prot_H-paniculata_contig11290.827.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11290.827.1
Unique Nameprot_H-paniculata_contig11290.827.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length480
Homology
BLAST of mRNA_H-paniculata_contig11290.827.1 vs. uniprot
Match: A0A6H5JX10_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX10_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 1.880e-123
Identity = 272/526 (51.71%), Postives = 328/526 (62.36%), Query Frame = 0
Query:    1 VIEGVVTTSEGDRFGALIRGYLAYLHLMDGSAQHYCDVVNVVNDNKVETGVCRAAGAGG-----RRGGRGQ---RNPKNILAVVAGEASLGIPETFKELVLEQSSAIVELLDADPSVLENRLSVLLRIEGAVETPQKLDFILSSMESRAGGD-KGLELSINRMAEPHEMVDMSMQQLAAAPPRVMSQVPEIKYANEPGEGDGPLRELIDILSEVFKTRRTPTADQASSTPPPPTPSHHQYGKTPSSFDPSPTSPADTTAASLATATNKASPG------------SLLNPDASPFASP--------GLPLPPPPPLSPKSVLKAEAPPF---TPMATSGSFSNINSNXXXXXXXXXXXXXXXXXLSRSAAAPG------------------AATSGFWQSFPLFRVYEPDPAAVMPRPMKMGENCGTGTRSAAEREEAESRLRFFRAAGRVIALSLVTGAPLGLVLPEAAWAVLLGLNPTWEDNCGRDTEYKNSMKAVLEHDFGVGEDGNGLELYFSVSEKGPDGQV 476
            V+EG V +SE DRFGAL+RGYLAYLHL D S +HY  +V VV DN V+TG+  +          RRGGRGQ   RNP+NIL  +A E  LGIPE F+ELV+EQS A+ E+LDADP+VLENRLSVLLRIEGAVETPQKL++I S++++RAG   KGLEL INRMAEPH++V+++MQQLAAAPP  M+  PE+K+ANE G+GDGP+REL+D+L EVF+T RT T                         D S  S A T                           S LN  A+ F  P        G+   P P LS      A A  F   TP       S     XXXXXXXXXXXXXXX   + S AAPG                  A  +GFW+ FPLFR YEPDPAAV+PR    GE    G  SA +RE  ESRLRFFRAAGR+IA+S+V+G+PLG+V+PEA W+VLLG  PTWE+ CGRDT+Y  SM+ VL H+FG GE GNG+ELYFSVSE+G DG+V
Sbjct:  740 VVEGEVGSSEPDRFGALLRGYLAYLHLADESEEHYKAIVKVVKDNGVDTGLASSXXXXXXXXXVRRGGRGQSGGRNPRNILTAIAAETELGIPEAFRELVVEQSDAVEEILDADPAVLENRLSVLLRIEGAVETPQKLEYIASALDARAGRSRKGLELCINRMAEPHDIVEVTMQQLAAAPPWAMAPHPELKFANEEGQGDGPMRELLDLLREVFRTERTITVSGGG--------------------DGSSASDASTXXXXXXXXXXXXXXXXXXXXXXXXXXRSTLNAAAAVFVKPRPGGAGAAGVSSLPSPLLSADMARLAAA--FLTATPDDYEVPRSGXXXXXXXXXXXXXXXXXXXPTTAPSLAAPGEVWTQTREEEARDRSRKVAEVAGFWKQFPLFRRYEPDPAAVVPR--AAGE---AGVNSANDREGMESRLRFFRAAGRIIAMSVVSGSPLGVVMPEAIWSVLLGSTPTWEECCGRDTQYLESMRKVLAHEFGKGEGGNGMELYFSVSERGVDGKV 1238          
BLAST of mRNA_H-paniculata_contig11290.827.1 vs. uniprot
Match: D8LKA6_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA6_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 4.940e-120
Identity = 256/575 (44.52%), Postives = 317/575 (55.13%), Query Frame = 0
Query:    1 VIEGVVTTSEGDRFGALIRGYLAYLHLMDGSAQHYCDVVNVVNDNKVETGVCRAAG---------AGGRRGGRGQ---RNPKNILAVVAGEASLGIPETFKELVLEQSSAIVELLDADPSVLENRLSVLLRIEGAVETPQKLDFILSSMESRAG-GDKGLELSINRMAEPHEMVDMSMQQLAAAPPRVMSQVPEIKYANEPGEGDGPLRELIDILSEVFKTRRTPTADQASSTPPPPTPSHHQYGKTPSSFDPSPTSPADTTAASLATATNKASPGSLLNPDASPFASPGLP-------------LPPPPPLSPKSVLKAE----APPFTPMATSGS-----------------------FSNINSNXXXXXXXXXXXXXXXXXLSRSA----------------------------AAPGAATS------------------GFWQSFPLFRVYEPDPAAVMPRPMKMGENCGTGTRSAAEREEAESRLRFFRAAGRVIALSLVTGAPLGLVLPEAAWAVLLGLNPTWEDNCGRDTEYKNSMKAVLEHDFGVGEDGNGLELYFSVSEKGPDGQV 476
            V+EG V  +E DRFGAL+RGYLAYLHL D S +HY  +V VV +N V+TG+  +           +G RRGGRGQ   RNP+NIL  +A E  LGIPE F+ELV+EQS A+ E+LDADP+VLENRLSVLLRIEGAVETPQKLD+I S++E+RAG   KGLEL +NRMAEPHE+V+++MQQLAAAPPR M+  PE+K+ NE G+GDGP+REL+D+LSEVF   RT T   A                T                        +++  S LNP A+ F  P                LP PP  +  + L A     AP    +  SG                         +N +                   LS                               A PG  ++                  GFW+ FPLFR YEPDPAAV+PR    GE    G  SA +RE  ESRLRFFRAAGR+IA+S+V+G+PLG+V+PEA W+VLLG  PTWED CGRDT+Y  SM+ VL H+FG GE GNG+ELYFSVSE+G DG+V
Sbjct:  498 VVEGDVGGTEPDRFGALLRGYLAYLHLADDSEEHYKAIVKVVKENGVDTGLASSXXXXXXXXXXXSGVRRGGRGQSAGRNPRNILTAIAAETELGIPEAFRELVVEQSDAVEEILDADPAVLENRLSVLLRIEGAVETPQKLDYIASALEARAGRSGKGLELCVNRMAEPHEIVEVTMQQLAAAPPRAMAPHPELKFVNEQGQGDGPMRELLDLLSEVFNPERTITVSGAGG--------GSSASDTXXXXXXXXXXXXXXXXXXXXXXXXRSTGRSTLNPAAAVFVKPXXXXXXXXXXXXXASSLPSPPVSADMARLAAAFLAAAPDDYEVPRSGXXXXXXXXXXXXXXXXXXXPGVDRLTNASREADESEPWRSRGVRRIVMLSHEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPGETSTQIREEAARDRSRKVSEVAGFWKQFPLFRRYEPDPAAVVPR--AAGE---AGVNSANDREGMESRLRFFRAAGRIIAMSVVSGSPLGVVMPEAVWSVLLGSTPTWEDCCGRDTQYLESMRKVLAHEFGKGEGGNGMELYFSVSERGIDGKV 1059          
BLAST of mRNA_H-paniculata_contig11290.827.1 vs. uniprot
Match: A0A7S3UXC4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXC4_HETAK)

HSP 1 Score: 58.2 bits (139), Expect = 1.430e-5
Identity = 34/105 (32.38%), Postives = 51/105 (48.57%), Query Frame = 0
Query:  344 SGFWQSFPLFRVYEPDPAAVMPRPMKMGENCGTGTRSAAEREEAESRLRFFRAAGRVIALSLVTGAPLGLVLPEAAWAVLLGLNPTWEDNCGRDTEYKNSMKAVL 448
            S FW   P F   +     V+PR               A  ++ +   R+F+ AGRV+ LS+   APLG+ +P+A WA++LG  PT E+    D     S++ VL
Sbjct:   36 SDFWTFAPFFEKVDSRSPLVIPR---------------AYGDDFDQVSRYFQTAGRVLGLSIKQAAPLGVRIPKAVWAIILGREPTIEECLAEDPVTARSLRQVL 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11290.827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JX10_9PHAE1.880e-12351.71HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LKA6_ECTSI4.940e-12044.52HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3UXC4_HETAK1.430e-532.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1750.10coord: 385..425
e-value: 6.6E-8
score: 34.4
NoneNo IPR availableGENE3D3.30.2160.10coord: 426..470
e-value: 6.6E-8
score: 34.4
IPR000569HECT domainPFAMPF00632HECTcoord: 349..470
e-value: 3.5E-5
score: 23.5
IPR035983HECT, E3 ligase catalytic domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 388..461

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11290contigH-paniculata_contig11290:2298..8059 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11290.827.1mRNA_H-paniculata_contig11290.827.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11290 2298..8059 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11290.827.1 ID=prot_H-paniculata_contig11290.827.1|Name=mRNA_H-paniculata_contig11290.827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=480bp
VIEGVVTTSEGDRFGALIRGYLAYLHLMDGSAQHYCDVVNVVNDNKVETG
VCRAAGAGGRRGGRGQRNPKNILAVVAGEASLGIPETFKELVLEQSSAIV
ELLDADPSVLENRLSVLLRIEGAVETPQKLDFILSSMESRAGGDKGLELS
INRMAEPHEMVDMSMQQLAAAPPRVMSQVPEIKYANEPGEGDGPLRELID
ILSEVFKTRRTPTADQASSTPPPPTPSHHQYGKTPSSFDPSPTSPADTTA
ASLATATNKASPGSLLNPDASPFASPGLPLPPPPPLSPKSVLKAEAPPFT
PMATSGSFSNINSNNNRGGHRMRGGGGGGGGLSRSAAAPGAATSGFWQSF
PLFRVYEPDPAAVMPRPMKMGENCGTGTRSAAEREEAESRLRFFRAAGRV
IALSLVTGAPLGLVLPEAAWAVLLGLNPTWEDNCGRDTEYKNSMKAVLEH
DFGVGEDGNGLELYFSVSEKGPDGQVRKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
IPR035983Hect_E3_ubiquitin_ligase