mRNA_H-paniculata_contig30567.8280.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30567.8280.1 vs. uniprot
Match: D8LLL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL5_ECTSI) HSP 1 Score: 73.9 bits (180), Expect = 1.030e-14 Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query: 4 QFSIASPDIDEKAIRDPDTWNMCSMIARAKSDALLQRIDPPGILITADQV 153
+FS ASPD+DEKAIRDPD MC+ IARAK+ AL +R+D P +LITADQV
Sbjct: 57 EFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQV 106
BLAST of mRNA_H-paniculata_contig30567.8280.1 vs. uniprot
Match: UPI000644A3C4 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644A3C4) HSP 1 Score: 62.4 bits (150), Expect = 1.780e-10 Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 7 FSIASPDIDEKAIRDPDTWNMCSMIARAKSDALLQRIDPPGILITADQV 153
F+ SPDIDEKAIRDPD + MI+ AK+DALL ++ P ILI +DQV
Sbjct: 36 FTTMSPDIDEKAIRDPDARKLTMMISNAKADALLSKVKEPAILICSDQV 84
BLAST of mRNA_H-paniculata_contig30567.8280.1 vs. uniprot
Match: D3BGQ7_POLPP (Maf family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BGQ7_POLPP) HSP 1 Score: 60.5 bits (145), Expect = 2.380e-9 Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 1 RQFSIASPDIDEKAIRDPDTWNMCSMIARAKSDALLQRIDPPGILITADQV 153
+ F++ SPDIDEKAIRD D + MI +AK+DALL ++ P ILI +DQV
Sbjct: 26 KDFTVMSPDIDEKAIRDTDARKLTMMITQAKTDALLDKVLEPSILICSDQV 76
BLAST of mRNA_H-paniculata_contig30567.8280.1 vs. uniprot
Match: A0A3D1CQH5_9BACT (Uncharacterized protein n=1 Tax=Candidatus Uhrbacteria bacterium TaxID=2053634 RepID=A0A3D1CQH5_9BACT) HSP 1 Score: 51.2 bits (121), Expect = 2.350e-6 Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 19 SPDIDEKAIRDPDTWNMCSMIARAKSDALLQRIDPPGILITADQV 153
SP IDEKAIR D + +A+AK++A++ +ID P ILITADQV
Sbjct: 28 SPGIDEKAIRCDDPEKLVLALAKAKAEAIVDKIDGPAILITADQV 72
BLAST of mRNA_H-paniculata_contig30567.8280.1 vs. uniprot
Match: A0A554KD27_9BACT (Uncharacterized protein n=1 Tax=Parcubacteria group bacterium Gr01-1014_33 TaxID=2017184 RepID=A0A554KD27_9BACT) HSP 1 Score: 49.3 bits (116), Expect = 6.460e-6 Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query: 4 QFSIASPDIDEKAIRDPDTWNMCSMIARAKSDALLQRIDPPGILITADQV 153
+F + IDEKAIR + + M+A AK++ALL +I P ILIT+DQV
Sbjct: 4 EFEVMPSGIDEKAIRSENPRKLVLMLAYAKAEALLPKIQEPAILITSDQV 53
BLAST of mRNA_H-paniculata_contig30567.8280.1 vs. uniprot
Match: A0A2D6MKR0_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=bacterium TaxID=1869227 RepID=A0A2D6MKR0_9BACT) HSP 1 Score: 50.1 bits (118), Expect = 6.510e-6 Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 7 FSIASPDIDEKAIRDPDTWNMCSMIARAKSDALLQRIDPPGILITADQV 153
F + PDIDEKAIR+PD + +A AK+D +++++ I+IT D V
Sbjct: 23 FEVVVPDIDEKAIRNPDPKKLVIKVANAKADDIIKKVSKEAIVITGDSV 71
BLAST of mRNA_H-paniculata_contig30567.8280.1 vs. uniprot
Match: A0A1F6Y7F0_9BACT (Nucleoside triphosphate pyrophosphatase n=2 Tax=Candidatus Nomurabacteria TaxID=1752729 RepID=A0A1F6Y7F0_9BACT) HSP 1 Score: 49.7 bits (117), Expect = 8.980e-6 Identity = 20/49 (40.82%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 7 FSIASPDIDEKAIRDPDTWNMCSMIARAKSDALLQRIDPPGILITADQV 153
F + SPD++EK I+ D + ++ARAK+DAL+ +++ P +LIT+D +
Sbjct: 23 FDVLSPDVNEKLIQINDPYERPLIVARAKTDALISKVNEPALLITSDVI 71
BLAST of mRNA_H-paniculata_contig30567.8280.1 vs. uniprot
Match: A0A0G1T8D1_9BACT (Nucleoside triphosphate pyrophosphatase n=2 Tax=Parcubacteria group TaxID=1794811 RepID=A0A0G1T8D1_9BACT) HSP 1 Score: 49.7 bits (117), Expect = 9.490e-6 Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 1
Query: 7 FSIASPDIDEKAIRDPDTWNMCSMIARAKSDALLQRIDPPGILITADQV 153
F + +IDEKAIR D + + ++RAK+ ALL +I P ILITADQV
Sbjct: 23 FDVMVSNIDEKAIRHEDFYELPLRLSRAKAAALLTKIKEPAILITADQV 71
BLAST of mRNA_H-paniculata_contig30567.8280.1 vs. uniprot
Match: A0A8J4AT59_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AT59_9CHLO) HSP 1 Score: 49.3 bits (116), Expect = 1.640e-5 Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 7 FSIASPDIDEKAIRDPDTWNMCSMIARAKSDALLQRI-----DPPGILITADQV 153
+ + + DI+EKAIRDP + S++ARAK DA++Q++ + G LIT DQV
Sbjct: 55 YEVKTADINEKAIRDPSPDKLVSLLARAKKDAIIQKMKDEGEEMRGFLITCDQV 108
BLAST of mRNA_H-paniculata_contig30567.8280.1 vs. uniprot
Match: A0A3R7LEV9_9TRYP (Septum formation protein n=1 Tax=Trypanosoma conorhini TaxID=83891 RepID=A0A3R7LEV9_9TRYP) HSP 1 Score: 48.5 bits (114), Expect = 2.760e-5 Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 1
Query: 1 RQFSIASPDIDEKAIRDPDTWNMCSMIARAKSDALLQRIDPP------GILITADQV 153
R+F PDIDEKA R PD + + +IARAK A+L+++ G+++T DQV
Sbjct: 34 REFIALPPDIDEKAWRSPDPFELTKLIARAKMQAVLEKLKDAHPHLKHGVVVTFDQV 90 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30567.8280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30567.8280.1 >prot_H-paniculata_contig30567.8280.1 ID=prot_H-paniculata_contig30567.8280.1|Name=mRNA_H-paniculata_contig30567.8280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp RQFSIASPDIDEKAIRDPDTWNMCSMIARAKSDALLQRIDPPGILITADQback to top mRNA from alignment at H-paniculata_contig30567:2367..2522+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30567.8280.1 ID=mRNA_H-paniculata_contig30567.8280.1|Name=mRNA_H-paniculata_contig30567.8280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=156bp|location=Sequence derived from alignment at H-paniculata_contig30567:2367..2522+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30567:2367..2522+ >mRNA_H-paniculata_contig30567.8280.1 ID=mRNA_H-paniculata_contig30567.8280.1|Name=mRNA_H-paniculata_contig30567.8280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=312bp|location=Sequence derived from alignment at H-paniculata_contig30567:2367..2522+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |