prot_H-paniculata_contig3051.8266.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3051.8266.1
Unique Nameprot_H-paniculata_contig3051.8266.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length238
Homology
BLAST of mRNA_H-paniculata_contig3051.8266.1 vs. uniprot
Match: D8LCB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB6_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 3.510e-43
Identity = 96/226 (42.48%), Postives = 135/226 (59.73%), Query Frame = 0
Query:    1 RSTWCVLRDAGARAGMVRVLRPRPWGDKDDLLGGARVAVNSEVLKLMSQSTQHCMKGILEQLATVAWQRRGGLSRDILTGLEARMEDDRLPPPAVELRRGLVPRIPTVATRRTGAGGVFTSETVVWDKKQPEHDDPHECLKRDERRHRRECTEREARWATEVF-TEVSAEEENNRKRNRGKRSGRA------DDLLSLSKTGWLSREQMAANEFARRVCLETGVGL 219
            R  WC LRDAG RAGM RVL+ RPWG+  + L G + A  S+VLKLMS + Q+ +K +L++LA VA+QR+GGLS ++L+G+E+R+ D  +  P  ELR+ LVPR+P V                         D P   L+R E  HR+EC ERE RW  E+  T  +AEE   R   RG +          +D+ + +K+GWLS+EQ+A +EFARRV ++ G+G+
Sbjct:  250 RHAWCCLRDAGERAGMRRVLKERPWGNPREPLEGGKEAAGSDVLKLMSLAAQYYLKNMLDELAVVAYQRKGGLSAELLSGVESRLRDPSVKDPKAELRQSLVPRLPRV------------------------QDLPRVTLERTEEAHRKECEEREERWDVELADTLTTAEEVRKRLIRRGTKKLPPGSFKWWEDMETRAKSGWLSKEQLAGSEFARRVAVKHGIGV 451          
BLAST of mRNA_H-paniculata_contig3051.8266.1 vs. uniprot
Match: A0A6H5KTJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ7_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 6.430e-42
Identity = 94/226 (41.59%), Postives = 135/226 (59.73%), Query Frame = 0
Query:    1 RSTWCVLRDAGARAGMVRVLRPRPWGDKDDLLGGARVAVNSEVLKLMSQSTQHCMKGILEQLATVAWQRRGGLSRDILTGLEARMEDDRLPPPAVELRRGLVPRIPTVATRRTGAGGVFTSETVVWDKKQPEHDDPHECLKRDERRHRRECTEREARWATEVF-TEVSAEEENNRKRNRGKRSGRA------DDLLSLSKTGWLSREQMAANEFARRVCLETGVGL 219
            R  WC LRDAG +AGM RVL+ RPWG+  + L G + A  S+VLKLMS + Q+ +K IL++LA VA+QR+GGLS ++L+G+E+R+ D  +  P  ELR+ LVPR+P+V                           P   L++ E  HR+EC ERE RW  E+  T  +AEE   R   RG +          +D+ + +K+GWLS+EQ+A +EFARRV ++ G+G+
Sbjct:  451 RHAWCCLRDAGEKAGMRRVLKERPWGNPREPLEGGKEAAGSDVLKLMSFAAQYYLKNILDELAVVAYQRKGGLSAELLSGVESRLRDPSVKDPKAELRQSLVPRLPSVRNL------------------------PRVILEKTEEAHRKECEEREERWDVELADTLTTAEEVRKRLIRRGTKKLPPGSFKWWEDMETRAKSGWLSKEQLAGSEFARRVAVKHGIGV 652          
BLAST of mRNA_H-paniculata_contig3051.8266.1 vs. uniprot
Match: A0A6H5K4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T0_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 6.310e-41
Identity = 107/247 (43.32%), Postives = 137/247 (55.47%), Query Frame = 0
Query:    1 RSTWCVLRDAGARAGMVRVLRPRPWGDKDDLLGGARVAVNSEVLKLMSQSTQHCMKGILEQLATVAWQRRGGLSRDILTGLEARMEDDRLPPPAVELRRGLVPRIPTVATRRTGAGGVFTSETVVWDKKQPEHDDPHECLKRD--ERRHRRECTEREARWATEVFTEVSAEEENNRKRNRGKRSGRA-------DDLLSLSKTGWLSREQMAANEFARRVCLETGVGLSPAASVEWKKRRKKSADVA 238
            RS WC LRDAGARAGM +VL+PRPWGD     GG + A NS+VL+         +K +L +L+ VA+QRRGGLS ++L GLE RMED R P  A+ L  GLVPR      RR   GG                            E  HRR C +REA W   V   ++A     + RN+ +    A       + L + S++GWLSREQ+AANEFARRV ++ GVGLS  AS EW+ R+K+ A+ A
Sbjct:  343 RSAWCGLRDAGARAGMRKVLQPRPWGDALAPSGGGQEAANSQVLEAY-------LKRVLTELSVVAYQRRGGLSEELLQGLEERMEDPRSPGSALILYEGLVPRF-----RRYQPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAHRRSCLKREAGWEARVAEVMAAAHGGRKSRNKRRSLTNAPSRRVGVESLSAWSESGWLSREQVAANEFARRVGVKRGVGLSMPASAEWR-RKKRMAEAA 576          
BLAST of mRNA_H-paniculata_contig3051.8266.1 vs. uniprot
Match: D7FYX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX3_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 1.190e-34
Identity = 79/168 (47.02%), Postives = 102/168 (60.71%), Query Frame = 0
Query:    1 RSTWCVLRDAGARAGMVRVLRPRPWGDKDDLLGGARVAVNSEVLKLMSQSTQHCMKGILEQLATVAWQRRGGLSRDILTGLEARMEDDRLPPPAVELRRGLVPRIPTVATRRTGAGGVFTSETVVWDKKQPEHDDPHECLKRDERRHRRECTEREARWATEVFTEVSA 168
            RS WC LR+AGARAG+ +VL+PRPWGD     GG + A NS+VL+L+S +TQ  +K +L +L+ VA+QRRGGLS ++L GLE RMED R P  A+ L  GLVPR P      +G                   +DP E L+R+E  HRR C EREA W   V   ++A
Sbjct:  378 RSAWCGLRNAGARAGLRKVLQPRPWGDPLAPSGGGQEAANSQVLELISAATQAYLKRVLTELSVVAYQRRGGLSEELLQGLEERMEDPRSPGSALVLYEGLVPRFPRY---ESGGSXXXXXXXXXXXXXXXXXEDPREVLRREEGAHRRSCLEREAGWEARVAEVMAA 542          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3051.8266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LCB6_ECTSI3.510e-4342.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTJ7_9PHAE6.430e-4241.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4T0_9PHAE6.310e-4143.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYX3_ECTSI1.190e-3447.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3051contigH-paniculata_contig3051:15860..18965 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3051.8266.1mRNA_H-paniculata_contig3051.8266.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3051 15860..18965 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3051.8266.1 ID=prot_H-paniculata_contig3051.8266.1|Name=mRNA_H-paniculata_contig3051.8266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp
RSTWCVLRDAGARAGMVRVLRPRPWGDKDDLLGGARVAVNSEVLKLMSQS
TQHCMKGILEQLATVAWQRRGGLSRDILTGLEARMEDDRLPPPAVELRRG
LVPRIPTVATRRTGAGGVFTSETVVWDKKQPEHDDPHECLKRDERRHRRE
CTEREARWATEVFTEVSAEEENNRKRNRGKRSGRADDLLSLSKTGWLSRE
QMAANEFARRVCLETGVGLSPAASVEWKKRRKKSADVA
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