prot_H-paniculata_contig3042.8241.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3042.8241.1
Unique Nameprot_H-paniculata_contig3042.8241.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
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BLAST of mRNA_H-paniculata_contig3042.8241.1 vs. uniprot
Match: A0A6H5L4C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C8_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.640e-6
Identity = 40/81 (49.38%), Postives = 47/81 (58.02%), Query Frame = 0 
Query:    2 EAWSRVRGRG---RSVRHQ-ARIRPT-LGPGASPSSTPRNDLKAGLMDESGLEGVDFLSSAGGTGSLFDGFCSPLSEYNGA 77
            E W+ VR      RS RH   RI+PT + P   PS+ P+    A   D+SGL GV  LSS GGTG+L D FCSPLSE   A
Sbjct:  435 EGWAPVRALRAPPRSYRHNHPRIQPTHVSPRVGPSNPPQKPPPA---DDSGLGGVQLLSSPGGTGAL-DAFCSPLSEATAA 511
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3042.8241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4C8_9PHAE2.640e-649.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3042contigH-paniculata_contig3042:1756..2969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3042.8241.1mRNA_H-paniculata_contig3042.8241.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3042 1755..2969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3042.8241.1 ID=prot_H-paniculata_contig3042.8241.1|Name=mRNA_H-paniculata_contig3042.8241.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
TEAWSRVRGRGRSVRHQARIRPTLGPGASPSSTPRNDLKAGLMDESGLEG
VDFLSSAGGTGSLFDGFCSPLSEYNGA
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