGATGACCGATAAAATGTTCATGGAATGGCTCGAAAAACGTCT
GGCGTCGGCTTTCAAAGATGCTTTAGGAAACAACGAGATGATTCTTGTTC
TTGATAACGGGTCGTACCACCACGGATATGACCCGGAGGTCGGGGTGCCT
GAGACCAACACTAAGAAGCACAACACGGAACTTTTGCGCAAATACAAGGC
TGGAAGAATCACTGTTCAACGTGAAGAACGCGACGGTAAGGGTGGAAAGA
AGGTTGTGGTGCACAATTCACCAAGTCGAACTCCTGGTGTGGCGGTGGTG
TTAGCAGTGCGGAGGTATAGCATTGGCCACTCGAGCTTACTTTCAGCTCA
GATTTCCCCCACAAACCTACGGAGGAAGTTAAGTGTTCATGGAGAAGCGA
GGGTGGCAGCTGATCTGGACCCCCCCTTGAAATGCCATCTTTTCAGCCGA
TCGAGCTGTTTTGGCAAGATAGTAAGCAATATGCCAGCTTCAACTACGGT
ACGAAGTATGGGAGCAGTACCATAAATGGATGAGAGTTTCAGCCATCAGT
TGCACGGTTCTGCGTACTCGTACTTTTTCACCGGTGAGCATGGGGTATTG
CAGGACGGGATGGGTCGTACCTTGGGCAAGGGTCAGCGATTAATCATGGT
TCACGCAATCACTAAGCAAGACCCATTGGCAGCTTGTGATGATGCCGGAC
TTCCTGTCCAGAAGGGGTGGTTCAAGCCTGAGGAATCGGGCAAGGGTAGG
CAAGAGAGGGGGCCGATGGGTGAAGAGGATATCGCAGAGATGCTTTGGCA
GGCCAAAATTACCTCAGGGGATTGCCACCATGGGATGACCGATAAAATGT
TCATGGAATGGCTCGAAAAACGTCTGGCGTCGGCTTTCAAAGATGCTTTA
GGAAACAACGAGATGATTCTTGTTCTTGATAACGGGTCGTACCACCACGG
ATATGACCCGGAGGTCGGGGTGCCTGAGACCAACACTAAGAAGCACAACA
CGGAACTTTTGCGCAAATACAAGGCTGGAAGAATCACTGTTCAACGTGAA
GAACGCGACGGTAAGGGTGGAAAGAAGGTTGTGGTGCACAATTCACCAAG
TCGAACTCCTGGTGTGGCGGTGGTGTTAGCAGTGCGGAGGTATAGCATTG
GCCACTCGAGCTTACTTTCAGCTCAGATTTCCCCCACAAACCTACGGAGG
AAGTTAAGTGTTCATGGAGAAGCGAGGGTGGCAGCTGATCTGGACCCCCC
CTTGAAATGCCATCTTTTCAGCCGATCGAGCTGTTTTGGCAAGATAGTAA
GCAATATGCCAGCTTCAACTACGGTACGAAGTATGGGAGCAGTACCATAA
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