prot_H-paniculata_contig3035.8226.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3035.8226.1
Unique Nameprot_H-paniculata_contig3035.8226.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length563
Homology
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BLAST of mRNA_H-paniculata_contig3035.8226.1 vs. uniprot
Match: D7FZT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZT4_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 4.040e-31
Identity = 96/204 (47.06%), Postives = 124/204 (60.78%), Query Frame = 0 
Query:  359 LGCSTITTEIVVPSSELDFEAEGGQWRYLEAGAAPGDGEDTSPVEVSKGVRFSTTLVAEDSGDAESRIIDLSSKCDEAERRLRAAEIAMEKLEPTPPAQPITDRKPPXXXXXXXXXXXXXXXXKKGSRRKQDGSRSVAGAXXXXXXXXXXXXXXXXVMASVTSKIEKVYGMAKPFGLLAWSCRNLAMFAGAVVAMHYHGEYLAV 562
            LGCST TTE+VVPSSELDF+   GQWRYLEA + P  G+    VEV+KG+RFST+L A DS + + RI++LS K  +AERR+RAAE  ++KL+P+            XXXXXXXXXXXX    K   ++ + G+R+V                      ++++ +   YG AK  G LAW  RNL  FA AV AMH HG+YLAV
Sbjct:  292 LGCSTGTTEVVVPSSELDFKLSQGQWRYLEADSTPVHGDGA--VEVTKGIRFSTSLKAVDSREDDDRIVELSEKLSDAERRVRAAEAMIKKLQPSSATA--------XXXXXXXXXXXXAGVRKSALKKSKGGTRAVKS----------DAAKRRGAAGALSAAVGNAYGKAKTAGALAWGARNLVFFAAAVAAMHLHGDYLAV 475
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3035.8226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZT4_ECTSI4.040e-3147.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..29
NoneNo IPR availableCOILSCoilCoilcoord: 426..453

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3035contigH-paniculata_contig3035:10730..16499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3035.8226.1mRNA_H-paniculata_contig3035.8226.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3035 10730..16644 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3035.8226.1 ID=prot_H-paniculata_contig3035.8226.1|Name=mRNA_H-paniculata_contig3035.8226.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=563bp
MGDALASAKKELADRRDDASKCIAELKAAQSMMGGPASAPRNLTVTLREI
YGEIAIDRVAVRCPSGPTQEKVVAEGIPCVFRVGAGVSTFDLVLMAEQAA
PSEATAVSALSAAAEAAAAKAASVGSAEGSTGAVTAEIGAGVGFEGGEDN
DDDQPAATTNSAEHADADAAAAVETQEGPEGDEVVVGATAVAEPSAVVEP
VPVAEEPAALEEPAVSLGNEDATSDSRIDDTIIAVNTEAESVAPTIVPEE
GDAAESETPAPVVSAAVDGEQEEDGVVPAEALADDAVVDTTVDIAATAVT
AAAIPDERAEAVGKAAGAEEVIDAATAVAGLTVEPNAGVVATVTKTAASA
ASAVQSSPLGCSTITTEIVVPSSELDFEAEGGQWRYLEAGAAPGDGEDTS
PVEVSKGVRFSTTLVAEDSGDAESRIIDLSSKCDEAERRLRAAEIAMEKL
EPTPPAQPITDRKPPTAAGGAGGGSARKSALKKGSRRKQDGSRSVAGAGA
GPKGRNAGGGGGGGVMASVTSKIEKVYGMAKPFGLLAWSCRNLAMFAGAV
VAMHYHGEYLAV*
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