mRNA_H-paniculata_contig30542.8274.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30542.8274.1 vs. uniprot
Match: A0A6H5JFL4_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL4_9PHAE) HSP 1 Score: 305 bits (782), Expect = 5.900e-100 Identity = 153/194 (78.87%), Postives = 176/194 (90.72%), Query Frame = 1
Query: 1 MAKSAPARHAGIITFNGEVSLIGDGSGDARVVAGDRLFDAGTLREVGRAYPLSQPISETRDRLSERLFALEEGGPTALGPAVVAGLSMLKERGGRGSRMVLCTDGLANVGLGALDDFQTDGERTAAEAFYENLGRAAAEDGVTVDVVSMDSETCDLENLGALSDMSGGTVTKVKASELASNFAGILANPILASQ 582
MAK P RHAG++TFNGEVSLIGDGSGD+RVVAGDRL D L+EVGRAYPLS+PISE + RL++RLFALEEGGPTALGPAVVAGLSMLKERGGRGSR+VLCTDGLANVGLGALDD Q D +R AE+FYE LGR ++ +GVT+DVVS+DS+ CDLENLGA++D+SGGTVT+VKAS+LASNFAGILANPILA+Q
Sbjct: 174 MAKETPTRHAGLVTFNGEVSLIGDGSGDSRVVAGDRLSDGEALKEVGRAYPLSRPISEAKSRLTDRLFALEEGGPTALGPAVVAGLSMLKERGGRGSRLVLCTDGLANVGLGALDDLQNDEQRQLAESFYEELGRESSGNGVTIDVVSVDSDACDLENLGAMADISGGTVTRVKASDLASNFAGILANPILATQ 367
BLAST of mRNA_H-paniculata_contig30542.8274.1 vs. uniprot
Match: D8LK28_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK28_ECTSI) HSP 1 Score: 308 bits (790), Expect = 5.620e-97 Identity = 155/195 (79.49%), Postives = 178/195 (91.28%), Query Frame = 1
Query: 1 MAKSAPARHAGIITFNGEVSLIGDGSGDARVVAGDRLFDAGTLREVGRAYPLSQPISETRDRLSERLFALEEGGPTALGPAVVAGLSMLKERGGRGSRMVLCTDGLANVGLGALDDFQTDGERTAAEAFYENLGRAAAEDGVTVDVVSMDSETCDLENLGALSDMSGGTVTKVKASELASNFAGILANPILASQV 585
MAK P+RHAGI+TFNGEVSLIGDGSGD+RVVAGDRL D L+EVGRAYPLS+PISE + RL++RLFALEEGGPTALGPAVVAGLSMLKERGGRGSR+VLCTDGLANVGLGALDD Q D +R AE+FYE+LGR ++ +GVT+DVVS+DS+ CDLENLGA++D+SGGTVT+VKAS+L SNFAGILANPILASQV
Sbjct: 368 MAKETPSRHAGIVTFNGEVSLIGDGSGDSRVVAGDRLSDGEALKEVGRAYPLSRPISEAKSRLADRLFALEEGGPTALGPAVVAGLSMLKERGGRGSRLVLCTDGLANVGLGALDDLQNDEQRQVAESFYEDLGRESSGNGVTIDVVSVDSDACDLENLGAMADVSGGTVTRVKASDLTSNFAGILANPILASQV 562
BLAST of mRNA_H-paniculata_contig30542.8274.1 vs. uniprot
Match: A0A6A7G8Q6_9CRUS (Sec23/Sec24 trunk domain containing protein n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G8Q6_9CRUS) HSP 1 Score: 176 bits (445), Expect = 1.210e-47 Identity = 88/195 (45.13%), Postives = 133/195 (68.21%), Query Frame = 1
Query: 1 MAKSAPARHAGIITFNGEVSLIGDGSGDARVVAGDRLFDAGTLREVGRAYPLSQPISETRDRLSERLFALEEGGPTALGPAVVAGLSMLKERGGRGSRMVLCTDGLANVGLGALDDFQTDGERTAAEAFYENLGRAAAEDGVTVDVVSMDSETCDLENLGALSDMSGGTVTKVKASELASNFAGILANPILASQV 585
+ K+ P G++TF +V++ GDG+ VVAGD+L D L+++GR Y L PI ++ + L+E+LF LEE GPTALGP + ++M + GS ++LCTDGLANVGLG LD +D E+ AE +YE +G A+ +GVTV+V+S+ E C LEN+G ++DM+GG+V K+ + ++ F+GIL NP++A+ V
Sbjct: 392 LQKTRPKYRVGLVTFARDVTIYGDGTTAIEVVAGDKLADLAKLQDIGRKYALEVPIEKSMNDLAEKLFGLEESGPTALGPGLAVAVAMASVK--NGSEVILCTDGLANVGLGTLDA-SSDAEKEKAENWYEGMGNYASMNGVTVNVISISDEECQLENVGRVADMTGGSVDKIDSLQITHKFSGILQNPVIATNV 583
BLAST of mRNA_H-paniculata_contig30542.8274.1 vs. uniprot
Match: A0A835Z291_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z291_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.440e-46 Identity = 101/196 (51.53%), Postives = 129/196 (65.82%), Query Frame = 1
Query: 1 MAKSAPARHAGIITFNGEVSLIGDGSGDA-RVVAGDRLFDAGTLREVGRAYPLSQPISETRDRLSERLFALEEGGPTALGPAVVAGLSMLKERGGRGSRMVLCTDGLANVGLGALDDFQTDGERTAAEAFYENLGRAAAEDGVTVDVVSMDSETCDLENLGALSDMSGGTVTKVKASELASNFAGILANPILASQV 585
MA+ P+ AG+ITF+G++++IGD + A VVAG L DA L ++G A L++ + R L RLFAL EGGPTALGPA GL+ G GSR+V+CTDGLANVG+G+LD G AA AFYE L AA+ GV VDVVS+ CDLE LG +SD++GGTVT+V LA NFA +LA P++A V
Sbjct: 256 MARDTPSARAGLITFSGDITVIGDAAAAAPTVVAGAALHDAHALADLGAACALTRGVGAARAALEARLFALSEGGPTALGPAAALGLAQAIACGA-GSRLVVCTDGLANVGVGSLD-----GGGDAAPAFYEYLAGRAAQHGVIVDVVSIAGGGCDLETLGVMSDLTGGTVTRVDPLSLADNFATMLAEPLIAINV 445
BLAST of mRNA_H-paniculata_contig30542.8274.1 vs. uniprot
Match: J9J4K4_9SPIT (VWFA domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9J4K4_9SPIT) HSP 1 Score: 170 bits (430), Expect = 9.510e-46 Identity = 91/198 (45.96%), Postives = 132/198 (66.67%), Query Frame = 1
Query: 1 MAKSAPARHAGIITFNGEVSLIGDGSGDARVVAGDRLFDAGTLREVGR---AYPLSQPISETRDRLSERLFALEEGGPTALGPAVVAGLSMLKERGGRGSRMVLCTDGLANVGLGALDDFQTDGERTAAEAFYENLGRAAAEDGVTVDVVSMDSETCDLENLGALSDMSGGTVTKVKASELASNFAGILANPILASQV 585
M++ AP R G++TFNGEV+LIGD + + +AGD+LFD L G + L ISETR++L L ++EE GPTALGPA+V +SM + G GS +VLCTDGLANVGLGA D+ ++D E + FYE LG+ A + GVTV ++S+ + C++++L +S+M+GG V +V +L NF+ IL P++A+ V
Sbjct: 330 MSQGAPNRKVGLVTFNGEVTLIGDATKAPQTIAGDKLFDYDFLVNNGLTEGSSRLQNTISETREKLQHALMSVEETGPTALGPALVTAISMAAQ-GNSGSTVVLCTDGLANVGLGAFDEIKSDEELRKTDEFYEILGQFAKDKGVTVSIISIAGDECNIDSLSRISEMTGGNVERVDPVQLTQNFSNILQLPVIATNV 526
BLAST of mRNA_H-paniculata_contig30542.8274.1 vs. uniprot
Match: A0A6T7CTJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7CTJ1_9STRA) HSP 1 Score: 165 bits (418), Expect = 4.120e-45 Identity = 93/189 (49.21%), Postives = 121/189 (64.02%), Query Frame = 1
Query: 31 GIITFNGEVSLIGDGSGDARVVAGDRLFDAGTLREVGR--AYPLSQPISETRDRLSERLFALEEGGPTALGPAVVAGLSMLKERGGRGSRMVLCTDGLANVGLGALDDFQTDGE--RTAAEAFYENLGRAAAEDGVTVDVVSMDSETCDLENLGALSDMSGGTVTKVKASELASNFAGILANPILASQV 585
G+ITF+ EV++ GDG+G VAGDRL D L G+ + +SE+ L E +F LEE GPTALGPAV L M+ G+R+VLCTDGLANVGLG+LD+ R AAE FY +LG +A G VDV+S+ + DLENLGA+S+ +GGTVT+V L +FAGIL NP++A+ V
Sbjct: 297 GLITFSNEVTIYGDGTGQPTTVAGDRLNDMEALLASGQDARARMGLDVSESATALGEAIFGLEESGPTALGPAVTVALGMVSGFNAAGARIVLCTDGLANVGLGSLDEIPEGANPIREAAEGFYHSLGESAVAAGAVVDVISIIGQDADLENLGAVSEATGGTVTRVDPVGLQQDFAGILQNPVVATNV 485
BLAST of mRNA_H-paniculata_contig30542.8274.1 vs. uniprot
Match: A0A078AXN5_STYLE (Type a von willebrand factor domain-containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AXN5_STYLE) HSP 1 Score: 167 bits (424), Expect = 5.080e-45 Identity = 91/198 (45.96%), Postives = 130/198 (65.66%), Query Frame = 1
Query: 1 MAKSAPARHAGIITFNGEVSLIGDGSGDARVVAGDRLFDAGTLREVGRAYP---LSQPISETRDRLSERLFALEEGGPTALGPAVVAGLSMLKERGGRGSRMVLCTDGLANVGLGALDDFQTDGERTAAEAFYENLGRAAAEDGVTVDVVSMDSETCDLENLGALSDMSGGTVTKVKASELASNFAGILANPILASQV 585
MA AP R GI+TFN EV++IGDGS +++AGD+LF L E G A L I++T+D+L ++ ++EE GPTALGPA+ +SM + G GS +VLCTDGLANVGLGA D+ +T+ E + FYE+LG A GVTV +VS+ E C+++ L +S+ +GG+V +V +L NF+ IL P++A+ V
Sbjct: 290 MAIGAPDRKVGIVTFNSEVTIIGDGSKAPQIIAGDKLFSYDYLIENGTAEGQNRLQHAINKTKDQLVNQIMSVEETGPTALGPALATAISMAAQ-GNPGSTVVLCTDGLANVGLGAFDEIKTEEESKKVDQFYESLGEFAKNKGVTVSIVSIAGEECNIDTLSTISEHTGGSVERVDPVQLTQNFSNILKLPVIATNV 486
BLAST of mRNA_H-paniculata_contig30542.8274.1 vs. uniprot
Match: J9F2X1_9SPIT (VWFA domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9F2X1_9SPIT) HSP 1 Score: 166 bits (419), Expect = 5.230e-44 Identity = 84/193 (43.52%), Postives = 132/193 (68.39%), Query Frame = 1
Query: 16 PARHAGIITFNGEVSLIGDGSGDARVVAGDRLFDAGTLREVG---RAYPLSQPISETRDRLSERLFALEEGGPTALGPAVVAGLSMLKERGGRGSRMVLCTDGLANVGLGALDDFQTDGERTAAEAFYENLGRAAAEDGVTVDVVSMDSETCDLENLGALSDMSGGTVTKVKASELASNFAGILANPILASQV 585
P R G++TFN EV++IGDG + +AGD+L++ L + G + L++PI ET+ +L ++L +LEEGGPTALGPAV+ ++M E G GS ++LCTDGLANVGLG D+ T+ E + YE +G+ A G+TV++VS++ E C+++ + +S+++GG V +VK ++L NF+ IL+ P+LA+ V
Sbjct: 445 PERKIGLVTFNNEVTVIGDGMQIPQTIAGDKLYNFDYLLQNGIESQKLYLNKPIKETKSKLEQKLLSLEEGGPTALGPAVLTAIAMASE-GAPGSSVILCTDGLANVGLGNFDEVFTEEENQKVDEIYERMGQYAKSKGLTVNIVSIEGEECNIDTISKISEITGGEVQRVKPADLIENFSNILSLPVLATNV 636
BLAST of mRNA_H-paniculata_contig30542.8274.1 vs. uniprot
Match: A0A6A7G885_9CRUS (Sec23/Sec24 trunk domain containing protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G885_9CRUS) HSP 1 Score: 164 bits (415), Expect = 9.330e-44 Identity = 83/195 (42.56%), Postives = 125/195 (64.10%), Query Frame = 1
Query: 1 MAKSAPARHAGIITFNGEVSLIGDGSGDARVVAGDRLFDAGTLREVGRAYPLSQPISETRDRLSERLFALEEGGPTALGPAVVAGLSMLKERGGRGSRMVLCTDGLANVGLGALDDFQTDGERTAAEAFYENLGRAAAEDGVTVDVVSMDSETCDLENLGALSDMSGGTVTKVKASELASNFAGILANPILASQV 585
+++ P G++TF+G+VS+IGDG+ + GD+L + L++ GR L + ++ + LS +LF LEEGGPTALGPA+ +S+ + GS+++LCTDGLANVGLG+LD ++ E AE +YE +G AA GV VD++S+ + C LENLG + D++ G V +V +L NF GIL P +A+ V
Sbjct: 215 LSEEHPNYRVGLVTFSGDVSVIGDGTIPVETITGDKLMNLEKLQQAGRNIGLENSVKDSYEALSTKLFELEEGGPTALGPALAVSISLASQA--NGSKVILCTDGLANVGLGSLDGLSSEDELQNAEDWYEGIGNYAALSGVMVDIISITDDQCSLENLGKVCDLTHGKVDRVNPLKLTENFVGILEKPAIATLV 407
BLAST of mRNA_H-paniculata_contig30542.8274.1 vs. uniprot
Match: L8GVX0_ACACA (Sec23/Sec24 trunk domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVX0_ACACA) HSP 1 Score: 162 bits (409), Expect = 4.260e-43 Identity = 83/195 (42.56%), Postives = 124/195 (63.59%), Query Frame = 1
Query: 1 MAKSAPARHAGIITFNGEVSLIGDGSGDARVVAGDRLFDAGTLREVGRAYPLSQPISETRDRLSERLFALEEGGPTALGPAVVAGLSMLKERGGRGSRMVLCTDGLANVGLGALDDFQTDGERTAAEAFYENLGRAAAEDGVTVDVVSMDSETCDLENLGALSDMSGGTVTKVKASELASNFAGILANPILASQV 585
M + P+R G++TFNGEV+++GDG + GD+L D L ++G++ PIS+ + LS +LFALEE GPTALGPA++ + M + GS +V+CTDGL+NVGLG LDD T+ ++ A+E FYE +G A GVT+ ++ + + C +E LGALS+ + G V V + F+ IL+ PI+A+ V
Sbjct: 242 MEQEQPSRRVGLVTFNGEVTVVGDGYQPPVTITGDKLDDYDQLLQLGKSQSPGAPISKAKKALSSKLFALEETGPTALGPALLVCVGMASQN--PGSEIVVCTDGLSNVGLGQLDDINTEEKKRASERFYEQIGDFAVLHGVTISIIGIKGQDCRMEQLGALSEKTNGGVNIVDPLRITQEFSSILSQPIIATNV 434 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30542.8274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30542.8274.1 >prot_H-paniculata_contig30542.8274.1 ID=prot_H-paniculata_contig30542.8274.1|Name=mRNA_H-paniculata_contig30542.8274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp MAKSAPARHAGIITFNGEVSLIGDGSGDARVVAGDRLFDAGTLREVGRAYback to top mRNA from alignment at H-paniculata_contig30542:568..2815- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30542.8274.1 ID=mRNA_H-paniculata_contig30542.8274.1|Name=mRNA_H-paniculata_contig30542.8274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2248bp|location=Sequence derived from alignment at H-paniculata_contig30542:568..2815- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30542:568..2815- >mRNA_H-paniculata_contig30542.8274.1 ID=mRNA_H-paniculata_contig30542.8274.1|Name=mRNA_H-paniculata_contig30542.8274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig30542:568..2815- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |