mRNA_H-paniculata_contig30443.8247.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig30443.8247.1
Unique NamemRNA_H-paniculata_contig30443.8247.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig30443.8247.1 vs. uniprot
Match: A0A6H5K166_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K166_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.810e-18
Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = 1 
Query:    4 QVSYTSWFLDAFNYAMFLGIDIINLSIGGPDFRDEPFVDKVLAM 135
            QVSYTSWFLDAFNYA+FLG+DIINLSIGGPDF+D+PFVDKV  +
Sbjct:  762 QVSYTSWFLDAFNYALFLGVDIINLSIGGPDFKDQPFVDKVREL 805
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BLAST of mRNA_H-paniculata_contig30443.8247.1 vs. uniprot
Match: D7FUM0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUM0_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 3.840e-18
Identity = 36/44 (81.82%), Postives = 42/44 (95.45%), Query Frame = 1 
Query:    4 QVSYTSWFLDAFNYAMFLGIDIINLSIGGPDFRDEPFVDKVLAM 135
            QVSYTSWFLDAFNYA+FLG+DI+NLSIGGPDF+D+PFVDKV  +
Sbjct:  487 QVSYTSWFLDAFNYALFLGVDIVNLSIGGPDFKDQPFVDKVREL 530
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BLAST of mRNA_H-paniculata_contig30443.8247.1 vs. uniprot
Match: UPI0018A830B2 (membrane-bound transcription factor site-1 protease-like n=1 Tax=Lucilia sericata TaxID=13632 RepID=UPI0018A830B2)

HSP 1 Score: 79.3 bits (194), Expect = 4.100e-16
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:    4 QVSYTSWFLDAFNYAMFLGIDIINLSIGGPDFRDEPFVDKVLAM 135
            QVSYTSWFLDAFNYAMF  I+++NLSIGGPDF D+PFVDKVL +
Sbjct:  246 QVSYTSWFLDAFNYAMFRKINVLNLSIGGPDFMDKPFVDKVLEL 289
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BLAST of mRNA_H-paniculata_contig30443.8247.1 vs. uniprot
Match: UPI001F064CCD (membrane-bound transcription factor site-1 protease isoform X1 n=4 Tax=Lucilia cuprina TaxID=7375 RepID=UPI001F064CCD)

HSP 1 Score: 79.3 bits (194), Expect = 4.130e-16
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:    4 QVSYTSWFLDAFNYAMFLGIDIINLSIGGPDFRDEPFVDKVLAM 135
            QVSYTSWFLDAFNYAMF  I+++NLSIGGPDF D+PFVDKVL +
Sbjct:  245 QVSYTSWFLDAFNYAMFRKINVLNLSIGGPDFMDKPFVDKVLEL 288
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BLAST of mRNA_H-paniculata_contig30443.8247.1 vs. uniprot
Match: A0A0L0C414_LUCCU (Peptidase_S8 domain-containing protein n=1 Tax=Lucilia cuprina TaxID=7375 RepID=A0A0L0C414_LUCCU)

HSP 1 Score: 77.4 bits (189), Expect = 5.630e-16
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 1 
Query:    4 QVSYTSWFLDAFNYAMFLGIDIINLSIGGPDFRDEPFVDKVLAM 135
             VSYTSWFLDAFNYAMF  I+++NLSIGGPDF D+PFVDKVL +
Sbjct:    8 DVSYTSWFLDAFNYAMFRKINVLNLSIGGPDFMDKPFVDKVLEL 51
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BLAST of mRNA_H-paniculata_contig30443.8247.1 vs. uniprot
Match: A0A1A9YL30_GLOFF (Peptidase_S8 domain-containing protein n=5 Tax=Glossina TaxID=7393 RepID=A0A1A9YL30_GLOFF)

HSP 1 Score: 79.0 bits (193), Expect = 5.640e-16
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:    1 TQVSYTSWFLDAFNYAMFLGIDIINLSIGGPDFRDEPFVDKVLAM 135
            +QVSYTSWFLDAFNYAMF  I+I+NLSIGGPDF D PFVDKVL +
Sbjct:  244 SQVSYTSWFLDAFNYAMFRKINILNLSIGGPDFMDYPFVDKVLEL 288
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BLAST of mRNA_H-paniculata_contig30443.8247.1 vs. uniprot
Match: A0A1A9WBQ1_9MUSC (Peptidase_S8 domain-containing protein n=1 Tax=Glossina brevipalpis TaxID=37001 RepID=A0A1A9WBQ1_9MUSC)

HSP 1 Score: 79.0 bits (193), Expect = 5.640e-16
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:    1 TQVSYTSWFLDAFNYAMFLGIDIINLSIGGPDFRDEPFVDKVLAM 135
            +QVSYTSWFLDAFNYAMF  I+I+NLSIGGPDF D PFVDKVL +
Sbjct:  244 SQVSYTSWFLDAFNYAMFRKINILNLSIGGPDFMDYPFVDKVLEL 288
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BLAST of mRNA_H-paniculata_contig30443.8247.1 vs. uniprot
Match: A0A1I8NJH0_MUSDO (Peptidase_S8 domain-containing protein n=1 Tax=Musca domestica TaxID=7370 RepID=A0A1I8NJH0_MUSDO)

HSP 1 Score: 79.0 bits (193), Expect = 5.640e-16
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 1 
Query:    4 QVSYTSWFLDAFNYAMFLGIDIINLSIGGPDFRDEPFVDKVLAM 135
            QVSYTSWFLDAFNYAMF  I+++NLSIGGPDF D PFVDKVL +
Sbjct:  244 QVSYTSWFLDAFNYAMFRKINVLNLSIGGPDFMDRPFVDKVLEL 287
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BLAST of mRNA_H-paniculata_contig30443.8247.1 vs. uniprot
Match: A0A7S1XDM5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDM5_9RHOD)

HSP 1 Score: 78.6 bits (192), Expect = 7.710e-16
Identity = 34/42 (80.95%), Postives = 39/42 (92.86%), Query Frame = 1 
Query:    1 TQVSYTSWFLDAFNYAMFLGIDIINLSIGGPDFRDEPFVDKV 126
            TQ+SYTSWFLDAFNYA++  IDI+NLSIGGPDF DEPFV+KV
Sbjct:  250 TQISYTSWFLDAFNYALYSDIDILNLSIGGPDFSDEPFVEKV 291
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BLAST of mRNA_H-paniculata_contig30443.8247.1 vs. uniprot
Match: A0A8J4GTL1_9CHLO (Peptidase_S8 domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GTL1_9CHLO)

HSP 1 Score: 78.2 bits (191), Expect = 1.050e-15
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:    4 QVSYTSWFLDAFNYAMFLGIDIINLSIGGPDFRDEPFVDKVLAM 135
            QVSYTSWFLDAFNYAM + +++INLSIGGPDF D+PFVDKVL +
Sbjct:  721 QVSYTSWFLDAFNYAMIVQVNVINLSIGGPDFLDQPFVDKVLEV 764
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30443.8247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K166_9PHAE2.810e-1884.09Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D7FUM0_ECTSI3.840e-1881.82Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
UPI0018A830B24.100e-1679.55membrane-bound transcription factor site-1 proteas... [more]
UPI001F064CCD4.130e-1679.55membrane-bound transcription factor site-1 proteas... [more]
A0A0L0C414_LUCCU5.630e-1677.27Peptidase_S8 domain-containing protein n=1 Tax=Luc... [more]
A0A1A9YL30_GLOFF5.640e-1680.00Peptidase_S8 domain-containing protein n=5 Tax=Glo... [more]
A0A1A9WBQ1_9MUSC5.640e-1680.00Peptidase_S8 domain-containing protein n=1 Tax=Glo... [more]
A0A1I8NJH0_MUSDO5.640e-1679.55Peptidase_S8 domain-containing protein n=1 Tax=Mus... [more]
A0A7S1XDM5_9RHOD7.710e-1680.95Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A8J4GTL1_9CHLO1.050e-1577.27Peptidase_S8 domain-containing protein n=2 Tax=Vol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30443contigH-paniculata_contig30443:897..1034 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score86.7
Seed ortholog evalue3.2e-15
Seed eggNOG ortholog2880.D7FUM0
Preferred nameMBTPS1
KEGG koko:K08653
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000139,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005794,GO:0005795,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006606,GO:0006629,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006970,GO:0006972,GO:0006984,GO:0006986,GO:0006991,GO:0006996,GO:0007033,GO:0007040,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008237,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016485,GO:0016787,GO:0017038,GO:0017171,GO:0019216,GO:0019218,GO:0019219,GO:0019222,GO:0019538,GO:0023052,GO:0030968,GO:0031090,GO:0031293,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031984,GO:0032933,GO:0033036,GO:0033365,GO:0033554,GO:0033619,GO:0034504,GO:0034613,GO:0034620,GO:0034976,GO:0035103,GO:0035966,GO:0035967,GO:0036211,GO:0036500,GO:0042175,GO:0042221,GO:0042538,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045540,GO:0045893,GO:0045935,GO:0045944,GO:0046890,GO:0046907,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0062012,GO:0065007,GO:0070011,GO:0070013,GO:0070727,GO:0070887,GO:0071310,GO:0071501,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0080171,GO:0090181,GO:0098588,GO:0098791,GO:0098827,GO:0106118,GO:0140096,GO:1901564,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.serine-type endopeptidase activity
EggNOG OGsCOG1404@1,KOG4266@2759
EC3.4.21.112
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03110
Exons1
Model size138
Cds size138
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929934.3859217-CDS-H-paniculata_contig30443:896..10341622929934.3859217-CDS-H-paniculata_contig30443:896..1034Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30443 897..1034 -
1691481076.322008-CDS-H-paniculata_contig30443:896..10341691481076.322008-CDS-H-paniculata_contig30443:896..1034Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30443 897..1034 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30443.8247.1prot_H-paniculata_contig30443.8247.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig30443 897..1034 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig30443.8247.1

>prot_H-paniculata_contig30443.8247.1 ID=prot_H-paniculata_contig30443.8247.1|Name=mRNA_H-paniculata_contig30443.8247.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=46bp
TQVSYTSWFLDAFNYAMFLGIDIINLSIGGPDFRDEPFVDKVLAM*
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mRNA from alignment at H-paniculata_contig30443:897..1034-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig30443.8247.1 ID=mRNA_H-paniculata_contig30443.8247.1|Name=mRNA_H-paniculata_contig30443.8247.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=138bp|location=Sequence derived from alignment at H-paniculata_contig30443:897..1034- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACTCAGGTGTCATACACGTCGTGGTTTTTGGACGCGTTCAACTATGCCAT
GTTTCTGGGGATTGACATCATCAACCTCAGCATTGGGGGCCCGGATTTCA
GAGATGAGCCCTTCGTCGATAAGGTACTTGCAATGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig30443:897..1034-

>mRNA_H-paniculata_contig30443.8247.1 ID=mRNA_H-paniculata_contig30443.8247.1|Name=mRNA_H-paniculata_contig30443.8247.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=276bp|location=Sequence derived from alignment at H-paniculata_contig30443:897..1034- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACTCAGGTGTCATACACGTCGTGGTTTTTGGACGCGTTCAACTATGCCAT
GTTTCTGGGGATTGACATCATCAACCTCAGCATTGGGGGCCCGGATTTCA
GAGATGAGCCCTTCGTCGATAAGGTACTTGCAATGTGAACTCAGGTGTCA
TACACGTCGTGGTTTTTGGACGCGTTCAACTATGCCATGTTTCTGGGGAT
TGACATCATCAACCTCAGCATTGGGGGCCCGGATTTCAGAGATGAGCCCT
TCGTCGATAAGGTACTTGCAATGTGA
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