mRNA_H-paniculata_contig30364.8230.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig30364.8230.1
Unique NamemRNA_H-paniculata_contig30364.8230.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig30364.8230.1 vs. uniprot
Match: A0A6H5JPM6_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPM6_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 1.660e-53
Identity = 102/135 (75.56%), Postives = 114/135 (84.44%), Query Frame = 1 
Query:  145 FFKVTTGASDDLRKVTQIVYMMLQQYGMGDGIGQLAFPRSEGGG-FPEERPYSDATAQKMDDEARNIVDSAYQRTLTLCQEKAEQIKMVAELLLEKETINHDDLVDLIGSRPFAAHKSYLEFISAQEHSKKLDAD 546
            F  VTTGASDDLR+VT +VY M+  YGMGDGIGQLAFP+  GGG FP+ERPYSDATA+KMD EAR +VDSAYQRTL L + K EQIK+VAELLLEKETINHDDLV LIG+RPF AHKSYLEFISA E +K+  AD
Sbjct:  774 FGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQIKLVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFISANEDAKQKMAD 908
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BLAST of mRNA_H-paniculata_contig30364.8230.1 vs. uniprot
Match: A0A7S2FU06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FU06_9STRA)

HSP 1 Score: 174 bits (440), Expect = 9.090e-50
Identity = 92/148 (62.16%), Postives = 110/148 (74.32%), Query Frame = 1 
Query:  145 FFKVTTGASDDLRKVTQIVYMMLQQYGMGDGIGQLAFPRSEGGGFPEERPYSDATAQKMDDEARNIVDSAYQRTLTLCQEKAEQIKMVAELLLEKETINHDDLVDLIGSRPFAAHKSYLEFIS---AQEHSKKLDADKTREDGGGEVG 579
            F KVTTGASDDLR+VT I+Y M+QQYG    IGQLAFP+SEGGGFPE+RPYSDATAQ MD+EA+ +VD AY+RTL L +EK  ++  VAE+LL+KETINHDD+V  IG RPF  +K Y EFIS    ++  KK   DK     GGE G
Sbjct:  159 FGKVTTGASDDLRRVTGIIYQMIQQYGFNQRIGQLAFPQSEGGGFPEQRPYSDATAQAMDEEAKKMVDVAYERTLQLMREKKPEVTAVAEMLLDKETINHDDIVGAIGHRPFEPNKQYAEFISNAWKRDEEKKAHEDKA----GGEEG 302
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BLAST of mRNA_H-paniculata_contig30364.8230.1 vs. uniprot
Match: W7TLV6_9STRA (Peptidase, FtsH n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLV6_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.280e-46
Identity = 86/126 (68.25%), Postives = 99/126 (78.57%), Query Frame = 1 
Query:  139 LFFFKVTTGASDDLRKVTQIVYMMLQQYGMGDGIGQLAFPRSEGGGFPEERPYSDATAQKMDDEARNIVDSAYQRTLTLCQEKAEQIKMVAELLLEKETINHDDLVDLIGSRPFAAHKSYLEFISA 516
            +FF KVTTGASDDLRKVTQIVY M+Q YGM D IG LAFP+ EGG   E+R YS+ TAQ MD+EA+ +VD AY RTL L QEK  QI+ +AELLL+KETINHDD+V  IG RPFAAHK Y EFI +
Sbjct:  316 IFFEKVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIES 441
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BLAST of mRNA_H-paniculata_contig30364.8230.1 vs. uniprot
Match: A0A7S2WKY8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKY8_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.410e-45
Identity = 89/145 (61.38%), Postives = 112/145 (77.24%), Query Frame = 1 
Query:  145 FFKVTTGASDDLRKVTQIVYMMLQQYGMGDGIGQLAFPRSEGGG-FPEERPYSDATAQKMDDEARNIVDSAYQRTLTLCQEKAEQIKMVAELLLEKETINHDDLVDLIGSRPFAAHKSYLEFISAQEHS---KKLDADKTREDGG 567
            F +VTTGASDDLR+VTQIVY M+Q YG    IGQLAFP+ EGGG FPE+RPYSDATAQ MD+EA+ +VD+AYQRTL + +E+ E+I+ +AELLLEKETINHDD++ LIG RPF  +  Y E+IS+ +     ++ D DK   DGG
Sbjct:  579 FGRVTTGASDDLRRVTQIVYQMIQVYGFNKRIGQLAFPQQEGGGGFPEQRPYSDATAQAMDEEAKKLVDTAYQRTLDIVRERKEEIEKMAELLLEKETINHDDIIHLIGHRPFDTNPQYAEYISSVQRDDTPQETDGDKGGGDGG 723
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BLAST of mRNA_H-paniculata_contig30364.8230.1 vs. uniprot
Match: A0A4D9DBW8_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBW8_9STRA)

HSP 1 Score: 170 bits (430), Expect = 6.710e-45
Identity = 86/126 (68.25%), Postives = 99/126 (78.57%), Query Frame = 1 
Query:  139 LFFFKVTTGASDDLRKVTQIVYMMLQQYGMGDGIGQLAFPRSEGGGFPEERPYSDATAQKMDDEARNIVDSAYQRTLTLCQEKAEQIKMVAELLLEKETINHDDLVDLIGSRPFAAHKSYLEFISA 516
            +FF KVTTGASDDLRKVTQIVY M+Q YGM D IG LAFP+ EGG   E+R YS+ TAQ MD+EA+ +VD AY RTL L QEK  QI+ +AELLL+KETINHDD+V  IG RPFAAHK Y EFI +
Sbjct:  698 IFFEKVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIES 823
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BLAST of mRNA_H-paniculata_contig30364.8230.1 vs. uniprot
Match: A0A7R9UFE2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFE2_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.120e-42
Identity = 73/124 (58.87%), Postives = 101/124 (81.45%), Query Frame = 1 
Query:  145 FFKVTTGASDDLRKVTQIVYMMLQQYGMGDGIGQLAFPRSEGGGFPEERPYSDATAQKMDDEARNIVDSAYQRTLTLCQEKAEQIKMVAELLLEKETINHDDLVDLIGSRPFAAHKSYLEFISA 516
            F +VTTGASDDLR+VT ++Y M+Q YGM + IGQLAFPR + GGFPEERPYS+ TAQ MD+EAR +VD AY+RT+ L Q+K  Q++ +A++LLEKETI+HDD+V  IG RPF  +++Y +++++
Sbjct:  292 FGRVTTGASDDLRRVTGMIYQMIQVYGMNEKIGQLAFPRQQTGGFPEERPYSEQTAQTMDEEARRMVDEAYKRTIKLIQDKKHQVEALAQMLLEKETISHDDIVSSIGPRPFQNNQTYEDYVNS 415
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BLAST of mRNA_H-paniculata_contig30364.8230.1 vs. uniprot
Match: A0A835YSU3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU3_9STRA)

HSP 1 Score: 160 bits (405), Expect = 9.380e-42
Identity = 76/129 (58.91%), Postives = 99/129 (76.74%), Query Frame = 1 
Query:  157 TTGASDDLRKVTQIVYMMLQQYGMGDGIGQLAFPRSEGGGFPEERPYSDATAQKMDDEARNIVDSAYQRTLTLCQEKAEQIKMVAELLLEKETINHDDLVDLIGSRPFAAHKSYLEFISAQEHSKKLDA 543
            TTGASDDL++VTQIVY M+  YGM   +GQLAFP+ + GGFP +RPYSD TA+ MD EA+ +VD A+QRTL L  +   Q++ +AELLL+KETINHDD++ ++G RPFA+HKSY EF+ A  H K  +A
Sbjct:  555 TTGASDDLKRVTQIVYQMITVYGMSSKVGQLAFPKEDMGGFPSDRPYSDHTAEVMDTEAKTMVDKAFQRTLDLVAKHKHQVEAIAELLLKKETINHDDMLAVLGPRPFASHKSYEEFVHATMHGKSKEA 683
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BLAST of mRNA_H-paniculata_contig30364.8230.1 vs. uniprot
Match: A0A7S1U0S3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0S3_9STRA)

HSP 1 Score: 154 bits (390), Expect = 9.540e-42
Identity = 70/122 (57.38%), Postives = 99/122 (81.15%), Query Frame = 1 
Query:  145 FFKVTTGASDDLRKVTQIVYMMLQQYGMGDGIGQLAFPRSEGGGFPEERPYSDATAQKMDDEARNIVDSAYQRTLTLCQEKAEQIKMVAELLLEKETINHDDLVDLIGSRPFAAHKSYLEFI 510
            F +VTTGASDDLR+VT ++Y M++ YGM + +GQLAFP+ + GGFP+ERPYS+ TAQ MD+EA+ +VD AYQRTL L +EK +Q++ +A++LL+KETI+HDD+VD IG RP   ++ Y +F+
Sbjct:  225 FGRVTTGASDDLRRVTDMIYQMIKIYGMNERVGQLAFPKQDNGGFPDERPYSEKTAQLMDEEAKRMVDEAYQRTLGLVREKVDQVEALAQMLLKKETISHDDIVDAIGPRPHGGNEVYDQFV 346
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BLAST of mRNA_H-paniculata_contig30364.8230.1 vs. uniprot
Match: A0A7S2IDC1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IDC1_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.930e-41
Identity = 75/132 (56.82%), Postives = 101/132 (76.52%), Query Frame = 1 
Query:  139 LFFFKVTTGASDDLRKVTQIVYMMLQQYGMGDGIGQLAFPRSEGGGFPEERPYSDATAQKMDDEARNIVDSAYQRTLTLCQEKAEQIKMVAELLLEKETINHDDLVDLIGSRPFAAHKSYLEFISAQEHSKK 534
            +FF +VTTGASDDLR+VT++VY  +Q YGM   +GQLAFP+      P ++PYSDATA+ MD+EAR IVD+AYQRTL L +EK E+++ VA LLL+KETI HDD++D+IG RPF    +Y E++S +  +KK
Sbjct:  187 IFFGRVTTGASDDLRRVTELVYSTIQIYGMNSRVGQLAFPKDPNA-MPGDKPYSDATAEAMDEEARQIVDAAYQRTLDLIREKKEEVEKVANLLLDKETITHDDIIDIIGPRPFKGDAAYNEYVSTRLANKK 317
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BLAST of mRNA_H-paniculata_contig30364.8230.1 vs. uniprot
Match: A0A835Z5J8_9STRA (Cell division protease ftsH n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J8_9STRA)

HSP 1 Score: 159 bits (401), Expect = 5.530e-41
Identity = 73/118 (61.86%), Postives = 97/118 (82.20%), Query Frame = 1 
Query:  157 TTGASDDLRKVTQIVYMMLQQYGMGDGIGQLAFPRSEGGGFPEERPYSDATAQKMDDEARNIVDSAYQRTLTLCQEKAEQIKMVAELLLEKETINHDDLVDLIGSRPFAAHKSYLEFI 510
            TTGASDDLR+VTQ+VY M+  YGM D +GQLAFP+ +GGG+P ++ YSD TAQ MD+EA+++VD AY RT++L  E   Q++ VAELLL+KETINHDD++ ++G RPFA+HKSY +FI
Sbjct:  673 TTGASDDLRRVTQMVYQMITVYGMSDKVGQLAFPKEDGGGYPGDKQYSDHTAQVMDEEAKSMVDDAYTRTVSLMTEYKHQVEAVAELLLQKETINHDDMIAILGKRPFASHKSYEDFI 790
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30364.8230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPM6_9PHAE1.660e-5375.56AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2FU06_9STRA9.090e-5062.16Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
W7TLV6_9STRA1.280e-4668.25Peptidase, FtsH n=1 Tax=Nannochloropsis gaditana T... [more]
A0A7S2WKY8_9STRA1.410e-4561.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9DBW8_9STRA6.710e-4568.25AAA domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7R9UFE2_9STRA3.120e-4258.87Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835YSU3_9STRA9.380e-4258.91P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S1U0S3_9STRA9.540e-4257.38Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2IDC1_9STRA1.930e-4156.82Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A835Z5J8_9STRA5.530e-4161.86Cell division protease ftsH n=1 Tax=Tribonema minu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30364contigH-paniculata_contig30364:2..2902 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score168.3
Seed ortholog evalue2.8e-39
Seed eggNOG ortholog2880.D7FYY6
Preferred nameAFG3L2
KEGG koko:K08956
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000902,GO:0000904,GO:0001302,GO:0002181,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005745,GO:0006412,GO:0006465,GO:0006508,GO:0006518,GO:0006605,GO:0006626,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006839,GO:0006851,GO:0006873,GO:0006874,GO:0006875,GO:0006886,GO:0006950,GO:0006952,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0007272,GO:0007275,GO:0007399,GO:0007409,GO:0007528,GO:0007568,GO:0007569,GO:0008053,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008366,GO:0009058,GO:0009059,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009719,GO:0009725,GO:0009735,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016485,GO:0016540,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017038,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0019725,GO:0019866,GO:0021675,GO:0022008,GO:0030001,GO:0030003,GO:0030030,GO:0030150,GO:0030154,GO:0030182,GO:0030554,GO:0031090,GO:0031175,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032592,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033365,GO:0034220,GO:0034357,GO:0034613,GO:0034641,GO:0034645,GO:0034982,GO:0035639,GO:0036094,GO:0036444,GO:0040008,GO:0040014,GO:0042221,GO:0042407,GO:0042552,GO:0042592,GO:0042623,GO:0042651,GO:0042692,GO:0042742,GO:0042886,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045041,GO:0045184,GO:0046907,GO:0048284,GO:0048468,GO:0048518,GO:0048519,GO:0048638,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048747,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048878,GO:0050789,GO:0050793,GO:0050801,GO:0050808,GO:0050829,GO:0050896,GO:0051082,GO:0051146,GO:0051179,GO:0051234,GO:0051239,GO:0051560,GO:0051604,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0055001,GO:0055002,GO:0055035,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060004,GO:0060013,GO:0060255,GO:0060401,GO:0061024,GO:0061025,GO:0061061,GO:0061564,GO:0065002,GO:0065007,GO:0065008,GO:0070011,GO:0070509,GO:0070585,GO:0070588,GO:0070727,GO:0070838,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072503,GO:0072507,GO:0072511,GO:0072594,GO:0072655,GO:0097002,GO:0097159,GO:0097367,GO:0098542,GO:0098573,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098798,GO:0098800,GO:0120036,GO:0120039,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1905368,GO:1990542
EggNOG free text desc.metalloendopeptidase activity
EggNOG OGsCOG0465@1,KOG0731@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03110
Exons3
Model size710
Cds size462
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30364.8230.1prot_H-paniculata_contig30364.8230.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig30364 46..2698 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929932.3886526-UTR-H-paniculata_contig30364:1..451622929932.3886526-UTR-H-paniculata_contig30364:1..45Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig30364 2..45 -
1691481075.292325-UTR-H-paniculata_contig30364:1..451691481075.292325-UTR-H-paniculata_contig30364:1..45Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig30364 2..45 -
1622929932.4494402-UTR-H-paniculata_contig30364:2698..29021622929932.4494402-UTR-H-paniculata_contig30364:2698..2902Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig30364 2699..2902 -
1691481075.3333943-UTR-H-paniculata_contig30364:2698..29021691481075.3333943-UTR-H-paniculata_contig30364:2698..2902Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig30364 2699..2902 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929932.4023974-CDS-H-paniculata_contig30364:45..3151622929932.4023974-CDS-H-paniculata_contig30364:45..315Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30364 46..315 -
1691481075.3071165-CDS-H-paniculata_contig30364:45..3151691481075.3071165-CDS-H-paniculata_contig30364:45..315Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30364 46..315 -
1622929932.4198065-CDS-H-paniculata_contig30364:1924..20301622929932.4198065-CDS-H-paniculata_contig30364:1924..2030Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30364 1925..2030 -
1691481075.3157754-CDS-H-paniculata_contig30364:1924..20301691481075.3157754-CDS-H-paniculata_contig30364:1924..2030Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30364 1925..2030 -
1622929932.4360898-CDS-H-paniculata_contig30364:2612..26981622929932.4360898-CDS-H-paniculata_contig30364:2612..2698Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30364 2613..2698 -
1691481075.3241372-CDS-H-paniculata_contig30364:2612..26981691481075.3241372-CDS-H-paniculata_contig30364:2612..2698Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30364 2613..2698 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig30364.8230.1

>prot_H-paniculata_contig30364.8230.1 ID=prot_H-paniculata_contig30364.8230.1|Name=mRNA_H-paniculata_contig30364.8230.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp
MMLQQYGMGDGIGQLAFPRSEGGGFPEERPYSDATAQKMDDEARNIVDSA
YQRTLTLCQEKAEQIKMVAELLLEKETINHDDLVDLIGSRPFAAHKSYLE
FISAQEHSKKLDADKTREDGGGEVGEDKDAAVGEGDEGKDQDKAKAAGAS
ETP*
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mRNA from alignment at H-paniculata_contig30364:2..2902-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig30364.8230.1 ID=mRNA_H-paniculata_contig30364.8230.1|Name=mRNA_H-paniculata_contig30364.8230.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2901bp|location=Sequence derived from alignment at H-paniculata_contig30364:2..2902- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGTTGCACCCATTAAAAGACCTCTGGCTAGACTTCCCGTCATGCTCAG
TTCACGAGCTACCCTACCCGTTCGGGCGTAGGTCCGTGGCAGCCTCTTCG
TTGTATGCTTTTTTTCCACGGTGTGTGTGTGTGTTTTTTTGTTTTTTTTC
AAGGTAACCACGGGAGCGTCCGATGACCTGCGAAAGGTGACGCAGATTGT
GTACATGATGCTCCAGCAGTACGGCATGGGGGATGGCATTGGTCAGCTGG
CCTTCCCGAGGTCGGAGGGCGGTGGTTTTCCGGAGGAGAGGTAGGTGACA
TGGGTACGGTCAAGTAATGGATGATGACAAAAATCGCCACAAGAGGTGAA
AGAAAAGAAGCTAACTTGGTTGACGTGAGCTCAAAATTTGGGAGTAAGAG
TATAACATCAAAGCAAGAGCCATAAATGTGCTGTAGTATGTTCAACTGGC
ACTTTAAAAGTAGCTATTTTTATATGTATGCGTGGGGTGTCGTGTTTCGT
GTTGTGACATGTTGATGGAAGTGACCTGTGCTGACCACAAATTCGAAGCT
GTCTTTTAGTGTGAGACAAGAGGTACCATGCTGCCTTCTATCATAAGGAG
TATAGTACATGAATGAACGATGTGCGTGCGGCCTGCGTTGTTGGGCACAG
GCTGTTTCTTAGGGTGGGTCTTGATCTTCGTTTTAAGGTATCGTGTTTCT
TATACGTTTTGGACAGTAAGTGTATCGAGTCATGTTCTACAGAAAAAATT
TCTCAACGTTATGACTTTTTTTAATGATATTGTTTTGCTGCCGACGTCGT
AGATGATGTTTCGTTATTGCACAGTGTGGTGGATAATATCTTTCTACACA
CCCACTTTTGGATGATGACCAGGCCTTACTCGGACGCGACGGCGCAAAAA
ATGGACGACGAGGCAAGGAACATAGTCGACAGTGCCTACCAGCGCACTCT
TACCTTGTGCCAGGAGAAAGCGGAACAGGTAAATTGATGGGAGCAATATT
GAAACCGAACAAAAGCCGTAGTGACATGATGTCTTTGCAGGTGATACGGA
GGCGGTTTAGGTTCGCGAAGACACTGTAAGCCTTAGGTTGCTCGGGGTTA
GTGAGAGAGTAAGGACGCATACAACCCGCGTTTTGCGGGAGTCGGAAATC
GGGACTTAGTACTTGGTACCTAGTCGTGGGCTTAAGCTGCTCCCCTCACA
ACGTTTCCGAGTGGTGCATAGAGAGGGTGCACACTCTGGGGTGGAAAGGA
AAGGACGGATACAACAGTCAAAATCGAATCGCGACAGTTTCGGGAGGGTA
AAAAACGCAAAATTTCTATATGACTGTTTTTTTTTTGTTTTTTTTTTCAA
AATGATGTGACGATGGTTTTGGAACAGTGCTTTTTTAAATATGAAGGTGT
TTTCGTTATGGTTGTTAGTCGTTACTCGCTCATATCATATTGTCGTATAC
GCTTGGGTGTTTTTGGTTTGTCTGTTTCTTTTTTGTTTTACTTGCTATGA
AGACCGCATTGAAGCTCGTCATTTGATTCTATTTTACTTGTATTTTGTAT
CCAAAAGGTGTTTTCTCCTGCAGTTGCGAATGAATGTTTGGAAAAAAACA
CGGTTGAGCAAGGATCCAGTAAAACGTGGGCGTAAAAAATATGGCGATAA
CCCCGTTGAAACACAACGGATATCTACTCGACTATGTTCGAGCCGCCGGA
TCACTTGTCGAACACGATATTTTTTAAAATTTACATGCGATATTTGTATT
TTACAGCAACGGTCTAGTTCTAATAATAGTAGATAGTGTAGAGAGAATAG
GTGTGACAATGGCCTCAAATGAGCATGGAAAACGAACGTATGTTAAGCAG
TAGTGTCAACATTGCTAACTAACTAAGCGATTCCGCAAATAGGCCAAATT
AAGCATGCGCACAGGGGGAGGGGGGAGTCGTACAAATGTCGTGCATGCTT
TAATTGTTGGACCGTTGACCACACATTTGTCACACAAAGTTGGCGCCGAG
ACATTCTACACCGCGGTACGGGGGGATGTGCCGAGTTATTCAAGCACCTC
CCATCGATCCATAAGGGCAGCGTGTGTTCAGTCGGACAGTATATTGAGGC
AACAAGGACTGGCTCTGGCCTGTGTTGAGCCCTCTTGTGTTGATACCAGT
CGGTATTCGATGGTAACTCGTTTTTGCCATTGGCCCAGGAGCGAAGGGGG
CGAGCACGCACCCCCGACAAACTATATCATGTAGTTTTCTGGTATCGCAC
GGTGTCGGTGAAGAACGGTCGCGATTTTTTTTTTTTTTTTTTAAGCGACA
ACTTGTATATGGCCCCCGCTGGATGAGATCACGATGCTCTGTTTTTAAGT
TTGATCCAATTGCTCACTTAAGTTTGCTGGTACAGTCAGAATTTCCGCAT
CGTGTACACATGTATTATTCTGGCACGGCGAAGAGTAGGTGCAAGCACTG
CAGTCAATACAGGTCTCCCAGCGAGATGGTGAGATCATGGTAACATAGTA
TACATCGCACACACCCCATCTCTCTTCCCCTCTTCCCCTGCTGTGTGATC
TCGCGAAATCCCGTTGTCGTTGTACGGTTTAACGTAGATCAAGATGGTGG
CCGAGTTGCTCCTGGAGAAAGAGACGATCAACCACGACGACCTCGTAGAC
CTAATCGGCTCGAGACCCTTTGCCGCGCATAAGAGCTACCTGGAGTTCAT
CTCGGCGCAGGAGCACAGTAAGAAACTGGACGCCGACAAGACGCGAGAGG
ACGGTGGAGGGGAAGTGGGGGAAGATAAGGATGCGGCCGTTGGAGAGGGG
GATGAAGGGAAGGACCAGGATAAGGCGAAGGCTGCTGGGGCTTCAGAAAC
TCCATGAATTTTGTTTTATGACCATGATGCGCTGTTTTTCTCGGAAAGGG
G
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Coding sequence (CDS) from alignment at H-paniculata_contig30364:2..2902-

>mRNA_H-paniculata_contig30364.8230.1 ID=mRNA_H-paniculata_contig30364.8230.1|Name=mRNA_H-paniculata_contig30364.8230.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=924bp|location=Sequence derived from alignment at H-paniculata_contig30364:2..2902- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGCTCCAGCAGTACGGCATGGGGGATGGCATTGGTCAGCTGGCCTT
CCCGAGGTCGGAGGGCGGTGGTTTTCCGGAGGAGAGATGATGCTCCAGCA
GTACGGCATGGGGGATGGCATTGGTCAGCTGGCCTTCCCGAGGTCGGAGG
GCGGTGGTTTTCCGGAGGAGAGGCCTTACTCGGACGCGACGGCGCAAAAA
ATGGACGACGAGGCAAGGAACATAGTCGACAGTGCCTACCAGCGCACTCT
TACCTTGTGCCAGGAGAAAGCGGAACAGGCCTTACTCGGACGCGACGGCG
CAAAAAATGGACGACGAGGCAAGGAACATAGTCGACAGTGCCTACCAGCG
CACTCTTACCTTGTGCCAGGAGAAAGCGGAACAGATCAAGATGGTGGCCG
AGTTGCTCCTGGAGAAAGAGACGATCAACCACGACGACCTCGTAGACCTA
ATCGGCTCGAGACCCTTTGCCGCGCATAAGAGCTACCTGGAGTTCATCTC
GGCGCAGGAGCACAGTAAGAAACTGGACGCCGACAAGACGCGAGAGGACG
GTGGAGGGGAAGTGGGGGAAGATAAGGATGCGGCCGTTGGAGAGGGGGAT
GAAGGGAAGGACCAGGATAAGGCGAAGGCTGCTGGGGCTTCAGAAACTCC
ATGAATCAAGATGGTGGCCGAGTTGCTCCTGGAGAAAGAGACGATCAACC
ACGACGACCTCGTAGACCTAATCGGCTCGAGACCCTTTGCCGCGCATAAG
AGCTACCTGGAGTTCATCTCGGCGCAGGAGCACAGTAAGAAACTGGACGC
CGACAAGACGCGAGAGGACGGTGGAGGGGAAGTGGGGGAAGATAAGGATG
CGGCCGTTGGAGAGGGGGATGAAGGGAAGGACCAGGATAAGGCGAAGGCT
GCTGGGGCTTCAGAAACTCCATGA
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