prot_H-paniculata_contig30421.8243.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30421.8243.1
Unique Nameprot_H-paniculata_contig30421.8243.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length90
Homology
BLAST of mRNA_H-paniculata_contig30421.8243.1 vs. uniprot
Match: D7G2P1_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P1_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 2.040e-19
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0
Query:   39 FIQDRREQVKLDNPDIAFMQQQKIMSEIWKTMSGDEREAYRSRARDDQKRYK 90
            FIQ+RREQVK DNPDIA  QQQKIMSEIWKT++ DEREAYR+RARDDQKRYK
Sbjct:  150 FIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYK 201          
BLAST of mRNA_H-paniculata_contig30421.8243.1 vs. uniprot
Match: A0A6H5KV94_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV94_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 5.340e-19
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0
Query:   39 FIQDRREQVKLDNPDIAFMQQQKIMSEIWKTMSGDEREAYRSRARDDQKRYK 90
            FIQ+RREQVK DNPDIA  QQQKIMSEIWKT++ DEREAYR+RARDDQKRYK
Sbjct:  257 FIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYK 308          
BLAST of mRNA_H-paniculata_contig30421.8243.1 vs. uniprot
Match: A0A4T0X7K4_9ASCO (HMG box domain-containing protein n=1 Tax=[Candida] inconspicua TaxID=52247 RepID=A0A4T0X7K4_9ASCO)

HSP 1 Score: 54.7 bits (130), Expect = 9.430e-8
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0
Query:   39 FIQDRREQVKLDNPDIAFMQQQKIMSEIWKTMSGDEREAYRSRARDDQKRY 89
            F  D+R+QV+ DNP I+F Q  K++ E WK+M   ERE Y  +A +D+KRY
Sbjct:   27 FANDKRDQVRADNPGISFGQIGKLLGEKWKSMDASEREKYEKQAEEDKKRY 77          
BLAST of mRNA_H-paniculata_contig30421.8243.1 vs. uniprot
Match: A0A1Y1XKB3_9FUNG (High mobility group box (Fragment) n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XKB3_9FUNG)

HSP 1 Score: 51.6 bits (122), Expect = 1.100e-6
Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   39 FIQDRREQVKLDNPDIAFMQQQKIMSEIWKTMSGDEREAYRSRARDDQKRYK 90
            F QD+R +VK DNPD +F +  KI+  +WK  S +E+E Y  +A +D++RY+
Sbjct:   24 FSQDKRAEVKRDNPDASFGELGKIIGNLWKNASPEEKEKYEKKASEDKERYR 75          
BLAST of mRNA_H-paniculata_contig30421.8243.1 vs. uniprot
Match: A0A1Y1VI96_9FUNG (HMG box domain-containing protein (Fragment) n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VI96_9FUNG)

HSP 1 Score: 50.4 bits (119), Expect = 3.560e-6
Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   39 FIQDRREQVKLDNPDIAFMQQQKIMSEIWKTMSGDEREAYRSRARDDQKRYK 90
            F QD+R +VK DNPD +F +  KI+  +WK  S +E++ Y  +A +D++RYK
Sbjct:   35 FSQDKRAEVKRDNPDASFGEIGKIIGNLWKNASPEEKKKYEKKALEDKERYK 86          
BLAST of mRNA_H-paniculata_contig30421.8243.1 vs. uniprot
Match: A0A2T9YT52_9FUNG (HMG box domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YT52_9FUNG)

HSP 1 Score: 50.1 bits (118), Expect = 5.380e-6
Identity = 23/51 (45.10%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   39 FIQDRREQVKLDNPDIAFMQQQKIMSEIWKTMSGDEREAYRSRARDDQKRY 89
            F Q+ RE+VK +NPD  F Q  KI+ E+WKTM+ ++++ Y  +A  D++RY
Sbjct:   29 FSQEYREKVKKENPDATFGQLGKILGEMWKTMTDEQKKPYALKAEKDKQRY 79          
BLAST of mRNA_H-paniculata_contig30421.8243.1 vs. uniprot
Match: UPI000B8C937F (FACT complex subunit SSRP1 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C937F)

HSP 1 Score: 52.8 bits (125), Expect = 5.740e-6
Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   39 FIQDRREQVKLDNPDIAFMQQQKIMSEIWKTMSGDEREAYRSRARDDQKRYK 90
            F Q  RE +K  +P IAF +  K++ ++WK MS +E+E Y +RAR D+KRYK
Sbjct:  568 FSQMERENIKKSHPGIAFGEVGKVLGDMWKKMSAEEKEPYEARARADKKRYK 619          
BLAST of mRNA_H-paniculata_contig30421.8243.1 vs. uniprot
Match: A0A2T6ZKJ5_TUBBO (High mobility group box domain-containing protein (Fragment) n=2 Tax=Tuber TaxID=36048 RepID=A0A2T6ZKJ5_TUBBO)

HSP 1 Score: 48.9 bits (115), Expect = 1.190e-5
Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 0
Query:   39 FIQDRREQVKLDNPDIAFMQQQKIMSEIWKTMSGDEREAYRSRARDDQKRY 89
            F  ++RE V+ DNP IAF Q  K++ E WK +S  +R+ Y ++A  D+KRY
Sbjct:   15 FANEQRENVRNDNPGIAFGQVGKVLGERWKALSDKQRQPYEAKAAADKKRY 65          
BLAST of mRNA_H-paniculata_contig30421.8243.1 vs. uniprot
Match: A0A2P6S4Q9_ROSCH (FACT complex subunit SSRP1 n=4 Tax=Rosoideae TaxID=171638 RepID=A0A2P6S4Q9_ROSCH)

HSP 1 Score: 51.6 bits (122), Expect = 1.470e-5
Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 0
Query:   39 FIQDRREQVKLDNPDIAFMQQQKIMSEIWKTMSGDEREAYRSRARDDQKRYK 90
            F Q  RE VK DNP IAF    +++ + WK MS +E+E Y ++AR D+ RYK
Sbjct:  570 FSQMERENVKKDNPGIAFTDVGRVLGDKWKKMSAEEKEPYEAKARQDKLRYK 621          
BLAST of mRNA_H-paniculata_contig30421.8243.1 vs. uniprot
Match: A0A2T9Z9V3_9FUNG (HMG box domain-containing protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9Z9V3_9FUNG)

HSP 1 Score: 48.5 bits (114), Expect = 1.970e-5
Identity = 23/51 (45.10%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   39 FIQDRREQVKLDNPDIAFMQQQKIMSEIWKTMSGDEREAYRSRARDDQKRY 89
            F Q+ RE+VKL NPD  F    KI+ E+WK M+ D+++ Y+++A  D++RY
Sbjct:   28 FSQEYREKVKLQNPDATFG---KILGEMWKEMTDDQKKPYKAKAEKDKQRY 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30421.8243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7G2P1_ECTSI2.040e-1984.62HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KV94_9PHAE5.340e-1984.62HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A4T0X7K4_9ASCO9.430e-849.02HMG box domain-containing protein n=1 Tax=[Candida... [more]
A0A1Y1XKB3_9FUNG1.100e-644.23High mobility group box (Fragment) n=1 Tax=Anaerom... [more]
A0A1Y1VI96_9FUNG3.560e-644.23HMG box domain-containing protein (Fragment) n=1 T... [more]
A0A2T9YT52_9FUNG5.380e-645.10HMG box domain-containing protein n=1 Tax=Smittium... [more]
UPI000B8C937F5.740e-648.08FACT complex subunit SSRP1 n=1 Tax=Carica papaya T... [more]
A0A2T6ZKJ5_TUBBO1.190e-545.10High mobility group box domain-containing protein ... [more]
A0A2P6S4Q9_ROSCH1.470e-548.08FACT complex subunit SSRP1 n=4 Tax=Rosoideae TaxID... [more]
A0A2T9Z9V3_9FUNG1.970e-545.10HMG box domain-containing protein n=1 Tax=Smittium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 37..90
e-value: 3.1E-12
score: 48.6
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 39..90
IPR009071High mobility group box domainPFAMPF09011HMG_box_2coord: 39..89
e-value: 1.5E-9
score: 38.3
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 39..90
score: 11.171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30421contigH-paniculata_contig30421:412..2024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30421.8243.1mRNA_H-paniculata_contig30421.8243.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30421 293..2024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30421.8243.1 ID=prot_H-paniculata_contig30421.8243.1|Name=mRNA_H-paniculata_contig30421.8243.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
MRPPEVSTTIPEERSTNHRRVGAERVDGVGSKFWWRGSFIQDRREQVKLD
NPDIAFMQQQKIMSEIWKTMSGDEREAYRSRARDDQKRYK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036910HMG_box_dom_sf
IPR009071HMG_box_dom