prot_H-paniculata_contig30579.8282.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30579.8282.1
Unique Nameprot_H-paniculata_contig30579.8282.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
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BLAST of mRNA_H-paniculata_contig30579.8282.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 1.490e-12
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 0 
Query:    2 STDARLNKLFQSVKDNLHPRGTAAIMVPHPWHLQAGRMYSALTHASVGLHVEDHPLLLQYKGMRAGRTSRNVVNHL 77
            +T+  L ++  +V+  +HP GT A++VPHPW     R+  A+  A VGL VEDHPL+L Y     GR      NHL
Sbjct:  372 ATNTHLRRVIDNVRGRMHPDGTIALVVPHPWSAHFHRLQEAVRDACVGLVVEDHPLMLNYSKRVGGRPPIRAENHL 447
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30579.8282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBJ9_9PHAE1.490e-1242.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30579contigH-paniculata_contig30579:543..1116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30579.8282.1mRNA_H-paniculata_contig30579.8282.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30579 543..1116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30579.8282.1 ID=prot_H-paniculata_contig30579.8282.1|Name=mRNA_H-paniculata_contig30579.8282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
TSTDARLNKLFQSVKDNLHPRGTAAIMVPHPWHLQAGRMYSALTHASVGL
HVEDHPLLLQYKGMRAGRTSRNVVNHL
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