mRNA_H-paniculata_contig305.8259.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig305.8259.1 vs. uniprot
Match: D7FJ16_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ16_ECTSI) HSP 1 Score: 140 bits (353), Expect = 1.300e-37 Identity = 69/99 (69.70%), Postives = 84/99 (84.85%), Query Frame = 1
Query: 1 SVDLFENKDLGLVVRCVFALGSTVQVACPEFQGPHLGAKISQTNKRVFNDKQKQQARINSSFSKMNMGSAHSMERAQVLSKEGITFGAENAGPGDTTVL 297
+VDL+E KD+GLVVRC+FALGS VQ CPE+ GP LGAK Q NKR+FN++QKQQA++N+SFSK+ MGSAHSMER+Q+ SK GI FGAENAG GDTT +
Sbjct: 107 TVDLYEGKDIGLVVRCIFALGSAVQGTCPEYTGPTLGAKPHQENKRIFNEEQKQQAKVNASFSKLGMGSAHSMERSQI-SKPGICFGAENAGTGDTTTV 204
BLAST of mRNA_H-paniculata_contig305.8259.1 vs. uniprot
Match: A0A835ZHQ8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ8_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.050e-24 Identity = 56/97 (57.73%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 1 SVDLFENKDLGLVVRCVFALGSTVQVACPEFQGPHLGAKISQTNKRVFNDKQKQQARINSSFSKMNMGSAHSMERAQVLSKEGITFGAENAGPGDTT 291
+VDLFE KD+GLV+RC+FALGS VQ + PEF GPHLGAK NKR F +Q +QAR++++ +K GSA MER ++ K GIT GAE AG GDT+
Sbjct: 104 TVDLFEEKDVGLVIRCLFALGSAVQSSTPEFAGPHLGAKPHTANKREFTAEQMRQARLDTTMTKAMQGSAAVMERLPIV-KTGITAGAEYAGIGDTS 199
BLAST of mRNA_H-paniculata_contig305.8259.1 vs. uniprot
Match: A0A836CGB8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB8_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.930e-23 Identity = 52/96 (54.17%), Postives = 67/96 (69.79%), Query Frame = 1
Query: 1 SVDLFENKDLGLVVRCVFALGSTVQVACPEFQGPHLGAKISQTNKRVFNDKQKQQARINSSFSKMNMGSAHSMERAQVLSKEGITFGAENAGPGDT 288
+VDL+E KD+ LV++C+FALGST+Q + PEF GPHLGAK+ NKR F +Q +AR+ + +K GSA MER V K GIT GAE AG GD+
Sbjct: 105 TVDLYEEKDISLVIKCLFALGSTIQSSVPEFHGPHLGAKMHTANKREFTAEQMAKARLGGAITKQTQGSAAVMERLHVT-KGGITMGAEYAGTGDS 199
BLAST of mRNA_H-paniculata_contig305.8259.1 vs. uniprot
Match: A0A6H5L3X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X7_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 1.210e-20 Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 1
Query: 1 SVDLFENKDLGLVVRCVFALGSTVQVACPEFQGPHLGAKISQTNKRVFNDKQKQQARINSSFSKMNM--GSAHSMERAQVLSKEGITFGAENAGPGD 285
+VDL+E KDLGLVVRC+ ALG TVQ +CPE+ GP LG K ++ NKR + ++Q+QQ NSS + N+ GS+ +MERA +L K G TFGA +G GD
Sbjct: 442 TVDLYEGKDLGLVVRCLHALGQTVQNSCPEYNGPRLGIKQTEANKREWTEEQQQQQLRNSSGAMSNLLAGSSKTMERATIL-KTGATFGAAQSGTGD 537
BLAST of mRNA_H-paniculata_contig305.8259.1 vs. uniprot
Match: A0A7S2XUQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUQ6_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.120e-17 Identity = 48/100 (48.00%), Postives = 68/100 (68.00%), Query Frame = 1
Query: 1 SVDLFENKDLGLVVRCVFALGSTVQVACPEFQGPHLGAKISQTNKRVFNDKQKQQARIN--SSFSKMNMGSAHSMERAQVLSKEGITFGAENAGPGDTTV 294
+VDL+E KDL +VV+C+ ALG ++Q F+GPHLGA+++Q N+R F ++Q++QAR+ S+ SK G ER V + + ITFGAE AG GDT V
Sbjct: 42 TVDLYEMKDLAVVVQCIHALGRSLQ-GVEGFEGPHLGARMAQKNERTFTEEQQRQARLALASNPSKQTSGGYGHQERLDVSTAQNITFGAEKAGLGDTAV 140
BLAST of mRNA_H-paniculata_contig305.8259.1 vs. uniprot
Match: K3WZS5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZS5_GLOUD) HSP 1 Score: 82.8 bits (203), Expect = 2.080e-15 Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 1 SVDLFENKDLGLVVRCVFALGSTVQVACPEFQGPHLGAKISQTNKRVFNDKQKQQARINSSFSKMNMGSAHSMERAQVLSKEGITFGAENA 273
+VDLFE KDLG VVRC+FALG VQ P+F GP LG K S N+R F +++ +AR S +N+GS +MER V +TFGAE A
Sbjct: 110 TVDLFELKDLGHVVRCIFALGRAVQKTYPDFNGPTLGVKESVKNERTFTEEKLNEARAAPSL--VNLGSFRTMERLDVSRGNSVTFGAEAA 198
BLAST of mRNA_H-paniculata_contig305.8259.1 vs. uniprot
Match: A0A8K1CMC3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMC3_PYTOL) HSP 1 Score: 82.0 bits (201), Expect = 4.080e-15 Identity = 46/89 (51.69%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 1 SVDLFENKDLGLVVRCVFALGSTVQVACPEFQGPHLGAKISQTNKRVFNDKQKQQARINSSFSKMNMGSAHSMERAQVLSKEGITFGAE 267
+VDLFE KDLGLVVRC+ ALG Q P+F+GP LG K S N+R F+++Q +AR SF + GS +MERA V +TFGAE
Sbjct: 109 TVDLFELKDLGLVVRCIHALGRATQKNYPDFKGPTLGVKESSKNERQFSEEQLAEARNAPSF--IAQGSVRTMERADVRKANDLTFGAE 195
BLAST of mRNA_H-paniculata_contig305.8259.1 vs. uniprot
Match: D7FNP0_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP0_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 1.990e-13 Identity = 51/137 (37.23%), Postives = 70/137 (51.09%), Query Frame = 1
Query: 1 SVDLFENKDLGLVVRCVF----------------------------------------ALGSTVQVACPEFQGPHLGAKISQTNKRVFNDKQKQQARINSSFSKMNM--GSAHSMERAQVLSKEGITFGAENAGPGD 285
+VDL+E KD+GLVV+C+ ALG TVQ +CPE+ GP LG K ++ NKR + ++Q+QQ NSS + N+ GS+ +MERA V+ K G TFGA +G GD
Sbjct: 97 TVDLYEGKDVGLVVKCLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALGQTVQNSCPEYNGPRLGIKQTEANKREWTEEQQQQQLRNSSGAMSNLLAGSSKTMERATVI-KTGATFGAAQSGTGD 232
BLAST of mRNA_H-paniculata_contig305.8259.1 vs. uniprot
Match: A0A7S3Y6D1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6D1_HETAK) HSP 1 Score: 74.7 bits (182), Expect = 2.520e-13 Identity = 41/107 (38.32%), Postives = 67/107 (62.62%), Query Frame = 1
Query: 1 SVDLFENKDLGLVVRCVFALGSTVQVACPEFQGPHLGAKISQTNKRVFNDKQKQQARINSSFSKMNMGSAHSMERAQVLSKEG-------ITFGAENAGPGDTTVLA 300
+ DL+E K+ LVV+ ++ALG T+QV PEF GP LG +++Q N+R F+ +Q Q+++ + S + GS + A + + +TFGAE+AG GD++VL+
Sbjct: 89 TADLWEEKEPRLVVKTIYALGRTIQVTVPEFNGPTLGPRLAQRNERTFSPEQLQESQRKAVMSGVTAGSWGTQGMASLRASSARPHQAGSVTFGAEHAGIGDSSVLS 195
BLAST of mRNA_H-paniculata_contig305.8259.1 vs. uniprot
Match: A0A5D6XYZ9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYZ9_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 3.880e-13 Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 1 SVDLFENKDLGLVVRCVFALGSTVQVACPEFQGPHLGAKISQTNKRVFNDKQKQQARINSSFSKMNMGSAHSMERAQVLSKEGITFGAE 267
+VDLFE KDLG VVRC+FALG VQ P+F GP LG K + N+R F +++ +AR + +N+GS +M R + +TFGAE
Sbjct: 110 TVDLFELKDLGHVVRCIFALGRAVQKNYPDFAGPALGVKEAVKNERTFTEEKLNEARNAPAL--VNLGSLRTMARLDIARTNSVTFGAE 196 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig305.8259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig305.8259.1 >prot_H-paniculata_contig305.8259.1 ID=prot_H-paniculata_contig305.8259.1|Name=mRNA_H-paniculata_contig305.8259.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=165bp SVDLFENKDLGLVVRCVFALGSTVQVACPEFQGPHLGAKISQTNKRVFNDback to top mRNA from alignment at H-paniculata_contig305:180..1811+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig305.8259.1 ID=mRNA_H-paniculata_contig305.8259.1|Name=mRNA_H-paniculata_contig305.8259.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1632bp|location=Sequence derived from alignment at H-paniculata_contig305:180..1811+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig305:180..1811+ >mRNA_H-paniculata_contig305.8259.1 ID=mRNA_H-paniculata_contig305.8259.1|Name=mRNA_H-paniculata_contig305.8259.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=990bp|location=Sequence derived from alignment at H-paniculata_contig305:180..1811+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |