prot_H-paniculata_contig3036.8228.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3036.8228.1
Unique Nameprot_H-paniculata_contig3036.8228.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length208
Homology
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BLAST of mRNA_H-paniculata_contig3036.8228.1 vs. uniprot
Match: A0A836CNI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNI9_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 7.760e-9
Identity = 44/132 (33.33%), Postives = 56/132 (42.42%), Query Frame = 0 
Query:   21 LRECLSEKARQFFEGANKEGVTVLKQMIEMEAWQRVPIPLQVEASGVGGLIDSNAMR----------FCSPHRVYRGIRQPYLHLMHDVMSLDPTDTSQHQHHPLPSDEAAESVPRQPLLREWHSRGNPFRV 142
            LR CL +K+ QFF GA+ E  TVL+QM+E E WQRVP+ L                           FC+    YRGI   Y  +   +       TS       PS           LL EW +RGNPF++
Sbjct: 1117 LRGCLQDKSEQFFRGAHAEAATVLRQMLEHEQWQRVPVMLDAAXXXXXXXXXXXXXXXXXXXXXXXXFCAAGGAYRGISHRYADVARAIKDAISGGTSP------PS-----------LLMEWGTRGNPFQM 1231
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3036.8228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CNI9_9STRA7.760e-933.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3036contigH-paniculata_contig3036:5853..15768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3036.8228.1mRNA_H-paniculata_contig3036.8228.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3036 5853..15768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3036.8228.1 ID=prot_H-paniculata_contig3036.8228.1|Name=mRNA_H-paniculata_contig3036.8228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp
MEGGGTGGHAACVCESAGGALRECLSEKARQFFEGANKEGVTVLKQMIEM
EAWQRVPIPLQVEASGVGGLIDSNAMRFCSPHRVYRGIRQPYLHLMHDVM
SLDPTDTSQHQHHPLPSDEAAESVPRQPLLREWHSRGNPFRVLGESHSGS
PSVEGSQDEMSFAAGEGMAGVGLGRLPGGTDVDDDPDEFSASGVGFGAPM
ARWGRERG
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