prot_H-paniculata_contig3051.8265.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3051.8265.1
Unique Nameprot_H-paniculata_contig3051.8265.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length94
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3051.8265.1 vs. uniprot
Match: D7FYX5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYX5_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 3.890e-43
Identity = 78/93 (83.87%), Postives = 85/93 (91.40%), Query Frame = 0 
Query:    1 MTTTSEITSASGTETKLRVAKTQVRKSALGRLLKPLFNLDEVEFPTETLLTPLREASNEVMMTTTYLDGLLRVSRNEQGQLFVFVREDEGDLR 93
            MTTTSEIT A+GTETKLRVAKTQVRKSALGRLLKPLFNLD +EF T+ LLTPL+E S EV MTTTYLDGLLRVSRNEQGQ+FVF RED+G+LR
Sbjct:  266 MTTTSEITDAAGTETKLRVAKTQVRKSALGRLLKPLFNLDNIEFQTDNLLTPLKEGSTEVSMTTTYLDGLLRVSRNEQGQVFVFAREDDGELR 358
[Close]
BLAST of mRNA_H-paniculata_contig3051.8265.1 vs. uniprot
Match: A0A7S4FYH2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FYH2_9EUGL)

HSP 1 Score: 57.0 bits (136), Expect = 1.580e-7
Identity = 34/86 (39.53%), Postives = 56/86 (65.12%), Query Frame = 0 
Query:    1 MTTTSEITSASGTETKLRVAKTQVRKSALGRLLKPLFNLDEVEFPTETLLTPLREASNEVMMTTTYLDGLLRVSRNEQGQLFVFVR 86
            M TTS I   + ++  L+V +T+VR++ L     PL++   + FP+   L   R+ ++EV+MTT Y+D L+R+S+N+QGQ FV+ R
Sbjct:  190 MITTSAIVDRNRSQVTLKVDETKVRETTL-----PLWD-KTLPFPSGVALELARQGASEVVMTTLYIDELIRISKNDQGQTFVWTR 269
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3051.8265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYX5_ECTSI3.890e-4383.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4FYH2_9EUGL1.580e-739.53Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 5..84
e-value: 6.1E-6
score: 26.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3051contigH-paniculata_contig3051:3005..8124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3051.8265.1mRNA_H-paniculata_contig3051.8265.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3051 124..9092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3051.8265.1 ID=prot_H-paniculata_contig3051.8265.1|Name=mRNA_H-paniculata_contig3051.8265.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=94bp
MTTTSEITSASGTETKLRVAKTQVRKSALGRLLKPLFNLDEVEFPTETLL
TPLREASNEVMMTTTYLDGLLRVSRNEQGQLFVFVREDEGDLR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom