mRNA_H-paniculata_contig30444.8248.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig30444.8248.1
Unique NamemRNA_H-paniculata_contig30444.8248.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig30444.8248.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 2.490e-56
Identity = 100/212 (47.17%), Postives = 132/212 (62.26%), Query Frame = 1
Query:    7 HIIHIKEAWFYLIRDRDRVRMFPGEERVGSTGLQHENHIPQFMFICVVSRPDPSRDLDGEIGIRRVCVIKQAQRNSAQ-------------------RKRG----QKYDFD----------WYKDSCLPALKEKMPWLEGQEVVAQQDGATSHTGKDTPRKLNELGRDGGWNVDLVTQPAQSPDLNINHLGFFASLKSKVWRERCGTIDGLV 543
            +++H+ E+WFYL+R++++VR+F GE+  G   + HE+H+P+ M I   +RPDP+ D DG+IGI R+CVI+ AQR+S +                   R R     ++Y+FD          WY D  LPA+KEKMPWL  + VV QQDGA+ HTGK  P  LN  G   GW V+LVTQPAQSPDLNIN LG FASLK +VW     +ID LV
Sbjct:  153 NVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364          
BLAST of mRNA_H-paniculata_contig30444.8248.1 vs. uniprot
Match: UPI001C2701CF (uncharacterized protein LOC121760366 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2701CF)

HSP 1 Score: 127 bits (319), Expect = 1.700e-30
Identity = 79/266 (29.70%), Postives = 126/266 (47.37%), Query Frame = 1
Query:    7 HIIHIKEAWFYLIRDRDRVRMFPGEERVGSTGLQHENHIPQFMFICVVSRP----DPSRDLDGEIGIRRVCVIKQAQRNSAQRKRG-----------QKYDFDWYKDSCLPALKEKMPWLEGQEVVAQQDGATSHTGKDTPRKLNELGRDGGWNVDLVTQPAQSPDLNINHLGFFASLKSKVWRERCGTIDGLVEGVKNMHDTYDATNLERVWQSLFKRYNQVLKALGGNHSEVQHTETKKRQRAESLPKSVKIDREAFDAAVEWL 759
            +++HI E WFY+ +  DR  + P E+       + +  I + MF+C VSRP    D     DG++GI     +   QR S  R RG           ++   D   +  +PA+K + P    +++  QQD AT H     P +   +    G+ + L+ QPA SPD NI  LGFF +++S  + + C T+D LV  V +         L RV+ SL     ++L+  GGN  +V H    + QR   LP  ++++       ++WL
Sbjct:  167 NVVHIDEKWFYMTKASDRYYLLPDEDEP-YRACKSKRFITKVMFMCAVSRPHFGMDGQPTYDGKVGIFPFTEVMPTQRRSKNRPRGTMETKAVHSVTKEVMRDCLINKIIPAIKARWPVWASKDIYIQQDNATPHITAMDP-EFQAVANSDGFRIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSYFAELSPQTLNRVFLSLQACLTEILRCRGGNGYKVPHINKDRLQRTVGLPNQLEVEEGVVREVLQWL 430          
BLAST of mRNA_H-paniculata_contig30444.8248.1 vs. uniprot
Match: UPI002008F034 (uncharacterized protein LOC125206616 n=4 Tax=Salvia TaxID=21880 RepID=UPI002008F034)

HSP 1 Score: 124 bits (311), Expect = 2.330e-29
Identity = 80/266 (30.08%), Postives = 126/266 (47.37%), Query Frame = 1
Query:    7 HIIHIKEAWFYLIRDRDRVRMFPGEERVGSTGLQHENHIPQFMFICVVSRP----DPSRDLDGEIGIRRVCVIKQAQRNSAQRKRG-----------QKYDFDWYKDSCLPALKEKMPWLEGQEVVAQQDGATSHTGKDTPRKLNELGRDGGWNVDLVTQPAQSPDLNINHLGFFASLKSKVWRERCGTIDGLVEGVKNMHDTYDATNLERVWQSLFKRYNQVLKALGGNHSEVQHTETKKRQRAESLPKSVKIDREAFDAAVEWL 759
            +++HI E WFY+ +  DR  + P E+    +  + + +I + MF+C VSRP    D     DG++GI     +  AQR S  R RG           ++   D   +  +PA+K K P    +++  QQD AT H     P          G+ + L+ QPA SPD NI  LGFF +++S  + + C T+D LV  V +         L RV+ SL     ++L   GGN  +V H    + QR   LP  ++++ +     + +L
Sbjct:  167 NVVHIDEKWFYMTKASDRYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQRKSKNRPRGTMETKAIHSVTKEVMRDCLINKIIPAIKAKWPVWASKDIYIQQDNATPHITAMDP-DFQAAANSDGFKIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSSFAELSPQTLNRVFLSLQACLTEILLCRGGNGYKVPHINKDRLQRTVGLPNVLEVEEDVVRDVLHYL 430          
BLAST of mRNA_H-paniculata_contig30444.8248.1 vs. uniprot
Match: UPI000B8AF499 (uncharacterized protein LOC110800263 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AF499)

HSP 1 Score: 115 bits (289), Expect = 3.430e-27
Identity = 80/266 (30.08%), Postives = 129/266 (48.50%), Query Frame = 1
Query:    7 HIIHIKEAWFYLIRDRDRVRMFPGEERVGSTGLQHENHIPQFMFICVVSRPDPSRD----LDGEIGIRRVCVIKQAQRNSAQRKRG-------QKYDFDWYK----DSCLPALKEKMPWLEGQEVVAQQDGATSHTGKDTPRKLNELGRDGGWNVDLVTQPAQSPDLNINHLGFFASLKSKVWRERCGTIDGLVEGVKNMHDTYDATNLERVWQSLFKRYNQVLKALGGNHSEVQHTETKKRQRAESLPKSVKIDREAFDAAVEWL 759
            ++IHI E WFY+ ++  R  +FP E+       Q +  I + MF   V+RP  S D     DG+IGI        A RNS  R +G       Q    +  +    +  LPA+K K P    +++  QQD A  H   +  R+  E     G+N+ LV QPAQSPD+NI  LGFF +++S  ++    ++  L+E V+N +   D+  +   W  L     ++L+  GGN+ +  H   KK +R   LP  +++  +  +    ++
Sbjct:   20 NVIHIDEKWFYMSQETQRFYLFPWEDDP-YRACQSKRFISKVMFSSGVARPHISSDGIVLWDGKIGITPFVEDVAAIRNSKNRDKGTIETKALQSITKEVIRSKMIEDLLPAIKSKWPSNACKDIWIQQDNARPHISPND-REFLEAATQDGFNIRLVNQPAQSPDMNILDLGFFRAIQSIQYKSFPDSVTSLIEAVENAYIALDSKAMNFTWMHLKYCMIEILQVQGGNNYKNPHKGKKKLERLGLLPTEIEVSEKLLEETTNYM 283          
BLAST of mRNA_H-paniculata_contig30444.8248.1 vs. uniprot
Match: UPI001F5D24F1 (uncharacterized protein LOC124671868 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D24F1)

HSP 1 Score: 118 bits (296), Expect = 3.430e-27
Identity = 86/269 (31.97%), Postives = 130/269 (48.33%), Query Frame = 1
Query:   10 IIHIKEAWFYLIRDRDRVRMF---PGEERVGSTGLQHENHIPQFMFICVVSRP----DPSRDLDGEIGIRRVCVIKQAQRNSAQRKRG-----------QKYDFDWYKDSCLPALKEKMPWLE-GQEVVAQQDGATSHTGKDTPRKLNELGRDGGWNVDLVTQPAQSPDLNINHLGFFASLKSKVWRERCGTIDGLVEGVKNMHDTYDATNLERVWQSLFKRYNQVLKALGGNHSEVQHTETKKRQRAESLPKSVKIDREAFDAAVEWL 759
            I+HI E +FY  R      +    P  ERV     +++N+I + MF+  V+RP    D +   DG+IG+      + A+++S  R +G           +    +W  +  LPA+K K P  E GQ +  QQD A +H   D P        D GW++ L+ QP  SPDLNI  LGFFA+L+S   +   G++D +V  V   ++ Y      R++ +L     ++L   G NH +V H      QR   LP  ++ DR   DAA  +L
Sbjct:  197 IVHIDEKFFYRTRKSQNFYLALDEPEPERV----TKNKNYIEKVMFVAAVARPRYDVDGTETFDGKIGVWPFTFEEAAKKDSPNRLKGTMVTKVITSVTRDVSREWLVNKVLPAIKAKWPASERGQTIYIQQDNARTHIPVDDPVFCAAAQAD-GWDIRLICQPPNSPDLNILDLGFFAALQSLFHKLFPGSLDEIVLKVFQAYEQYPTERTNRIFLTLQSCMREILNLKGSNHYKVPHMRKLALQRLGILPVRLQCDRIIVDAARNFL 460          
BLAST of mRNA_H-paniculata_contig30444.8248.1 vs. uniprot
Match: UPI000B8AB67D (uncharacterized protein LOC110800636 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AB67D)

HSP 1 Score: 118 bits (295), Expect = 1.000e-26
Identity = 76/254 (29.92%), Postives = 126/254 (49.61%), Query Frame = 1
Query:    7 HIIHIKEAWFYLIRDRDRVRMFPGEERVGSTGLQHENHIPQFMFICVVSRPDPSRD----LDGEIGIRRVCVIKQAQRNSAQRKRGQ---KYDFDWYK--------DSCLPALKEKMPWLEGQEVVAQQDGATSHTGKDTPRKLNELGRDGGWNVDLVTQPAQSPDLNINHLGFFASLKSKVWRERCGTIDGLVEGVKNMHDTYDATNLERVWQSLFKRYNQVLKALGGNHSEVQHTETKKRQRAESLPKSVKI 723
            ++IHI E WFY+ R   R  +  GEE       Q+ N++ + MF+C ++RP    +     DG++GI        A+R+S  R+RG    K      K        D  LPA++ K PW   ++++ QQD +  H   +    L+   ++ G+N+ L+ QP QSPDLN+  LGFF +++S   ++    ++ LV+ VK  ++ YD   +   W  L     ++L   GGN+ +  H    K      LP +V++
Sbjct:  270 NVIHIDEKWFYMSRKTQRYYLLAGEEEP-YRATQNSNYLVKVMFLCGIARPIIGYNGEVLFDGKLGIFPFTEEVPAKRSSKNRERGTIEIKAITSVTKEVIRRKIIDELLPAIRSKWPWFASKDILIQQDNSRPHINPNDAEFLDAATQE-GFNIQLICQPPQSPDLNVLDLGFFRAIQSLQHQKFPRDVEALVKAVKEAYEAYDPKLINYTWLQLQYVMLEILGVKGGNNYKSPHKGKAKMDNLGLLPDTVEV 521          
BLAST of mRNA_H-paniculata_contig30444.8248.1 vs. uniprot
Match: UPI001C2688CA (uncharacterized protein LOC121745962 n=4 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2688CA)

HSP 1 Score: 116 bits (291), Expect = 1.530e-26
Identity = 75/266 (28.20%), Postives = 132/266 (49.62%), Query Frame = 1
Query:    7 HIIHIKEAWFYLIRDRDRVRMFPGEERVGSTGLQHENHIPQFMFICVVSRP--DPSRDL--DGEIGIRRVCVIKQAQRNSAQRKRG-----------QKYDFDWYKDSCLPALKEKMPWLEGQEVVAQQDGATSHTGKDTPRKLNELGRDGGWNVDLVTQPAQSPDLNINHLGFFASLKSKVWRERCGTIDGLVEGVKNMHDTYDATNLERVWQSLFKRYNQVLKALGGNHSEVQHTETKKRQRAESLPKSVKIDREAFDAAVEWL 759
            +++HI E WFY+ +  DR  + P +E      +Q +  I + MF+C VS+P  D + +L  DG+ GI        AQRNS  R RG           ++   D   +  +PA+K K P    ++++ QQD A  H      ++  E     G+N+ +V QP  SPD N+N LGFF +++S    +    +D L++ V    D      L+ V+ +L     ++L+  GGN+ ++ H   ++ +    LP  +++D++    ++ +L
Sbjct:  166 NVVHIDEKWFYMTKASDRYYLLP-DEIEPYRSIQSKRFINKVMFMCAVSKPHFDSNGELLFDGKYGIFPFTTQVAAQRNSKNRVRGTLETKPINSVNKEIMKDCIINQIVPAIKAKWPASSCKDIIIQQDNAKPHI-MPNDQEFKEAANTDGFNIKIVCQPPNSPDTNVNDLGFFRAIQSLQDDKSAKNVDDLLKNVVASFDELSPHTLDSVFLTLQSCLTEILRVKGGNNYKIPHMNKQRLRNLGLLPMFLEVDKDLIRDSLNYL 429          
BLAST of mRNA_H-paniculata_contig30444.8248.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.700e-26
Identity = 83/256 (32.42%), Postives = 127/256 (49.61%), Query Frame = 1
Query:   13 IHIKEAWFYLIRDRDRVRMFPGEERVGSTGLQHENHIPQFMFICVVSRPD----PSRDLDGEIGIRRVCVIKQAQRNSAQRKRG------QKYDFDWYKDSC----LPALKEKMPWLEGQEVVAQQDGATSHTGKDTPRKLNELGRDGGWNVDLVTQPAQSPDLNINHLGFFASLKSKVWRERCGTIDGLVEGVKNMHDTYDATNLERVWQSLFKRYNQVLKALGGNHSEVQHTETKKRQRAESLPKSVKIDREAF 738
            IH+ E WF+L +D+    +  GEE    T  +H++HIP+ MF+  V RP      S+  DG++GI    +   A+R+S  + +G      Q    D Y D+     LPA+  K P    + +  QQDGA  H     P +L       G N+ LVTQPA SPDLNI  LGFFA++++  +R+   TID  ++ V        +  L+ VW SL +R   ++   G N  +++H   +  ++   LP S  +    F
Sbjct:  153 IHLDEKWFFLDKDKRTFYLVKGEELPSRTA-RHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFP-SRWKTLYIQQDGARPHCTDGCP-ELVASAASFGLNIKLVTQPANSPDLNILDLGFFAAIQTLQYRKCPKTIDEFLDAVHESFHELKSDCLDSVWLSLHRRMATIIDHYGDNTMKLEHMRKEALRKQGKLPLSSTLASNVF 405          
BLAST of mRNA_H-paniculata_contig30444.8248.1 vs. uniprot
Match: UPI00053F7236 (uncharacterized protein LOC104908485 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F7236)

HSP 1 Score: 113 bits (282), Expect = 1.760e-26
Identity = 84/267 (31.46%), Postives = 134/267 (50.19%), Query Frame = 1
Query:    7 HIIHIKEAWFYLIRDRDRVRMFPGEERVGSTGLQHENHIPQFMFICVVSRP--DPSRDL--DGEIGIRRVCVIKQAQRNSAQRKRG-----------QKYDFDWYKDSCLPALKEKMPWLEGQEVVAQQDGATSHT-GKDTPRKLNELGRDGGWNVDLVTQPAQSPDLNINHLGFFASLKSKVWRERCGTIDGLVEGVKNMHDTYDATNLERVWQSLFKRYNQVLKALGGNHSEVQHTETKKRQRAESLPKSVKIDREAFDAAVEWL 759
            +IIH+ E WFYL +D  R  +FP E+       Q +    + +F+ + S+P  D   +L  DG+ GI        A++ S  R++G           QK   D       PA+  K P    +E+  QQD A +H  G D   K        G+N+ L+ QPAQSPDLN+  LGFF ++++ +++     ID L+E V++ +D +D   ++  W  L     ++LK  GGN+ +  H    + +R   LPK+V+ D +  D AV++L
Sbjct:    3 NIIHVDEKWFYLNQDTRRFYLFPREDDPYRC-CQSKRFKIKTIFMGLTSKPIYDAQGNLIHDGKFGIFPFVEKVAAKKKSKNREKGTIETKAVEKITQKVIRDMIIQHVFPAIMSKWPAGLSKEIFIQQDNARAHIQGNDEAFKA--AATQNGFNIKLIQQPAQSPDLNVLDLGFFRAIQALMYQTFPKNIDELIENVQDAYDKFDPNVVKYTWLKLHWVMVEILKVKGGNNYKNPHHGKARLERLGLLPKNVQFD-QIVDEAVQYL 265          
BLAST of mRNA_H-paniculata_contig30444.8248.1 vs. uniprot
Match: UPI00053F8527 (uncharacterized protein LOC104897330 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F8527)

HSP 1 Score: 115 bits (288), Expect = 7.340e-26
Identity = 77/266 (28.95%), Postives = 130/266 (48.87%), Query Frame = 1
Query:    7 HIIHIKEAWFYLIRDRDRVRMFPGEERVGSTGLQHENHIPQFMFICVVSRPDPSRD----LDGEIGIRRVCVIKQAQRNSAQRKRGQKYDF-----------DWYKDSCLPALKEKMPWLEGQEVVAQQDGATSHTGKDTPRKLNELGRDGGWNVDLVTQPAQSPDLNINHLGFFASLKSKVWRERCGTIDGLVEGVKNMHDTYDATNLERVWQSLFKRYNQVLKALGGNHSEVQHTETKKRQRAESLPKSVKIDREAFDAAVEWL 759
            +++HI E WFYL  D  R  + P E+   S   Q +    + MF+C  SRP    +     DG+ GI       +A+ ++  R+ G                D   ++ +PA+    P    +E+  QQD A  H     P+ +    ++ G+N+ L+ QPAQSPDLN+  LGFF ++++  ++     +D L+  V++ +D +D   L+  W  L     ++LK  GGN+ +  H   +K +R   LP++V +D+   D AV +L
Sbjct:  243 NVVHIDEKWFYLSPDMRRFYLLPAEDDPYSC-CQSKRFKIKVMFMCATSRPIKDSEGRMIHDGKFGIYPFVEYARAKYSTKNRRAGTMLTKAIESVTLPVMRDMIVNTIIPAIMRNWPEGVSKEIYIQQDNARPHIHASDPQFIAAATQN-GFNIQLINQPAQSPDLNVLDLGFFRAIQALQYQSFPKNLDELILRVQDCYDFFDPEVLKYTWLQLQYVMVEILKCKGGNNFKNPHHAKRKLERLGLLPENVTVDQAVIDEAVTYL 506          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30444.8248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE2.490e-5647.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001C2701CF1.700e-3029.70uncharacterized protein LOC121760366 n=3 Tax=Salvi... [more]
UPI002008F0342.330e-2930.08uncharacterized protein LOC125206616 n=4 Tax=Salvi... [more]
UPI000B8AF4993.430e-2730.08uncharacterized protein LOC110800263 n=1 Tax=Spina... [more]
UPI001F5D24F13.430e-2731.97uncharacterized protein LOC124671868 n=1 Tax=Loliu... [more]
UPI000B8AB67D1.000e-2629.92uncharacterized protein LOC110800636 n=1 Tax=Spina... [more]
UPI001C2688CA1.530e-2628.20uncharacterized protein LOC121745962 n=4 Tax=Salvi... [more]
A0A6G0X8U9_9STRA1.700e-2632.42Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
UPI00053F72361.760e-2631.46uncharacterized protein LOC104908485 n=1 Tax=Beta ... [more]
UPI00053F85277.340e-2628.95uncharacterized protein LOC104897330 n=1 Tax=Beta ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30444contigH-paniculata_contig30444:30..818 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score123.6
Seed ortholog evalue1.3e-25
Seed eggNOG ortholog42099.EPrPV00000024293
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Source PGD
EggNOG OGs1MJMG@121069,2CMKC@1,2QQNW@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons2
Model size759
Cds size759
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929934.4354866-CDS-H-paniculata_contig30444:29..5181622929934.4354866-CDS-H-paniculata_contig30444:29..518Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30444 30..518 -
1691481076.332872-CDS-H-paniculata_contig30444:29..5181691481076.332872-CDS-H-paniculata_contig30444:29..518Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30444 30..518 -
1622929934.4544413-CDS-H-paniculata_contig30444:548..8181622929934.4544413-CDS-H-paniculata_contig30444:548..818Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30444 549..818 -
1691481076.3469398-CDS-H-paniculata_contig30444:548..8181691481076.3469398-CDS-H-paniculata_contig30444:548..818Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30444 549..818 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30444.8248.1prot_H-paniculata_contig30444.8248.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig30444 30..818 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig30444.8248.1

>prot_H-paniculata_contig30444.8248.1 ID=prot_H-paniculata_contig30444.8248.1|Name=mRNA_H-paniculata_contig30444.8248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=253bp
GLHIIHIKEAWFYLIRDRDRVRMFPGEERVGSTGLQHENHIPQFMFICVV
SRPDPSRDLDGEIGIRRVCVIKQAQRNSAQRKRGQKYDFDWYKDSCLPAL
KEKMPWLEGQEVVAQQDGATSHTGKDTPRKLNELGRDGGWNVDLVTQPAQ
SPDLNINHLGFFASLKSKVWRERCGTIDGLVEGVKNMHDTYDATNLERVW
QSLFKRYNQVLKALGGNHSEVQHTETKKRQRAESLPKSVKIDREAFDAAV
EWL
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mRNA from alignment at H-paniculata_contig30444:30..818-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig30444.8248.1 ID=mRNA_H-paniculata_contig30444.8248.1|Name=mRNA_H-paniculata_contig30444.8248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=789bp|location=Sequence derived from alignment at H-paniculata_contig30444:30..818- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCTTACACATAATTCACATCAAAGAAGCGTGGTTTTACCTAATTCGCGA CAGGGATCGCGTCCGCATGTTCCCCGGGGAGGAAAGGGTGGGGTCCACCG GACTACAGCACGAGAATCACATTCCACAGTTCATGTTCATCTGCGTCGTT TCGCGTCCAGATCCTTCCCGCGATTTAGACGGCGAGATTGGAATCCGGCG TGTTTGCGTCATCAAACAGGCGCAGAGGAATTCCGCCCAGCGTAAACGGG GACAGAAATACGACTTCGATGTGACCATTGACGCCGAGTGATACCAGGAG TGGTACAAGGACTCTTGTCTCCCGGCATTGAAGGAAAAGATGCCGTGGTT GGAGGGCCAAGAAGTGGTCGCGCAGCAGGACGGAGCGACCTCCCACACGG GGAAAGACACGCCACGGAAGCTCAACGAACTCGGGAGGGACGGAGGGTGG AATGTCGATCTCGTAACTCAGCCTGCACAGTCACCAGATCTCAACATCAA TCATTTGGGGTTCTTTGCATCTCTGAAAAGTAAGGTTTGGAGGGAGCGCT GTGGTACGATAGACGGCCTTGTGGAAGGGGTAAAGAACATGCACGATACG TACGACGCGACAAACTTAGAGAGGGTGTGGCAGAGCCTCTTCAAGCGGTA CAATCAGGTCTTGAAGGCGCTAGGAGGTAACCATTCCGAGGTACAGCACA CGGAAACCAAGAAAAGGCAGCGTGCGGAAAGTCTGCCAAAATCGGTCAAA ATCGACCGTGAGGCTTTCGACGCGGCGGTAGAATGGTTG
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Coding sequence (CDS) from alignment at H-paniculata_contig30444:30..818-

>mRNA_H-paniculata_contig30444.8248.1 ID=mRNA_H-paniculata_contig30444.8248.1|Name=mRNA_H-paniculata_contig30444.8248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at H-paniculata_contig30444:30..818- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCTTACACATAATTCACATCAAAGAAGCGTGGTTTTACCTAATTCGCGA
CAGGGATCGCGTCCGCATGTTCCCCGGGGAGGAAAGGGTGGGGTCCACCG
GACTACAGCACGAGAATCACATTCCACAGTTCATGTTCATCTGCGTCGTT
TCGCGTCCAGATCCTTCCCGCGATTTAGACGGCGAGATTGGAATCCGGCG
TGTTTGCGTCATCAAACAGGCGCAGAGGAATTCCGCCCAGCGTAAACGGG
GACAGAAATACGACTTCGATGGCTTACACATAATTCACATCAAAGAAGCG
TGGTTTTACCTAATTCGCGACAGGGATCGCGTCCGCATGTTCCCCGGGGA
GGAAAGGGTGGGGTCCACCGGACTACAGCACGAGAATCACATTCCACAGT
TCATGTTCATCTGCGTCGTTTCGCGTCCAGATCCTTCCCGCGATTTAGAC
GGCGAGATTGGAATCCGGCGTGTTTGCGTCATCAAACAGGCGCAGAGGAA
TTCCGCCCAGCGTAAACGGGGACAGAAATACGACTTCGATTGGTACAAGG
ACTCTTGTCTCCCGGCATTGAAGGAAAAGATGCCGTGGTTGGAGGGCCAA
GAAGTGGTCGCGCAGCAGGACGGAGCGACCTCCCACACGGGGAAAGACAC
GCCACGGAAGCTCAACGAACTCGGGAGGGACGGAGGGTGGAATGTCGATC
TCGTAACTCAGCCTGCACAGTCACCAGATCTCAACATCAATCATTTGGGG
TTCTTTGCATCTCTGAAAAGTAAGGTTTGGAGGGAGCGCTGTGGTACGAT
AGACGGCCTTGTGGAAGGGGTAAAGAACATGCACGATACGTACGACGCGA
CAAACTTAGAGAGGGTGTGGCAGAGCCTCTTCAAGCGGTACAATCAGGTC
TTGAAGGCGCTAGGAGGTAACCATTCCGAGGTACAGCACACGGAAACCAA
GAAAAGGCAGCGTGCGGAAAGTCTGCCAAAATCGGTCAAAATCGACCGTG
AGGCTTTCGACGCGGCGGTAGAATGGTTGTGGTACAAGGACTCTTGTCTC
CCGGCATTGAAGGAAAAGATGCCGTGGTTGGAGGGCCAAGAAGTGGTCGC
GCAGCAGGACGGAGCGACCTCCCACACGGGGAAAGACACGCCACGGAAGC
TCAACGAACTCGGGAGGGACGGAGGGTGGAATGTCGATCTCGTAACTCAG
CCTGCACAGTCACCAGATCTCAACATCAATCATTTGGGGTTCTTTGCATC
TCTGAAAAGTAAGGTTTGGAGGGAGCGCTGTGGTACGATAGACGGCCTTG
TGGAAGGGGTAAAGAACATGCACGATACGTACGACGCGACAAACTTAGAG
AGGGTGTGGCAGAGCCTCTTCAAGCGGTACAATCAGGTCTTGAAGGCGCT
AGGAGGTAACCATTCCGAGGTACAGCACACGGAAACCAAGAAAAGGCAGC
GTGCGGAAAGTCTGCCAAAATCGGTCAAAATCGACCGTGAGGCTTTCGAC
GCGGCGGTAGAATGGTTG
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