prot_H-paniculata_contig30569.8281.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig30569.8281.1
Unique Name	prot_H-paniculata_contig30569.8281.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	91

Homology

[Close]

BLAST of mRNA_H-paniculata_contig30569.8281.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 8.150e-22
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0

Query:    1 LIALDCTNAFNSVKRAAILEEVAFRTPGLIPFVAKCYGEKPADIIFHIDTGERRIISSNTGIHQGDGLGPALFCMPVGPILHKCREHFEAL 91
            ++  DC+NAFN+ KR AI+ + A   P L+ ++A+CY E PA  I+ +D+GERR I   +G+ QGDG+GP LFC  + PI+ K R  ++ L
Sbjct:  139 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHL 229

[Close]

BLAST of mRNA_H-paniculata_contig30569.8281.1 vs. uniprot
Match: A0A6H5K242_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K242_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.650e-21
Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 0

Query:    1 LIALDCTNAFNSVKRAAILEEVAFRTPGLIPFVAKCYGEKPADIIFHIDTGERRIISSNTGIHQGDGLGPALFCMPVGPILHKCREHFEAL 91
            ++  DC+NAFN+ KR AI+ + A     L+ ++A+CY E PA  I+ +D+GERR I   +G+ QGDG+GP LFC  + PI+ + R  ++ L
Sbjct:   13 VVQTDCSNAFNTGKRTAIMAQAAKSVLDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLRLRAKYDHL 103

[Close]

BLAST of mRNA_H-paniculata_contig30569.8281.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 5.650e-21
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0

Query:    1 LIALDCTNAFNSVKRAAILEEVAFRTPGLIPFVAKCYGEKPADIIFHIDTGERRIISSNTGIHQGDGLGPALFCMPVGPILHKCREHFEAL 91
            ++  DC+NAFN+ KR AI+ + A   P L+ ++A+CY E PA  I+ +D+GERR I   +G+ QGDG+GP LFC  + PI+ K R  ++ L
Sbjct:  138 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNL 228

[Close]

BLAST of mRNA_H-paniculata_contig30569.8281.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 5.750e-21
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0

Query:    1 LIALDCTNAFNSVKRAAILEEVAFRTPGLIPFVAKCYGEKPADIIFHIDTGERRIISSNTGIHQGDGLGPALFCMPVGPILHKCREHFEAL 91
            ++  DC+NAFN+ KR AI+ + A   P L+ ++A+CY E PA  I+ +D+GERR I   +G+ QGDG+GP LFC  + PI+ K R  ++ L
Sbjct:  146 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHL 236

[Close]

BLAST of mRNA_H-paniculata_contig30569.8281.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.060e-20
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0

Query:    1 LIALDCTNAFNSVKRAAILEEVAFRTPGLIPFVAKCYGEKPADIIFHIDTGERRIISSNTGIHQGDGLGPALFCMPVGPILHKCREHFEAL 91
            ++  DC+NAFN+ KR AI+ + A   P L+ ++A+CY E PA  I+ +D+GERR I   +G+ QGDG+GP LFC  + PI+ K R  ++ L
Sbjct:   54 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHL 144

[Close]

BLAST of mRNA_H-paniculata_contig30569.8281.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.060e-20
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0

Query:    1 LIALDCTNAFNSVKRAAILEEVAFRTPGLIPFVAKCYGEKPADIIFHIDTGERRIISSNTGIHQGDGLGPALFCMPVGPILHKCREHFEAL 91
            ++  DC+NAFN+ KR AI+ + A   P L+ ++A+CY E PA  I+ +D+GERR I   +G+ QGDG+GP LFC  + PI+ K R  ++ L
Sbjct:  533 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHL 623

[Close]

BLAST of mRNA_H-paniculata_contig30569.8281.1 vs. uniprot
Match: A0A6H5JEJ4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ4_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.070e-20
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0

Query:    1 LIALDCTNAFNSVKRAAILEEVAFRTPGLIPFVAKCYGEKPADIIFHIDTGERRIISSNTGIHQGDGLGPALFCMPVGPILHKCREHFEAL 91
            ++  DC+NAFN+ KR AI+ + A   P L+ ++A+CY E PA  I+ +D+GERR I   +G+ QGDG+GP LFC  + PI+ K R  ++ L
Sbjct:   13 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHL 103

[Close]

BLAST of mRNA_H-paniculata_contig30569.8281.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.070e-20
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0

Query:    1 LIALDCTNAFNSVKRAAILEEVAFRTPGLIPFVAKCYGEKPADIIFHIDTGERRIISSNTGIHQGDGLGPALFCMPVGPILHKCREHFEAL 91
            ++  DC+NAFN+ KR AI+ + A   P L+ ++A+CY E PA  I+ +D+GERR I   +G+ QGDG+GP LFC  + PI+ K R  ++ L
Sbjct:  528 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHL 618

[Close]

BLAST of mRNA_H-paniculata_contig30569.8281.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.080e-20
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0

Query:    1 LIALDCTNAFNSVKRAAILEEVAFRTPGLIPFVAKCYGEKPADIIFHIDTGERRIISSNTGIHQGDGLGPALFCMPVGPILHKCREHFEAL 91
            ++  DC+NAFN+ KR AI+ + A   P L+ ++A+CY E PA  I+ +D+GERR I   +G+ QGDG+GP LFC  + PI+ K R  ++ L
Sbjct:  507 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHL 597

[Close]

BLAST of mRNA_H-paniculata_contig30569.8281.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 2.710e-20
Identity = 40/91 (43.96%), Postives = 61/91 (67.03%), Query Frame = 0

Query:    1 LIALDCTNAFNSVKRAAILEEVAFRTPGLIPFVAKCYGEKPADIIFHIDTGERRIISSNTGIHQGDGLGPALFCMPVGPILHKCREHFEAL 91
            ++  DC+NAFN+ KR AI+ + +   P L+ ++A+CY E PA  I+ +D+GERR I   +G+ QGDG+GP LFC  + PI+ K R  ++ L
Sbjct:  506 VVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHL 596

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig30569.8281.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig30569.8281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L4Y4_9PHAE	8.150e-22	45.05	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K242_9PHAE	4.650e-21	42.86	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5LL14_9PHAE	5.650e-21	45.05	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5JLG6_9PHAE	5.750e-21	45.05	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KYJ9_9PHAE	1.060e-20	45.05	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KJC0_9PHAE	1.060e-20	45.05	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5JEJ4_9PHAE	1.070e-20	45.05	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JI32_9PHAE	1.070e-20	45.05	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KMQ2_9PHAE	1.080e-20	45.05	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KKQ2_9PHAE	2.710e-20	43.96	Reverse transcriptase domain-containing protein n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..91
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..91 score: 10.413

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig30569	contig	H-paniculata_contig30569:316..588 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig30569.8281.1	mRNA_H-paniculata_contig30569.8281.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig30569 316..588 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig30569.8281.1 ID=prot_H-paniculata_contig30569.8281.1|Name=mRNA_H-paniculata_contig30569.8281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bp
LIALDCTNAFNSVKRAAILEEVAFRTPGLIPFVAKCYGEKPADIIFHIDT
GERRIISSNTGIHQGDGLGPALFCMPVGPILHKCREHFEAL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom