prot_H-paniculata_contig30488.8258.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig30488.8258.1
Unique Name	prot_H-paniculata_contig30488.8258.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	122

Homology

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BLAST of mRNA_H-paniculata_contig30488.8258.1 vs. uniprot
Match: D7G647_ECTSI (RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G647_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 2.480e-74
Identity = 105/122 (86.07%), Postives = 117/122 (95.90%), Query Frame = 0

Query:    1 QVIILGDSAVGKSKLMERYLMDDYNPRQLSTFALTLFRKNARLGDGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLTDWYGELRQYCEGVPCLLVANKIDVDYNVSR 122
            +VI+LGDSAVGKSKL+ERYLMD+YNPRQLSTFALTLFRKNA+L DG EVKVDFWDTAGQERFSSMHPSYYYRAHACI+VFDVTRKATYK+L+DWYGELRQY E +PCLL+ANKIDVDY V++
Sbjct:   25 KVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNAKLDDGVEVKVDFWDTAGQERFSSMHPSYYYRAHACIMVFDVTRKATYKNLSDWYGELRQYSESIPCLLIANKIDVDYQVTK 146

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BLAST of mRNA_H-paniculata_contig30488.8258.1 vs. uniprot
Match: A0A835ZG89_9STRA (RTW, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG89_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.340e-70
Identity = 100/122 (81.97%), Postives = 113/122 (92.62%), Query Frame = 0

Query:    1 QVIILGDSAVGKSKLMERYLMDDYNPRQLSTFALTLFRKNARLGDGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLTDWYGELRQYCEGVPCLLVANKIDVDYNVSR 122
            +VI+LGDSAVGKSKL+ERYLMD+Y+PRQLSTFALTLFRKNA L DG    VDFWDTAGQERF+SMHPSYYYRAHACI+VFDVTRKATYK+L  WYGELRQ+CE +PC+LVANKIDVDYNV++
Sbjct:   21 KVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTK 142

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BLAST of mRNA_H-paniculata_contig30488.8258.1 vs. uniprot
Match: A0A125SEA6_9STRA (RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A125SEA6_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.010e-63
Identity = 90/122 (73.77%), Postives = 107/122 (87.70%), Query Frame = 0

Query:    1 QVIILGDSAVGKSKLMERYLMDDYNPRQLSTFALTLFRKNARLGDGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLTDWYGELRQYCEGVPCLLVANKIDVDYNVSR 122
            ++I+LGDSAVGKSKL+ERYLMD+YNPRQLST+ALTL+RK   L +G    +D WDTAGQERF+S+HPSYYY AH CILVFDVTRK TY+ L+DWYGELRQYCE +PC+LVANKIDVDY V++
Sbjct:   35 KIILLGDSAVGKSKLVERYLMDEYNPRQLSTYALTLYRKTVVLEEGNTYDIDLWDTAGQERFNSLHPSYYYGAHCCILVFDVTRKVTYQHLSDWYGELRQYCESIPCILVANKIDVDYKVTK 156

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BLAST of mRNA_H-paniculata_contig30488.8258.1 vs. uniprot
Match: A0A2D4BD48_PYTIN (Rab family, other n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BD48_PYTIN)

HSP 1 Score: 191 bits (486), Expect = 6.990e-60
Identity = 92/126 (73.02%), Postives = 105/126 (83.33%), Query Frame = 0

Query:    1 QVIILGDSAVGKSKLMERYLMDDYNPRQLSTFALTLFRKNARLGDGAE----VKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLTDWYGELRQYCEGVPCLLVANKIDVDYNVSR 122
            +VI+LGDSAVGKSKL+ER++MD++ PRQLSTFALTLFRK   L D       VKVDFWDTAGQERFSSMHPSYYY AHACILVFDVTRK TY++L +WY ELR+YCE +PC LVANKIDVD  V+ 
Sbjct:   20 KVILLGDSAVGKSKLVERFMMDEFQPRQLSTFALTLFRKEVELEDERGKPQIVKVDFWDTAGQERFSSMHPSYYYGAHACILVFDVTRKTTYQNLANWYKELREYCENIPCFLVANKIDVDLAVTN 145

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BLAST of mRNA_H-paniculata_contig30488.8258.1 vs. uniprot
Match: T0R548_SAPDV (Rab family, other n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0R548_SAPDV)

HSP 1 Score: 190 bits (483), Expect = 1.930e-59
Identity = 87/122 (71.31%), Postives = 102/122 (83.61%), Query Frame = 0

Query:    1 QVIILGDSAVGKSKLMERYLMDDYNPRQLSTFALTLFRKNARLGDGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLTDWYGELRQYCEGVPCLLVANKIDVDYNVSR 122
            ++I+LGDSAVGKSKL+ER++M++Y PRQLSTFALTLFRK   + DG+  K+D WDTAGQERFSSMHPSYY+ A ACILVFDVTRK TY+ L DWY ELR+YCE VPC L ANKIDVD  V+ 
Sbjct:   21 KIILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEFPMDDGSTAKIDIWDTAGQERFSSMHPSYYFGASACILVFDVTRKTTYQHLADWYKELREYCENVPCFLAANKIDVDLEVTN 142

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BLAST of mRNA_H-paniculata_contig30488.8258.1 vs. uniprot
Match: H3GJM6_PHYRM (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3GJM6_PHYRM)

HSP 1 Score: 190 bits (483), Expect = 1.930e-59
Identity = 92/125 (73.60%), Postives = 107/125 (85.60%), Query Frame = 0

Query:    1 QVIILGDSAVGKSKLMERYLMDDYNPRQLSTFALTLFRKNARL-GDGAE--VKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLTDWYGELRQYCEGVPCLLVANKIDVDYNVSR 122
            +VI+LGDSAVGKSKL+ER++M++Y PRQLSTFALTLFRK   L G+  +  VKVDFWDTAGQERFSSMHPSYYY A ACILVFDVTRK TY++L +WY ELR+YCE +PC LVANKIDVD NV+ 
Sbjct:   19 KVILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEVELDGENGKRTVKVDFWDTAGQERFSSMHPSYYYGATACILVFDVTRKVTYQNLANWYKELREYCESIPCFLVANKIDVDMNVTN 143

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BLAST of mRNA_H-paniculata_contig30488.8258.1 vs. uniprot
Match: A0A7S1GDX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDX0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.100e-59
Identity = 84/122 (68.85%), Postives = 107/122 (87.70%), Query Frame = 0

Query:    1 QVIILGDSAVGKSKLMERYLMDDYNPRQLSTFALTLFRKNARLGDGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLTDWYGELRQYCEGVPCLLVANKIDVDYNVSR 122
            ++I+LGDSAVGKSKL+ERYLMDDY+PRQ ST+ALTL+R +  + DG  +++D WDTAGQERF+SMHPSYYYRAH CIL FDVTRK+TY++++ WY ELR YCE +PC++VANKIDVDY V++
Sbjct:   30 KIILLGDSAVGKSKLVERYLMDDYHPRQRSTYALTLYRHSEEV-DGKSIEIDIWDTAGQERFASMHPSYYYRAHCCILAFDVTRKSTYQNMSQWYRELRTYCESIPCIVVANKIDVDYKVTK 150

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BLAST of mRNA_H-paniculata_contig30488.8258.1 vs. uniprot
Match: A0A6G0WRD6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRD6_9STRA)

HSP 1 Score: 191 bits (484), Expect = 3.800e-59
Identity = 86/122 (70.49%), Postives = 103/122 (84.43%), Query Frame = 0

Query:    1 QVIILGDSAVGKSKLMERYLMDDYNPRQLSTFALTLFRKNARLGDGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLTDWYGELRQYCEGVPCLLVANKIDVDYNVSR 122
            ++I+LGDSAVGKSKL+ERY+M++Y PRQLSTFALTLFRK+ +L DG   K+DFWDTAGQERF+SMH SYY+ A ACILVFDVTRK TY+ L DWY ELR+YCE +PC L ANK+DVD  V+ 
Sbjct:   20 KIILLGDSAVGKSKLVERYMMNEYQPRQLSTFALTLFRKDFQLEDGTTAKIDFWDTAGQERFNSMHASYYFGASACILVFDVTRKTTYQHLADWYKELREYCESIPCFLAANKVDVDLEVTN 141

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BLAST of mRNA_H-paniculata_contig30488.8258.1 vs. uniprot
Match: A0A024TW89_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TW89_9STRA)

HSP 1 Score: 189 bits (481), Expect = 4.280e-59
Identity = 87/122 (71.31%), Postives = 103/122 (84.43%), Query Frame = 0

Query:    1 QVIILGDSAVGKSKLMERYLMDDYNPRQLSTFALTLFRKNARLGDGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLTDWYGELRQYCEGVPCLLVANKIDVDYNVSR 122
            ++I+LGDSAVGKSKL+ERY+M++Y PRQLSTFALTLFRK+  + DG  VK+DFWDTAGQERF+SMH SYY+ A ACILVFDVTRK TY+ L DWY ELR+YCE VPC L ANK+DVD  V+ 
Sbjct:   19 KIILLGDSAVGKSKLVERYMMNEYQPRQLSTFALTLFRKDFTMPDGKTVKIDFWDTAGQERFNSMHSSYYFGAAACILVFDVTRKTTYQHLADWYKELREYCETVPCFLAANKVDVDVEVTN 140

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BLAST of mRNA_H-paniculata_contig30488.8258.1 vs. uniprot
Match: A0A067CKF6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CKF6_SAPPC)

HSP 1 Score: 190 bits (483), Expect = 5.910e-59
Identity = 86/122 (70.49%), Postives = 101/122 (82.79%), Query Frame = 0

Query:    1 QVIILGDSAVGKSKLMERYLMDDYNPRQLSTFALTLFRKNARLGDGAEVKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLTDWYGELRQYCEGVPCLLVANKIDVDYNVSR 122
            ++I+LGDSAVGKSKL+ER++M++Y PRQLSTFALTLFRK   + DG   K+D WDTAGQERFSSMHPSYY+ A ACILVFDVTRK TY+ L DWY ELR+YCE +PC L ANKIDVD  V+ 
Sbjct:   21 KIILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKELAMDDGTTTKIDIWDTAGQERFSSMHPSYYFGASACILVFDVTRKTTYQHLADWYKELREYCENIPCFLAANKIDVDLEVTN 142

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig30488.8258.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig30488.8258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G647_ECTSI	2.480e-74	86.07	RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus Tax...	[more]
A0A835ZG89_9STRA	1.340e-70	81.97	RTW, ras superfamily GTPase n=1 Tax=Tribonema minu...	[more]
A0A125SEA6_9STRA	1.010e-63	73.77	RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 R...	[more]
A0A2D4BD48_PYTIN	6.990e-60	73.02	Rab family, other n=1 Tax=Pythium insidiosum TaxID...	[more]
T0R548_SAPDV	1.930e-59	71.31	Rab family, other n=2 Tax=Saprolegniaceae TaxID=47...	[more]
H3GJM6_PHYRM	1.930e-59	73.60	Uncharacterized protein n=14 Tax=Phytophthora TaxI...	[more]
A0A7S1GDX0_9STRA	2.100e-59	68.85	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A6G0WRD6_9STRA	3.800e-59	70.49	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A024TW89_9STRA	4.280e-59	71.31	Uncharacterized protein n=2 Tax=Aphanomyces TaxID=...	[more]
A0A067CKF6_SAPPC	5.910e-59	70.49	Uncharacterized protein n=1 Tax=Saprolegnia parasi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 42..64 score: 44.34 coord: 103..116 score: 42.65
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 2..121 e-value: 0.0011 score: -52.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..122 e-value: 8.7E-13 score: 49.9
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 2..122 e-value: 5.4E-6 score: -41.0
None	No IPR available	GENE3D	3.40.50.300		coord: 1..122 e-value: 3.0E-39 score: 136.3
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 2..119
None	No IPR available	PANTHER	PTHR24073:SF263	RAB-LIKE PROTEIN 2A-RELATED	coord: 2..119
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..122 score: 18.055
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 2..117 e-value: 5.6E-34 score: 117.1
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 2..116 e-value: 5.4E-20 score: 69.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..117

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig30488	contig	H-paniculata_contig30488:1853..2634 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig30488.8258.1	mRNA_H-paniculata_contig30488.8258.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig30488 1853..2634 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig30488.8258.1 ID=prot_H-paniculata_contig30488.8258.1|Name=mRNA_H-paniculata_contig30488.8258.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
QVIILGDSAVGKSKLMERYLMDDYNPRQLSTFALTLFRKNARLGDGAEVK
VDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKSLTDWYGELRQ
YCEGVPCLLVANKIDVDYNVSR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase