prot_H-paniculata_contig3031.8220.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3031.8220.1
Unique Nameprot_H-paniculata_contig3031.8220.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length237
Homology
BLAST of mRNA_H-paniculata_contig3031.8220.1 vs. uniprot
Match: D7G4Q8_ECTSI (Geranylgeranyltransferase type 1 beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q8_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 2.140e-35
Identity = 87/195 (44.62%), Postives = 105/195 (53.85%), Query Frame = 0
Query:    2 VDLNWDAHAGLFLRSLVGPGMPKQYTGADTSRVTLAYFCVVGLDLLGKLNTCSKAHREAVRDWVLAQQVVSTGPGRPGENERRCGFRGGPYTVNRSNLDEQTRVRAGSQERKTCDLQCAEKTDEAGAASYSQTPSLDNEALAVDEGIQFPYMDEGHLAMTYSALATLSTLGDDLAS-VDSEATVRAIAALQREDG 195
            +  +WD H G F RSL+ PG+P+QYT ADT R TLAYFCV GLDL+GKL++C++A R  V+ WVLAQQV        G + RR GFRGGP+ V                                  A  SQ    D      D G       EG+LA TYSALATL  L  DL + VDS+A VRA+ +LQREDG
Sbjct:    1 MGFDWDKHTGFFHRSLLNPGLPRQYTTADTQRTTLAYFCVTGLDLIGKLDSCTEAERATVKRWVLAQQVA-------GGDWRRRGFRGGPFGV---------------------------------VAEPSQRNGED------DAG-------EGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQREDG 142          
BLAST of mRNA_H-paniculata_contig3031.8220.1 vs. uniprot
Match: A0A7S2WN64_9STRA (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WN64_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.110e-21
Identity = 64/174 (36.78%), Postives = 82/174 (47.13%), Query Frame = 0
Query:   22 MPKQYTGADTSRVTLAYFCVVGLDLLGKLNTCSKAHREAVRDWVLAQQVVSTGPGRPGENERRCGFRGGPYTVNRSNLDEQTRVRAGSQERKTCDLQCAEKTDEAGAASYSQTPSLDNEALAVDEGIQFPYMDEGHLAMTYSALATLSTLGDDLASVDSEATVRAIAALQREDG 195
            +P  YTG DTSR++L YF ++GLD+LG L     + R+ V DWV   Q+    P R       CGFRGGP+                                      +   P  +    AV E       D GH+AMTY+ALA L TLGDDLA V +   ++A+AALQREDG
Sbjct:   29 LPHHYTGLDTSRMSLLYFGIIGLDMLGALEEVLGSRRQQVVDWVYNCQI----PPRAAFQPAHCGFRGGPFL------------------------------------GHLYDPDHEGAEYAVSE------YDSGHIAMTYTALAVLLTLGDDLARVHTADIIQAVAALQREDG 156          
BLAST of mRNA_H-paniculata_contig3031.8220.1 vs. uniprot
Match: A0A7S3ANB8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ANB8_9EUKA)

HSP 1 Score: 92.4 bits (228), Expect = 1.850e-18
Identity = 66/203 (32.51%), Postives = 90/203 (44.33%), Query Frame = 0
Query:    5 NWDAHAGLFLRSLVGPGMPKQYTGADTSRVTLAYFCVVGLDLLGKLNTCSKAHREAVRDWVLAQQVVSTGPGRPGENERRC------------GFRGGPYTVNRSNLDEQTRVRAGSQERKTCDLQCAEKTDEAGAASYSQTPSLDNEALAVDEGIQFPYMDEGHLAMTYSALATLSTLGDDLASVDSEATVRAIAALQREDG 195
            N   H   FL+ L    +P+ YT  DT+R+T+ YFCV GLD+LG ++   K   + +  WV AQQV+ T PG P   +  C            GFRGGP+                               + AG  S S+                    D GH+AM+Y+ALA L+ LGDDLA+VD  A +R + +LQ   G
Sbjct:   23 NVGLHVKYFLKCL--DVLPQPYTSLDTNRLTVVYFCVAGLDVLGAMD---KVDAQRIIRWVYAQQVLPTTPGAPAAGDEACHSSTGFREGLPGGFRGGPFLGG----------------------------EFAGRPSNSE-------------------FDGGHIAMSYTALALLAMLGDDLAAVDRPAVLRLVRSLQGPTG 173          
BLAST of mRNA_H-paniculata_contig3031.8220.1 vs. uniprot
Match: UPI001129166A (geranylgeranyl transferase type-1 subunit beta isoform X5 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI001129166A)

HSP 1 Score: 92.0 bits (227), Expect = 2.590e-18
Identity = 70/196 (35.71%), Postives = 103/196 (52.55%), Query Frame = 0
Query:    7 DAHAGLFLRSLVGPGMPKQYTGADTSRVTLAYFCVVGLDLLGKLNTCSKAHREAVRDWVLAQQVVSTGPGRPGENERRCGFRGG-----PYTVNRSNLDEQTRVRAGSQERKTCDLQCAEKTDEAGAASYSQTPSLDNEAL--AVDEGIQFPYMDEGHLAMTYSALATLSTLGDDLASVDSEATVRAIAALQREDG 195
            + H   F R L    +P++Y+  +TSR+T+A+F + GLD+L  L+  +KA    + +W+ + QV+ T       N  RCGFRG      P+  ++S  D +T +  GSQ       QC +       ASY     + +         GI  PY D GH+AMTY+AL++L  LGDDL+ V  EA +  + ALQ EDG
Sbjct:   19 ERHVRFFQRCL--QVLPERYSSLETSRLTIAFFALSGLDMLDSLDVVNKAD---IIEWIYSLQVLPT---EDNSNLNRCGFRGSSYLGMPFNPSKSAQDAETEL--GSQHGYPS-WQCPK-------ASYIPCNHITSHLGKGVKGPGILHPY-DSGHIAMTYTALSSLIILGDDLSRVYVEACLAGLRALQLEDG 195          
BLAST of mRNA_H-paniculata_contig3031.8220.1 vs. uniprot
Match: UPI001B8891F4 (geranylgeranyl transferase type-1 subunit beta-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B8891F4)

HSP 1 Score: 89.7 bits (221), Expect = 2.410e-17
Identity = 60/193 (31.09%), Postives = 90/193 (46.63%), Query Frame = 0
Query:    3 DLNWDAHAGLFLRSLVGPGMPKQYTGADTSRVTLAYFCVVGLDLLGKLNTCSKAHREAVRDWVLAQQVVSTGPGRPGENERRCGFRGGPYTVNRSNLDEQTRVRAGSQERKTCDLQCAEKTDEAGAASYSQTPSLDNEALAVDEGIQFPYMDEGHLAMTYSALATLSTLGDDLASVDSEATVRAIAALQREDG 195
            D   D H   F+R+L    +P   +  DT+R+T+A+F + GLD+LG +N   + H++ + DW+ + QV+   P   G N ++CGFRG                                    +    +S  P    E L        PY D  H+AMTY+ALA+L  LGDD + VD  A V  + ALQ+++G
Sbjct:    5 DFLRDKHVKFFIRTL--RVLPSSLSSLDTNRMTVAFFALSGLDVLGAINVLEEEHKQMI-DWIYSLQVL---PHASGSNRQQCGFRG------------------------------------SSTLGHSYIPETAREKL-------IPY-DSSHIAMTYTALASLLILGDDFSRVDRMAIVDGLGALQQDNG 147          
BLAST of mRNA_H-paniculata_contig3031.8220.1 vs. uniprot
Match: A0A433DGS2_9FUNG (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DGS2_9FUNG)

HSP 1 Score: 88.2 bits (217), Expect = 1.060e-16
Identity = 65/194 (33.51%), Postives = 88/194 (45.36%), Query Frame = 0
Query:    3 DLNWDAHAGLFLRSLVGPGMPKQYTGADTSRVTLAYFCVVGLDLLGKLNT-CSKAHREAVRDWVLAQQVVSTGPGRPGENERRCGFRGGPYTVNRSNLDEQTRVRAGSQERKTCDLQCAEKTDEAGAASYSQTPSLDNEALAVDEGIQFPYMDEGHLAMTYSALATLSTLGDDLASVDSEATVRAIAALQREDG 195
            D ++  H   F RSL    +P  YT  DTSR+TLA+FC+ GL+LLG L+   S A ++   DW+ AQQ++      P  NE  CGFRG                                       +S+   P   N          +   D G+LA TYSALA L  LGDDL+ V+ +A V  +  LQ++DG
Sbjct:   28 DFSFKKHVAYFKRSL--SMLPYNYTETDTSRMTLAFFCLSGLELLGVLDEEISAADKQDYVDWIYAQQILPD-TADPSLNELHCGFRG---------------------------------------SSWPGRPFEPNATHTT-----YQSYDSGNLANTYSALANLILLGDDLSRVNRDAIVNTMRHLQQKDG 174          
BLAST of mRNA_H-paniculata_contig3031.8220.1 vs. uniprot
Match: A0A433Q939_9FUNG (Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q939_9FUNG)

HSP 1 Score: 88.2 bits (217), Expect = 1.400e-16
Identity = 65/194 (33.51%), Postives = 88/194 (45.36%), Query Frame = 0
Query:    3 DLNWDAHAGLFLRSLVGPGMPKQYTGADTSRVTLAYFCVVGLDLLGKLNT-CSKAHREAVRDWVLAQQVVSTGPGRPGENERRCGFRGGPYTVNRSNLDEQTRVRAGSQERKTCDLQCAEKTDEAGAASYSQTPSLDNEALAVDEGIQFPYMDEGHLAMTYSALATLSTLGDDLASVDSEATVRAIAALQREDG 195
            D ++  H   F RSL    +P  YT  DTSR+TLA+FC+ GL+LLG L+   S A ++   DW+ AQQ++      P  NE  CGFRG                                       +S+   P   N          +   D G+LA TYSALA L  LGDDL+ V+ +A V  +  LQ++DG
Sbjct:   28 DFSFKKHVAYFKRSL--SMLPYNYTETDTSRMTLAFFCLSGLELLGVLDEEISAADKQDYVDWIYAQQILPD-TADPSLNELHCGFRG---------------------------------------SSWPGRPFEPNATHTT-----YQSYDSGNLANTYSALANLILLGDDLSRVNRDAIVNTMRHLQQKDG 174          
BLAST of mRNA_H-paniculata_contig3031.8220.1 vs. uniprot
Match: A0A0M0JLL5_9EUKA (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JLL5_9EUKA)

HSP 1 Score: 88.2 bits (217), Expect = 1.410e-16
Identity = 69/192 (35.94%), Postives = 94/192 (48.96%), Query Frame = 0
Query:    4 LNWDAHAGLFLRSLVGPGMPKQYTGADTSRVTLAYFCVVGLDLLGKLNTCSKAHREAVRDWVLAQQVVSTGPGRPGENERRCGFRGGPYTVNRSNLDEQTRVRAGSQERKTCDLQCAEKTDEAGAASYSQTPSLDNEALAVDEGIQFPYMDEGHLAMTYSALATLSTLGDDLASVDSEATVRAIAALQREDG 195
            L+  AHA  FL+ L    +P+ Y+  DT+R+T+AYFC+ GLD+LG L+   + +  AV +WV AQQ+    P  P +     GFRG  Y                        L C      AGAA  + + + D                 GHLAMTY+ALA L+ LGDDL+ VD  AT+R +  LQ+ DG
Sbjct:    8 LHHAAHAKYFLKLL--ETLPEPYSSLDTNRLTVAYFCISGLDILGALD---QVNATAVINWVYAQQL-RVPPDAPAD--WTGGFRGAGY------------------------LGCPF----AGAAGAAPSSAFDT----------------GHLAMTYTALAILTILGDDLSRVDRAATLRHVRGLQQPDG 147          
BLAST of mRNA_H-paniculata_contig3031.8220.1 vs. uniprot
Match: A0A6Q2WQC5_ESOLU (Geranylgeranyl transferase type-1 subunit beta n=4 Tax=Esox lucius TaxID=8010 RepID=A0A6Q2WQC5_ESOLU)

HSP 1 Score: 87.4 bits (215), Expect = 2.280e-16
Identity = 68/197 (34.52%), Postives = 95/197 (48.22%), Query Frame = 0
Query:    2 VDLNWDAHAGLFLRSLVGPGMPKQYTGADTSRVTLAYFCVVGLDLLGKLNTCSKAHREAVRDWVLAQQVVSTGPGRPGENERRCGFRGGPYTVNRSNLDEQTRVRAGSQERKTCDLQCAEKTDEAGAASYSQTPSLDNEALAVDEGIQFPYMDEGHLAMTYSALATLSTLGDDLASVDSEATVRAIAALQREDGRCY 198
            +D   D H   F R L    +P++Y+  +TSR+T+ +F + GLD+L  L+   K    ++ +WV + QV+   P     N  RCGFRG  +     N  E     A  Q     D+     T    A      PS+         G+  PY D GH+AMTY+ LA+L  LGDDL  V+ EA +  + ALQ EDG  Y
Sbjct:   14 IDFLKDRHVRFFQRCL--QVLPERYSSLETSRLTIVFFALSGLDVLDSLDVIDKP---SLIEWVYSLQVL---PIEDQSNLGRCGFRGSSHIGVPYNTSEVFFKPAHVQSPCLSDILVDWLTPSVQARRL--IPSV---LSPQGPGVSHPY-DSGHVAMTYTGLASLIILGDDLGRVNKEACLMGLKALQLEDGSFY 196          
BLAST of mRNA_H-paniculata_contig3031.8220.1 vs. uniprot
Match: UPI001EAF702B (geranylgeranyl transferase type-1 subunit beta-like isoform X2 n=1 Tax=Oncorhynchus gorbuscha TaxID=8017 RepID=UPI001EAF702B)

HSP 1 Score: 85.9 bits (211), Expect = 2.780e-16
Identity = 62/197 (31.47%), Postives = 87/197 (44.16%), Query Frame = 0
Query:    2 VDLNWDAHAGLFLRSLVGPGMPKQYTGADTSRVTLAYFCVVGLDLLGKLNTCSKAHREAVRDWVLAQQVVSTGPGRPGENERRCGFRGGPYTVNRSNLDEQTRVRAGSQERKTCDLQCAEKTDEAGAASYSQTPSLDNEALAVDEGIQFPYMDEGHLAMTYSALATLSTLGDDLASVDSEATVRAIAALQREDGRCY 198
            +D   D H   F R L    +P++Y+  +TSR+T+ +F + GLD+L  LN   K    ++ +WV + QV+ T       N  RCGFRG  +                                      YS +            G+  PY D GH+AMTY+ LA L  LGDDL+ V+ EA +  + ALQ EDG  Y
Sbjct:   14 IDFLKDRHVRFFQRCL--QVLPERYSSLETSRLTIVFFALSGLDVLDSLNVIDKP---SLIEWVYSLQVIPT---EDQSNLGRCGFRGSSHI----------------------------------GVPYSTSKG---------PGVSHPY-DSGHVAMTYTGLACLVLLGDDLSRVNKEACLMGLKALQLEDGSFY 158          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3031.8220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Q8_ECTSI2.140e-3544.62Geranylgeranyltransferase type 1 beta n=1 Tax=Ecto... [more]
A0A7S2WN64_9STRA1.110e-2136.78Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A7S3ANB8_9EUKA1.850e-1832.51Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
UPI001129166A2.590e-1835.71geranylgeranyl transferase type-1 subunit beta iso... [more]
UPI001B8891F42.410e-1731.09geranylgeranyl transferase type-1 subunit beta-lik... [more]
A0A433DGS2_9FUNG1.060e-1633.51Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A433Q939_9FUNG1.400e-1633.51Terpenoid cyclases/protein prenyltransferase alpha... [more]
A0A0M0JLL5_9EUKA1.410e-1635.94Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A6Q2WQC5_ESOLU2.280e-1634.52Geranylgeranyl transferase type-1 subunit beta n=4... [more]
UPI001EAF702B2.780e-1631.47geranylgeranyl transferase type-1 subunit beta-lik... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11774:SF4GERANYLGERANYL TRANSFERASE TYPE-1 SUBUNIT BETAcoord: 4..207
NoneNo IPR availablePANTHERPTHR11774GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNITcoord: 4..207
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 3..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3031contigH-paniculata_contig3031:10418..19141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3031.8220.1mRNA_H-paniculata_contig3031.8220.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3031 10297..19245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3031.8220.1 ID=prot_H-paniculata_contig3031.8220.1|Name=mRNA_H-paniculata_contig3031.8220.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=237bp
MVDLNWDAHAGLFLRSLVGPGMPKQYTGADTSRVTLAYFCVVGLDLLGKL
NTCSKAHREAVRDWVLAQQVVSTGPGRPGENERRCGFRGGPYTVNRSNLD
EQTRVRAGSQERKTCDLQCAEKTDEAGAASYSQTPSLDNEALAVDEGIQF
PYMDEGHLAMTYSALATLSTLGDDLASVDSEATVRAIAALQREDGRCYWR
AREGKETGQHECLASSWCEHRYCKCGRFENRHGWRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008930Terpenoid_cyclase/PrenylTrfase