mRNA_H-paniculata_contig30455.8252.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig30455.8252.1
Unique NamemRNA_H-paniculata_contig30455.8252.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig30455.8252.1 vs. uniprot
Match: D8LL52_ECTSI (Acyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL52_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.260e-23
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 1
Query:    1 QGRSFGIIPGGFQEAALVKLGTNRVWIKARKGFVKYALQYGYRLRPVFTFGESNTYWNIQ 180
            +G SFGIIPGGFQEA L KLG +RVW+K RKG VKYALQ GYRLRP FTFGES+TYWN Q
Sbjct:  232 KGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLVKYALQSGYRLRPCFTFGESDTYWNAQ 291          
BLAST of mRNA_H-paniculata_contig30455.8252.1 vs. uniprot
Match: A0A7S4D9T5_HETAK (Acyltransferase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9T5_HETAK)

HSP 1 Score: 94.7 bits (234), Expect = 1.160e-21
Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 1
Query:    1 QGRSFGIIPGGFQEAALVKLGTNRVWIKARKGFVKYALQYGYRLRPVFTFGESNTYWNIQVSF 189
            +G SFGIIPGGF+EA + KLG  RV++K RKGFVKYAL+YGY L PV+TFGES+TY+N+Q ++
Sbjct:  193 KGESFGIIPGGFEEATISKLGAQRVYLKKRKGFVKYALKYGYALVPVYTFGESDTYYNVQGAW 255          
BLAST of mRNA_H-paniculata_contig30455.8252.1 vs. uniprot
Match: A0A7S0L9X2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L9X2_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 1.380e-18
Identity = 40/67 (59.70%), Postives = 52/67 (77.61%), Query Frame = 1
Query:    1 QGRSFGIIPGGFQEAALVKLGTNRVWIKARKGFVKYALQYGYRLRPVFTFGESNTYWNIQVSFLGLR 201
            +GRS  IIPGGF++A +   G +R ++K RKGFVKYALQYGY+L+PV+TFGE++TY      FLGLR
Sbjct:  149 EGRSLAIIPGGFEDATIFHEGKDRTFMKNRKGFVKYALQYGYKLQPVYTFGETDTYTTF-TGFLGLR 214          
BLAST of mRNA_H-paniculata_contig30455.8252.1 vs. uniprot
Match: A0A7S0JIW8_9EUKA (Acyltransferase (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JIW8_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 3.340e-18
Identity = 39/65 (60.00%), Postives = 52/65 (80.00%), Query Frame = 1
Query:    1 QGRSFGIIPGGFQEAALVKLGTNRVWIKARKGFVKYALQYGYRLRPVFTFGESNTY--WNIQVSF 189
            QGR+  IIPGGF++A + K G +R +IK RKGFVKYALQ+GY+L+P++TFGE++TY  W   VSF
Sbjct:  178 QGRNLAIIPGGFEDATIFKNGLDRTFIKRRKGFVKYALQHGYKLQPIYTFGETDTYTTWTRCVSF 242          
BLAST of mRNA_H-paniculata_contig30455.8252.1 vs. uniprot
Match: A0A7S2CE87_9STRA (Acyltransferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CE87_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 8.170e-17
Identity = 31/60 (51.67%), Postives = 48/60 (80.00%), Query Frame = 1
Query:    1 QGRSFGIIPGGFQEAALVKLGTNRVWIKARKGFVKYALQYGYRLRPVFTFGESNTYWNIQ 180
            +G + GIIPGGF++A ++K G+ R+W+K RKGF+KYAL++GYR+ PV+ FGE +T++   
Sbjct:  185 EGSNIGIIPGGFEDATIMKKGSERIWLKKRKGFIKYALRFGYRVHPVYNFGECDTFYTFH 244          
BLAST of mRNA_H-paniculata_contig30455.8252.1 vs. uniprot
Match: A0A6B2LGP4_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LGP4_9EUKA)

HSP 1 Score: 78.2 bits (191), Expect = 4.390e-16
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 1
Query:   19 IIPGGFQEAALVKLGTNRVWIKARKGFVKYALQYGYRLRPVFTFGESNTYWNI 177
            +IPGGF+EA+L   GT+ +++K RKGFVKYALQYGY L PV+ FGE +T+WN+
Sbjct:   86 LIPGGFEEASLFVKGTDVIYLKHRKGFVKYALQYGYSLTPVYVFGERDTFWNL 138          
BLAST of mRNA_H-paniculata_contig30455.8252.1 vs. uniprot
Match: A0A7S1X3V3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X3V3_9CHLO)

HSP 1 Score: 78.2 bits (191), Expect = 6.390e-16
Identity = 33/61 (54.10%), Postives = 46/61 (75.41%), Query Frame = 1
Query:    4 GRSFGIIPGGFQEAALVKLGTNRVWIKARKGFVKYALQYGYRLRPVFTFGESNTYWNIQVS 186
            G +  +IPGGFQEA   + G +R ++  RKGF+KYALQ+GYR+ PV+TFGE  TY+++ VS
Sbjct:   96 GENIALIPGGFQEATTYQYGKHRAYLTRRKGFIKYALQHGYRVYPVWTFGEERTYYSVAVS 156          
BLAST of mRNA_H-paniculata_contig30455.8252.1 vs. uniprot
Match: A0A6G0XGI7_9STRA (Acyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGI7_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 6.930e-16
Identity = 31/58 (53.45%), Postives = 46/58 (79.31%), Query Frame = 1
Query:    4 GRSFGIIPGGFQEAALVKLGTNRVWIKARKGFVKYALQYGYRLRPVFTFGESNTYWNI 177
            G +  ++PGGF+EA+L +  T++V+IK RKGF+K  +QYGY++ PV+TFGE NTYW +
Sbjct:  167 GENIALLPGGFEEASLFRYKTHQVFIKQRKGFIKLGMQYGYKVHPVYTFGEENTYWTL 224          
BLAST of mRNA_H-paniculata_contig30455.8252.1 vs. uniprot
Match: W7XI04_TETTS (Acyltransferase n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=W7XI04_TETTS)

HSP 1 Score: 77.8 bits (190), Expect = 1.790e-15
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 1
Query:    1 QGRSFGIIPGGFQEAALVKLGTNRVWIKARKGFVKYALQYGYRLRPVFTFGESNTYWNIQVSFLGLR 201
            +G++ G++PGGF+EA L     NRV+IK RKGF+KYALQYGY + P + FGE+  Y+ I+  FL  R
Sbjct:  165 KGQNIGLLPGGFEEATLTSTKENRVYIKNRKGFIKYALQYGYTVYPSYAFGENKCYYTIE-KFLSFR 230          
BLAST of mRNA_H-paniculata_contig30455.8252.1 vs. uniprot
Match: A0A7S2Q6E4_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2Q6E4_9DINO)

HSP 1 Score: 77.0 bits (188), Expect = 2.750e-15
Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 1
Query:    1 QGRSFGIIPGGFQEAALVKLGTNRVWIKARKGFVKYALQYGYRLRPVFTFGESNTYWNIQVSFLGLR 201
            +G + G IPGGFQ+A   + G  R  +K RKGFVKY LQYGYRL PV+TFGES T+     +F GL+
Sbjct:  140 KGENVGFIPGGFQDAVAFQYGKERTVLKGRKGFVKYCLQYGYRLHPVYTFGESQTF----RAFTGLQ 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30455.8252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL52_ECTSI1.260e-2378.33Acyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A7S4D9T5_HETAK1.160e-2166.67Acyltransferase n=2 Tax=Heterosigma akashiwo TaxID... [more]
A0A7S0L9X2_9EUKA1.380e-1859.70Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S0JIW8_9EUKA3.340e-1860.00Acyltransferase (Fragment) n=1 Tax=Calcidiscus lep... [more]
A0A7S2CE87_9STRA8.170e-1751.67Acyltransferase n=1 Tax=Florenciella parvula TaxID... [more]
A0A6B2LGP4_9EUKA4.390e-1662.26Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A7S1X3V3_9CHLO6.390e-1654.10Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A6G0XGI7_9STRA6.930e-1653.45Acyltransferase n=1 Tax=Aphanomyces euteiches TaxI... [more]
W7XI04_TETTS1.790e-1552.24Acyltransferase n=1 Tax=Tetrahymena thermophila (s... [more]
A0A7S2Q6E4_9DINO2.750e-1555.22Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30455contigH-paniculata_contig30455:2469..2672 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score102.1
Seed ortholog evalue1.1e-19
Seed eggNOG ortholog2880.D8LL52
KEGG rclassRC00004,RC00037
KEGG koko:K14457
KEGG ReactionR03755,R03756
KEGG Pathwayko00561,ko04975,map00561,map04975
Hectar predicted targeting categoryother localisation
EggNOG free text desc.2-acylglycerol O-acyltransferase activity
EggNOG OGsKOG0831@1,KOG0831@2759
Ec32 ortholog descriptionmono-or diacylglycerol acyltransferase type 2
Ec32 orthologEc-25_000060.1
EC2.3.1.22
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size204
Cds size204
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929934.7054-CDS-H-paniculata_contig30455:2468..26721622929934.7054-CDS-H-paniculata_contig30455:2468..2672Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30455 2469..2672 +
1691481076.4268692-CDS-H-paniculata_contig30455:2468..26721691481076.4268692-CDS-H-paniculata_contig30455:2468..2672Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30455 2469..2672 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30455.8252.1prot_H-paniculata_contig30455.8252.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig30455 2469..2672 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig30455.8252.1

>prot_H-paniculata_contig30455.8252.1 ID=prot_H-paniculata_contig30455.8252.1|Name=mRNA_H-paniculata_contig30455.8252.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
QGRSFGIIPGGFQEAALVKLGTNRVWIKARKGFVKYALQYGYRLRPVFTF
GESNTYWNIQVSFLGLR*
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mRNA from alignment at H-paniculata_contig30455:2469..2672+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig30455.8252.1 ID=mRNA_H-paniculata_contig30455.8252.1|Name=mRNA_H-paniculata_contig30455.8252.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=204bp|location=Sequence derived from alignment at H-paniculata_contig30455:2469..2672+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGTCGTTCCTTTGGGATCATTCCTGGAGGCTTTCAAGAGGCTGCGCT GGTCAAACTTGGGACCAATCGTGTTTGGATTAAGGCCCGAAAAGGGTTCG TCAAGTATGCGCTGCAGTACGGCTATCGATTGCGACCGGTGTTCACTTTC GGGGAGAGCAACACATACTGGAACATTCAGGTTAGTTTTTTGGGGTTGAG GTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig30455:2469..2672+

>mRNA_H-paniculata_contig30455.8252.1 ID=mRNA_H-paniculata_contig30455.8252.1|Name=mRNA_H-paniculata_contig30455.8252.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=408bp|location=Sequence derived from alignment at H-paniculata_contig30455:2469..2672+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGTCGTTCCTTTGGGATCATTCCTGGAGGCTTTCAAGAGGCTGCGCT
GGTCAAACTTGGGACCAATCGTGTTTGGATTAAGGCCCGAAAAGGGTTCG
TCAAGTATGCGCTGCAGTACGGCTATCGATTGCGACCGGTGTTCACTTTC
GGGGAGAGCAACACATACTGGAACATTCAGGTTAGTTTTTTGGGGTTGAG
GTAACAGGGTCGTTCCTTTGGGATCATTCCTGGAGGCTTTCAAGAGGCTG
CGCTGGTCAAACTTGGGACCAATCGTGTTTGGATTAAGGCCCGAAAAGGG
TTCGTCAAGTATGCGCTGCAGTACGGCTATCGATTGCGACCGGTGTTCAC
TTTCGGGGAGAGCAACACATACTGGAACATTCAGGTTAGTTTTTTGGGGT
TGAGGTAA
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