mRNA_H-paniculata_contig11290.827.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11290.827.1
Unique NamemRNA_H-paniculata_contig11290.827.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig11290.827.1 vs. uniprot
Match: A0A6H5JX10_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX10_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 1.880e-123
Identity = 272/526 (51.71%), Postives = 328/526 (62.36%), Query Frame = 1 
Query:    1 VIEGVVTTSEGDRFGALIRGYLAYLHLMDGSAQHYCDVVNVVNDNKVETGVCRAAGAGG-----RRGGRGQ---RNPKNILAVVAGEASLGIPETFKELVLEQSSAIVELLDADPSVLENRLSVLLRIEGAVETPQKLDFILSSMESRAGGD-KGLELSINRMAEPHEMVDMSMQQLAAAPPRVMSQVPEIKYANEPGEGDGPLRELIDILSEVFKTRRTPTADQASSTPPPPTPSHHQYGKTPSSFDPSPTSPADTTAASLATATNKASPG------------SLLNPDASPFASP--------GLPLPPPPPLSPKSVLKAEAPPF---TPMATSGSFSNINSNXXXXXXXXXXXXXXXXXLSRSAAAPG------------------AATSGFWQSFPLFRVYEPDPAAVMPRPMKMGENCGTGTRSAAEREEAESRLRFFRAAGRVIALSLVTGAPLGLVLPEAAWAVLLGLNPTWEDNCGRDTEYKNSMKAVLEHDFGVGEDGNGLELYFSVSEKGPDGQV 1428
            V+EG V +SE DRFGAL+RGYLAYLHL D S +HY  +V VV DN V+TG+  +          RRGGRGQ   RNP+NIL  +A E  LGIPE F+ELV+EQS A+ E+LDADP+VLENRLSVLLRIEGAVETPQKL++I S++++RAG   KGLEL INRMAEPH++V+++MQQLAAAPP  M+  PE+K+ANE G+GDGP+REL+D+L EVF+T RT T                         D S  S A T                           S LN  A+ F  P        G+   P P LS      A A  F   TP       S     XXXXXXXXXXXXXXX   + S AAPG                  A  +GFW+ FPLFR YEPDPAAV+PR    GE    G  SA +RE  ESRLRFFRAAGR+IA+S+V+G+PLG+V+PEA W+VLLG  PTWE+ CGRDT+Y  SM+ VL H+FG GE GNG+ELYFSVSE+G DG+V
Sbjct:  740 VVEGEVGSSEPDRFGALLRGYLAYLHLADESEEHYKAIVKVVKDNGVDTGLASSXXXXXXXXXVRRGGRGQSGGRNPRNILTAIAAETELGIPEAFRELVVEQSDAVEEILDADPAVLENRLSVLLRIEGAVETPQKLEYIASALDARAGRSRKGLELCINRMAEPHDIVEVTMQQLAAAPPWAMAPHPELKFANEEGQGDGPMRELLDLLREVFRTERTITVSGGG--------------------DGSSASDASTXXXXXXXXXXXXXXXXXXXXXXXXXXRSTLNAAAAVFVKPRPGGAGAAGVSSLPSPLLSADMARLAAA--FLTATPDDYEVPRSGXXXXXXXXXXXXXXXXXXXPTTAPSLAAPGEVWTQTREEEARDRSRKVAEVAGFWKQFPLFRRYEPDPAAVVPR--AAGE---AGVNSANDREGMESRLRFFRAAGRIIAMSVVSGSPLGVVMPEAIWSVLLGSTPTWEECCGRDTQYLESMRKVLAHEFGKGEGGNGMELYFSVSERGVDGKV 1238
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BLAST of mRNA_H-paniculata_contig11290.827.1 vs. uniprot
Match: D8LKA6_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA6_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 4.940e-120
Identity = 256/575 (44.52%), Postives = 317/575 (55.13%), Query Frame = 1 
Query:    1 VIEGVVTTSEGDRFGALIRGYLAYLHLMDGSAQHYCDVVNVVNDNKVETGVCRAAG---------AGGRRGGRGQ---RNPKNILAVVAGEASLGIPETFKELVLEQSSAIVELLDADPSVLENRLSVLLRIEGAVETPQKLDFILSSMESRAG-GDKGLELSINRMAEPHEMVDMSMQQLAAAPPRVMSQVPEIKYANEPGEGDGPLRELIDILSEVFKTRRTPTADQASSTPPPPTPSHHQYGKTPSSFDPSPTSPADTTAASLATATNKASPGSLLNPDASPFASPGLP-------------LPPPPPLSPKSVLKAE----APPFTPMATSGS-----------------------FSNINSNXXXXXXXXXXXXXXXXXLSRSA----------------------------AAPGAATS------------------GFWQSFPLFRVYEPDPAAVMPRPMKMGENCGTGTRSAAEREEAESRLRFFRAAGRVIALSLVTGAPLGLVLPEAAWAVLLGLNPTWEDNCGRDTEYKNSMKAVLEHDFGVGEDGNGLELYFSVSEKGPDGQV 1428
            V+EG V  +E DRFGAL+RGYLAYLHL D S +HY  +V VV +N V+TG+  +           +G RRGGRGQ   RNP+NIL  +A E  LGIPE F+ELV+EQS A+ E+LDADP+VLENRLSVLLRIEGAVETPQKLD+I S++E+RAG   KGLEL +NRMAEPHE+V+++MQQLAAAPPR M+  PE+K+ NE G+GDGP+REL+D+LSEVF   RT T   A                T                        +++  S LNP A+ F  P                LP PP  +  + L A     AP    +  SG                         +N +                   LS                               A PG  ++                  GFW+ FPLFR YEPDPAAV+PR    GE    G  SA +RE  ESRLRFFRAAGR+IA+S+V+G+PLG+V+PEA W+VLLG  PTWED CGRDT+Y  SM+ VL H+FG GE GNG+ELYFSVSE+G DG+V
Sbjct:  498 VVEGDVGGTEPDRFGALLRGYLAYLHLADDSEEHYKAIVKVVKENGVDTGLASSXXXXXXXXXXXSGVRRGGRGQSAGRNPRNILTAIAAETELGIPEAFRELVVEQSDAVEEILDADPAVLENRLSVLLRIEGAVETPQKLDYIASALEARAGRSGKGLELCVNRMAEPHEIVEVTMQQLAAAPPRAMAPHPELKFVNEQGQGDGPMRELLDLLSEVFNPERTITVSGAGG--------GSSASDTXXXXXXXXXXXXXXXXXXXXXXXXRSTGRSTLNPAAAVFVKPXXXXXXXXXXXXXASSLPSPPVSADMARLAAAFLAAAPDDYEVPRSGXXXXXXXXXXXXXXXXXXXPGVDRLTNASREADESEPWRSRGVRRIVMLSHEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPGETSTQIREEAARDRSRKVSEVAGFWKQFPLFRRYEPDPAAVVPR--AAGE---AGVNSANDREGMESRLRFFRAAGRIIAMSVVSGSPLGVVMPEAVWSVLLGSTPTWEDCCGRDTQYLESMRKVLAHEFGKGEGGNGMELYFSVSERGIDGKV 1059
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BLAST of mRNA_H-paniculata_contig11290.827.1 vs. uniprot
Match: A0A7S3UXC4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXC4_HETAK)

HSP 1 Score: 58.2 bits (139), Expect = 1.430e-5
Identity = 34/105 (32.38%), Postives = 51/105 (48.57%), Query Frame = 1 
Query: 1030 SGFWQSFPLFRVYEPDPAAVMPRPMKMGENCGTGTRSAAEREEAESRLRFFRAAGRVIALSLVTGAPLGLVLPEAAWAVLLGLNPTWEDNCGRDTEYKNSMKAVL 1344
            S FW   P F   +     V+PR               A  ++ +   R+F+ AGRV+ LS+   APLG+ +P+A WA++LG  PT E+    D     S++ VL
Sbjct:   36 SDFWTFAPFFEKVDSRSPLVIPR---------------AYGDDFDQVSRYFQTAGRVLGLSIKQAAPLGVRIPKAVWAIILGREPTIEECLAEDPVTARSLRQVL 125
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11290.827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JX10_9PHAE1.880e-12351.71HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LKA6_ECTSI4.940e-12044.52HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3UXC4_HETAK1.430e-532.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11290contigH-paniculata_contig11290:2298..8059 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.8
Seed ortholog evalue1.8e-105
Seed eggNOG ortholog2880.D8LKA6
KEGG koko:K10592
KEGG Pathwayko04120,map04120
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006811,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007417,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016032,GO:0016567,GO:0016740,GO:0019058,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019941,GO:0023052,GO:0030163,GO:0030260,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0034220,GO:0036211,GO:0043161,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044409,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046718,GO:0048519,GO:0048523,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051603,GO:0051701,GO:0051704,GO:0051716,GO:0051806,GO:0051828,GO:0055085,GO:0060255,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990234,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.ubiquitin protein ligase activity
EggNOG OGsCOG5021@1,KOG0939@2759
EC2.3.2.26
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Exons7
Model size1440
Cds size1440
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928835.948211-CDS-H-paniculata_contig11290:2297..24061622928835.948211-CDS-H-paniculata_contig11290:2297..2406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 2298..2406 +
1691480638.6718388-CDS-H-paniculata_contig11290:2297..24061691480638.6718388-CDS-H-paniculata_contig11290:2297..2406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 2298..2406 +
1622928836.226851-CDS-H-paniculata_contig11290:3544..37081622928836.226851-CDS-H-paniculata_contig11290:3544..3708Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 3545..3708 +
1691480638.681622-CDS-H-paniculata_contig11290:3544..37081691480638.681622-CDS-H-paniculata_contig11290:3544..3708Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 3545..3708 +
1622928836.387812-CDS-H-paniculata_contig11290:5222..54191622928836.387812-CDS-H-paniculata_contig11290:5222..5419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 5223..5419 +
1691480638.6892784-CDS-H-paniculata_contig11290:5222..54191691480638.6892784-CDS-H-paniculata_contig11290:5222..5419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 5223..5419 +
1622928836.4039192-CDS-H-paniculata_contig11290:5900..59951622928836.4039192-CDS-H-paniculata_contig11290:5900..5995Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 5901..5995 +
1691480638.699675-CDS-H-paniculata_contig11290:5900..59951691480638.699675-CDS-H-paniculata_contig11290:5900..5995Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 5901..5995 +
1622928836.4186418-CDS-H-paniculata_contig11290:6472..70831622928836.4186418-CDS-H-paniculata_contig11290:6472..7083Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 6473..7083 +
1691480638.7098126-CDS-H-paniculata_contig11290:6472..70831691480638.7098126-CDS-H-paniculata_contig11290:6472..7083Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 6473..7083 +
1622928836.4309788-CDS-H-paniculata_contig11290:7609..77051622928836.4309788-CDS-H-paniculata_contig11290:7609..7705Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 7610..7705 +
1691480638.7189245-CDS-H-paniculata_contig11290:7609..77051691480638.7189245-CDS-H-paniculata_contig11290:7609..7705Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 7610..7705 +
1622928836.4454694-CDS-H-paniculata_contig11290:7891..80591622928836.4454694-CDS-H-paniculata_contig11290:7891..8059Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 7892..8059 +
1691480638.7386148-CDS-H-paniculata_contig11290:7891..80591691480638.7386148-CDS-H-paniculata_contig11290:7891..8059Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11290 7892..8059 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11290.827.1prot_H-paniculata_contig11290.827.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11290 2298..8059 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11290.827.1

>prot_H-paniculata_contig11290.827.1 ID=prot_H-paniculata_contig11290.827.1|Name=mRNA_H-paniculata_contig11290.827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=480bp
VIEGVVTTSEGDRFGALIRGYLAYLHLMDGSAQHYCDVVNVVNDNKVETG
VCRAAGAGGRRGGRGQRNPKNILAVVAGEASLGIPETFKELVLEQSSAIV
ELLDADPSVLENRLSVLLRIEGAVETPQKLDFILSSMESRAGGDKGLELS
INRMAEPHEMVDMSMQQLAAAPPRVMSQVPEIKYANEPGEGDGPLRELID
ILSEVFKTRRTPTADQASSTPPPPTPSHHQYGKTPSSFDPSPTSPADTTA
ASLATATNKASPGSLLNPDASPFASPGLPLPPPPPLSPKSVLKAEAPPFT
PMATSGSFSNINSNNNRGGHRMRGGGGGGGGLSRSAAAPGAATSGFWQSF
PLFRVYEPDPAAVMPRPMKMGENCGTGTRSAAEREEAESRLRFFRAAGRV
IALSLVTGAPLGLVLPEAAWAVLLGLNPTWEDNCGRDTEYKNSMKAVLEH
DFGVGEDGNGLELYFSVSEKGPDGQVRKK*
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mRNA from alignment at H-paniculata_contig11290:2298..8059+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11290.827.1 ID=mRNA_H-paniculata_contig11290.827.1|Name=mRNA_H-paniculata_contig11290.827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5762bp|location=Sequence derived from alignment at H-paniculata_contig11290:2298..8059+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCATCGAGGGCGTAGTGACCACTTCTGAAGGAGATCGCTTCGGAGCGCT
TATTCGGGGTTATCTGGCGTACCTGCACCTAATGGACGGCAGCGCACAAC
ACTACTGTGGTGGGTTTGAAGAGTATGACCTGACACTATCACGTACTACA
TGGTCACACGTAATTCCTTTGTGTTTGTAGTTCCCATGACCCATACGCAT
GAGGACTCGCTGCGCCTGCATCTGCTCGCTATACTGTGTGCAGGTGCTAG
TTGTTTTTTAATGCGTGTGAGATGGACATGACTCCAAAGTATACAAGAAT
GTATTTTATTATTACCCAACGTTTGCGTGATGTCCTTGGTGGACGGGAGA
AACGAAGGGAAAGAGATAGGGTTACTCCTGGTGCTTACTGCGTGCGTTTG
CAAGTAGCAAGCCTCAACTTTAGTTTCGGATTTTGAGAGAGTGCGTAGAT
TTATATAAACTTTGGGCTCTGTTTGGTCCACATGAGTTTCTTCAAGGAGT
TTTTTTTTTTTTTTTTAAGTTGGAGACAAAACGCATGTAGTCTGAAGTGG
TGCTTCTGTTGCTGACGGTGTATGCTGTGGAGTTGATATGTATTACATTG
AATTACTTTACAGGTAGTGCTGCTGGGTTGCGATGGGGGATGGGCATACT
CATTTTCAGGTTGGTGTAATTATTGGACCGTTATGGACCACGTGTCCTTG
GGAGCATGAAGCTTTGTGCCCATTAGAGCGATTTTTTATGGGTAATCGAT
GTTTTCCGATGGGCTGCGGTGGGGTGGACCTTGATAATCTATGTGTCGAT
GATACTTAGTCGTGGGATTAAGCTCCTTCCCTCACAACGCTTACGAGGTA
TCTAAACAGAGGTTGCATATGCCGGGGTGGAAAGGAAAACCTATGTGTCC
ATGTGTTGATGTGAGTATGTGTATTTTTGTGTTGTTTTTATCCGTCTCTA
CGGCGATTTGTTTCGGCGACACACCAGAAGAGAAATCAAGTCGACAAGGA
CAGACGCGCCCCCACACGTGTACACGGAAACCGTCGGTCCCACACTAGGC
ACCCATCACTTCCCGACTGGATAAATGGTGGGCACCCTACCTTATGGCAC
CCTCCCCGCTCGAGACTGACCATAGCTGTCATGTCCACTAATATCTGCCC
TGAAGATTGATTGAATGCTTGAGTCATTCTTTCATTTTAATTTTTTAAAA
TTTTTAATCGGACCACATATCTTGTCTTGGTGTTTCTTTTAACGCAGATG
TGGTCAACGTGGTCAACGACAATAAGGTGGAGACGGGGGTGTGTCGGGCG
GCCGGGGCCGGGGGTCGAAGGGGAGGGCGAGGGCAACGCAACCCCAAGAA
CATCCTGGCGGTGGTGGCTGGCGAGGCTTCGCTGGGAATTCCGGAGACCT
TCAAAGAACTTGTGCGCTGTGTGTTTTTTGTGTCGTATATTTGATTCGGT
GGGGGTGGGGGTGAGTGAGGGCGGTCGTTCGTTTTGTTGTCGATTGCATG
TATTGCCATACTCTACTCTAATCTTGTGTCGTTTATTGTAATCCTTAAAG
GCATGCCCACATACACACCCACTTTACTACATATATATCTGTGTACATAC
ACGTATAGGTACTTCACGTAAACGTTATTTCATATCCACCAGGCTGCCTG
CCGCGTTTTTTGCGTATATATTTTCGTTTTCGGTCAAGTCCTTCTATCTG
CTGTGTGCCAATCTGTTACGTGTGATGTACTCCCGAGCTGTAGATTGGGC
GTCCATGTGCCAAACGACGGGTGCCCGGACTTCGCGTTCAGAAGGAATAA
TAAATGGTTCCGTTGACAACGATTTAAGCTGACGAGAAGAATCGTGACTT
GCCTCCCATGAAGCCAAGTGTACTTCTCCCTCCCTCCCCTCTGTTTGTGG
TGCCTAAAGCAGTGGTTCCATGTGTAGGTAGCATGCGCATTACATTCCCG
TAGCTCCGCTAAGTTCAAGCTGCAATGCTCACATGACCTGCAAAGGACGT
AATTACCAACCCTGCAGCCACACCCTTACCCTCAGGGCCTACCTTTTGCG
TGCGGAGTGTTTCCGGAACCGTGCTGAGGGAATTTTAGTTGTTTTCAACA
CATTCGATAAGCTCAGACCCGCGGTTTTGTTACCATACCATGGAGAGGAT
AATAGCGGTGCGGTTTGTATTGAATAGTTGTGTATTAGTACAGGGATACT
GGTCGCGGAAAATGGTTTGAATCTTGGCTTCGAAACTGAGAGGTGATAAC
CTCAATCCAGTTACTAAAGAAGCAATCAGTGATGGCCATCAGTATGGTAA
CTTTGTGCAAACTTGTGTTGGGAAGAGTTTCGGTTCTAAGCCATGACTCG
CTATCCTTCCCTAGGTCAAGGGCTGGCACAGCCGCCGGAGTGCCGTGTAC
TTGATGTAGAAGTGGTGCAGTTGACAGACTGCGGTACACACATTGGGTCC
CTCGAGCAGTGGAATTCAACTGCACAGCGCGAACAGCAAAATGCCGTAGA
CAGAGAGTACTACTGTATCCAGTGCAAACAGATTGGTCAACTGCGACATG
CAGCACAACATTTGCGGCACGCAAGAGCTGATGAGCACCCGTATATTATC
CCGAGATTCCCTTAACAAACGATATCTGCTGCGTATGTGACGTCCTGCTG
TGAATAACGGTACGCATAGGCTCAACAGCAGGCGGTCAGCCATAGTCAGT
CGGGACATACAGCATGACAGCATGATTGATATCTATCGTAGTTGGTAATT
AGGCGTTAGGCTTCCTGGAACAAAGGTGTTTCTTCCTGTAATTTTTTTTT
TTCACCAACGAAGCCTAAGAAAAGACAAGACACGGATGGTTCGTCAGGAG
TTTACTAGCCAAGGCATCGAACGTGAGTACCTCCCCCCGTGCGCTGTTCC
GTACCTTGGTGTTCCTTTCTTACAGGTGTTGGAGCAATCGTCGGCGATTG
TTGAACTCCTTGATGCTGACCCATCAGTACTCGAGAACCGTCTGTCGGTA
TTGTTGAGGATAGAGGGTGCCGTGGAAACTCCGCAGAAGCTTGACTTTAT
CCTCTCGTCCATGGAATCGAGAGCTGGTGGAGACAAGGGTCTGGAGCTCA
GCATCAATCGCATGGCCGAGCCGTGAGTTTATGGGCGGGCGGGTGGTGGG
TTATCGTGGGTGTGAGACTTGATGTAGTGTAGTGCTTGATGTTCAAGATG
CGATGCTCCAAATGTGATGTGGTGTTTCCCTTCTTTTTGGTGCATCTCAG
ACCAATTCTTATGGCAGGCAGGTATATGTGATGTGTGTGATTGCGACTGG
GGGTCGGAGAAATCAACGTACTGTAAAAAATAGAGAGTATAGAAAGGTCA
GTTGCTGTTATCGTTGGAGGATGAGGATGAGAACGTTGTTCACAGTCGGA
ACGTTTTTTTCCTTCCAAAGATACAATTGACGACAACCAACACTTGGTGC
AATACGTCACACCCACAAGGGCAGTATCAATCGTTGTCTCTCTCGCTCCT
GCCCCTGCTTGACCTATGCGTGCTAGGACCTTTTACCTGTTGGCTACAGT
TTTCAATTTTACCGTGCTGTATTTTTCTTTTCATGATTTGCCGTTGGCGA
TAGGCACGAAATGGTGGATATGTCCATGCAGCAGCTTGCCGCGGCGCCGC
CGCGTGTGATGAGTCAGGTGCCGGAGATCAAGTACGCCAACGAGCCAGGC
AAGTTAGCCACAATGTTGATGAGAGAAGAAGCATGCCCTTGCGTTTGCAC
ACAGCACCAAGTTCAGCGGATGAAGCCTCAGCAGCAGGATACACAACGCA
AGACAGGGAAGAATTGGGTTCTTGGAATGCTTGTGTATGTACTTGTCACA
CTTCCTGTCTTACCTATGTATCACACAGCAGTCGTGCCGTTAGGAGCGGT
GCCCTATGACTATTGGGACTTGACAGAGGAGAGATTTCTAATGTGATCGT
GACGAGGAGAAATGAAACGCTCATTTGGCGCCACGAGCATTAGGAATACG
TTTTTCCAGGGGGACTGACCGTGGTGCCCATCCCCGTTTATCATATTGGA
CGGATTTATAGTACCGTTATTGCATTTTCGCTCATGCGGTAGCGCCTGCT
ACTTTCTTTTTTTTTATGTGTATGTGTGTGTGTGCTAACCAATACCAAAA
TCCAAAATTAAAACCAAAAATACAGGGGAAGGCGACGGACCTCTGCGTGA
GCTGATCGACATCCTGTCTGAGGTGTTCAAGACTCGCCGCACGCCCACCG
CCGACCAGGCTTCATCAACACCGCCGCCGCCAACACCTTCACACCACCAA
TACGGCAAAACGCCCTCGTCTTTTGACCCTTCCCCAACCTCACCCGCCGA
CACTACCGCTGCTTCTCTCGCTACCGCTACCAACAAGGCCTCGCCCGGCT
CACTGCTTAATCCTGACGCCTCCCCCTTTGCGTCGCCAGGGCTCCCGCTG
CCGCCGCCGCCTCCGTTGTCTCCTAAGTCCGTGCTTAAGGCCGAAGCACC
GCCTTTCACCCCGATGGCCACAAGCGGTTCTTTTAGTAACATCAATAGCA
ACAATAATAGGGGAGGGCATAGGATGAGGGGTGGTGGGGGGGGTGGTGGC
GGGTTATCTCGTTCGGCGGCTGCGCCTGGGGCTGCGACCTCGGGGTTTTG
GCAGTCGTTCCCGCTGTTTAGGGTGTACGAGCCGGATCCTGCGGCAGTTA
TGCCGCGCCCGATGAAGATGGGAGAGAATTGTGGCACAGGAACGCGGTCT
GCGGCGGAGAGGGAGGAAGCGGAAAGTCGACTTAGGGTCAGTAAAGTGCA
GCTTTTCTTGTTTTTTTTGTTTTTGTTTTCCAAGTTTTGGGCTTTTTAAA
AACTGAAACATTCATGTCAATCGGCGGTATTAAACTGATCCACAATCCTT
TTTTGTATGCACATTTTTCGAAGTCCGTTGTACACTGTCGTACTATTGTT
GACTGCTATTAGATAGGGGTTGAAGAAGTTATCTTCGCATTCATGAAAAC
GTGCAGATTTTTACTACTTTGCAGCAATTGAACCGATTTTTTGGTTATGC
TTCTGAGGTCTCAGGAGTAATTCGGACACGCTTGTTGGTATCTTTATACT
TTTTAATAAATGATGAAAAATATTTGTGTGATGAACAGAGTTGATAAGCC
CTAATTATCCGATCAGCACTACAAGCGAACCCATGACTAGCGGTATTTGA
AACTCTTTTTTCTGCTGTTGAAAGTTGCGGCTTATGCACTTCTTGAATCT
AGTAGATAGTCCTTCCATTTCAAAACCGTACCTGATTGGCTGTGTTTTGT
TCTGTGCCGCAGTTTTTCCGAGCTGCCGGGCGTGTGATCGCGCTTAGTCT
GGTGACGGGAGCACCCCTGGGCCTAGTTCTGCCGGAAGCAGCGTGGGCTG
TACTATTGGTGAGAGGACATAACTGTAACAAATCGTGAATAAATAGCGTA
ACTGGTAACCATCTCTCGCTCTCCCTCTCTTGCTCTCTTGCTCTCTCTCT
CTCTCTCTCAACAATTTTTCAGTTCCAAGCCCTTTGTGCTCCGTCGTATG
TTCGTGCTCGGTCGTTGTTTTTTTTCCTGTCGGTTTTCGTGCAGGGCTTG
AACCCCACCTGGGAAGACAACTGCGGCCGCGACACGGAATACAAGAACTC
CATGAAGGCGGTGCTGGAACATGACTTTGGTGTGGGGGAGGACGGCAATG
GCCTGGAGCTGTATTTTTCGGTCTCTGAAAAGGGGCCCGATGGACAAGTG
AGAAAGAAATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig11290:2298..8059+

>mRNA_H-paniculata_contig11290.827.1 ID=mRNA_H-paniculata_contig11290.827.1|Name=mRNA_H-paniculata_contig11290.827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2880bp|location=Sequence derived from alignment at H-paniculata_contig11290:2298..8059+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCATCGAGGGCGTAGTGACCACTTCTGAAGGAGATCGCTTCGGAGCGCT
TATTCGGGGTTATCTGGCGTACCTGCACCTAATGGACGGCAGCGCACAAC
ACTACTGTGGTCATCGAGGGCGTAGTGACCACTTCTGAAGGAGATCGCTT
CGGAGCGCTTATTCGGGGTTATCTGGCGTACCTGCACCTAATGGACGGCA
GCGCACAACACTACTGTGATGTGGTCAACGTGGTCAACGACAATAAGGTG
GAGACGGGGGTGTGTCGGGCGGCCGGGGCCGGGGGTCGAAGGGGAGGGCG
AGGGCAACGCAACCCCAAGAACATCCTGGCGGTGGTGGCTGGCGAGGCTT
CGCTGGGAATTCCGGAGACCTTCAAAGAACTTATGTGGTCAACGTGGTCA
ACGACAATAAGGTGGAGACGGGGGTGTGTCGGGCGGCCGGGGCCGGGGGT
CGAAGGGGAGGGCGAGGGCAACGCAACCCCAAGAACATCCTGGCGGTGGT
GGCTGGCGAGGCTTCGCTGGGAATTCCGGAGACCTTCAAAGAACTTGTGT
TGGAGCAATCGTCGGCGATTGTTGAACTCCTTGATGCTGACCCATCAGTA
CTCGAGAACCGTCTGTCGGTATTGTTGAGGATAGAGGGTGCCGTGGAAAC
TCCGCAGAAGCTTGACTTTATCCTCTCGTCCATGGAATCGAGAGCTGGTG
GAGACAAGGGTCTGGAGCTCAGCATCAATCGCATGGCCGAGCCGTGTTGG
AGCAATCGTCGGCGATTGTTGAACTCCTTGATGCTGACCCATCAGTACTC
GAGAACCGTCTGTCGGTATTGTTGAGGATAGAGGGTGCCGTGGAAACTCC
GCAGAAGCTTGACTTTATCCTCTCGTCCATGGAATCGAGAGCTGGTGGAG
ACAAGGGTCTGGAGCTCAGCATCAATCGCATGGCCGAGCCGCACGAAATG
GTGGATATGTCCATGCAGCAGCTTGCCGCGGCGCCGCCGCGTGTGATGAG
TCAGGTGCCGGAGATCAAGTACGCCAACGAGCCAGGCACGAAATGGTGGA
TATGTCCATGCAGCAGCTTGCCGCGGCGCCGCCGCGTGTGATGAGTCAGG
TGCCGGAGATCAAGTACGCCAACGAGCCAGGGGAAGGCGACGGACCTCTG
CGTGAGCTGATCGACATCCTGTCTGAGGTGTTCAAGACTCGCCGCACGCC
CACCGCCGACCAGGCTTCATCAACACCGCCGCCGCCAACACCTTCACACC
ACCAATACGGCAAAACGCCCTCGTCTTTTGACCCTTCCCCAACCTCACCC
GCCGACACTACCGCTGCTTCTCTCGCTACCGCTACCAACAAGGCCTCGCC
CGGCTCACTGCTTAATCCTGACGCCTCCCCCTTTGCGTCGCCAGGGCTCC
CGCTGCCGCCGCCGCCTCCGTTGTCTCCTAAGTCCGTGCTTAAGGCCGAA
GCACCGCCTTTCACCCCGATGGCCACAAGCGGTTCTTTTAGTAACATCAA
TAGCAACAATAATAGGGGAGGGCATAGGATGAGGGGTGGTGGGGGGGGTG
GTGGCGGGTTATCTCGTTCGGCGGCTGCGCCTGGGGCTGCGACCTCGGGG
TTTTGGCAGTCGTTCCCGCTGTTTAGGGTGTACGAGCCGGATCCTGCGGC
AGTTATGCCGCGCCCGATGAAGATGGGAGAGAATTGTGGCACAGGAACGC
GGTCTGCGGCGGAGAGGGAGGAAGCGGAAAGTCGACTTAGGGGGAAGGCG
ACGGACCTCTGCGTGAGCTGATCGACATCCTGTCTGAGGTGTTCAAGACT
CGCCGCACGCCCACCGCCGACCAGGCTTCATCAACACCGCCGCCGCCAAC
ACCTTCACACCACCAATACGGCAAAACGCCCTCGTCTTTTGACCCTTCCC
CAACCTCACCCGCCGACACTACCGCTGCTTCTCTCGCTACCGCTACCAAC
AAGGCCTCGCCCGGCTCACTGCTTAATCCTGACGCCTCCCCCTTTGCGTC
GCCAGGGCTCCCGCTGCCGCCGCCGCCTCCGTTGTCTCCTAAGTCCGTGC
TTAAGGCCGAAGCACCGCCTTTCACCCCGATGGCCACAAGCGGTTCTTTT
AGTAACATCAATAGCAACAATAATAGGGGAGGGCATAGGATGAGGGGTGG
TGGGGGGGGTGGTGGCGGGTTATCTCGTTCGGCGGCTGCGCCTGGGGCTG
CGACCTCGGGGTTTTGGCAGTCGTTCCCGCTGTTTAGGGTGTACGAGCCG
GATCCTGCGGCAGTTATGCCGCGCCCGATGAAGATGGGAGAGAATTGTGG
CACAGGAACGCGGTCTGCGGCGGAGAGGGAGGAAGCGGAAAGTCGACTTA
GGTTTTTCCGAGCTGCCGGGCGTGTGATCGCGCTTAGTCTGGTGACGGGA
GCACCCCTGGGCCTAGTTCTGCCGGAAGCAGCGTGGGCTGTACTATTGTT
TTTCCGAGCTGCCGGGCGTGTGATCGCGCTTAGTCTGGTGACGGGAGCAC
CCCTGGGCCTAGTTCTGCCGGAAGCAGCGTGGGCTGTACTATTGGGCTTG
AACCCCACCTGGGAAGACAACTGCGGCCGCGACACGGAATACAAGAACTC
CATGAAGGCGGTGCTGGAACATGACTTTGGTGTGGGGGAGGACGGCAATG
GCCTGGAGCTGTATTTTTCGGTCTCTGAAAAGGGGCCCGATGGACAAGTG
AGAAAGAAATGAGGCTTGAACCCCACCTGGGAAGACAACTGCGGCCGCGA
CACGGAATACAAGAACTCCATGAAGGCGGTGCTGGAACATGACTTTGGTG
TGGGGGAGGACGGCAATGGCCTGGAGCTGTATTTTTCGGTCTCTGAAAAG
GGGCCCGATGGACAAGTGAGAAAGAAATGA
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