prot_H-paniculata_contig303.8216.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig303.8216.1
Unique Nameprot_H-paniculata_contig303.8216.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length896
Homology
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BLAST of mRNA_H-paniculata_contig303.8216.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.760e-7
Identity = 35/73 (47.95%), Postives = 38/73 (52.05%), Query Frame = 0 
Query:   15 NKDSTVELRRSCDYCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPAKGTKYAPRRKRSAIAEWADRAAAA 87
            ++D TVELR+SCDYC                              SGPAKGTKYAPRRKRS IAEWADR   A
Sbjct:    3 HQDPTVELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTGGA 75
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BLAST of mRNA_H-paniculata_contig303.8216.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.770e-7
Identity = 34/72 (47.22%), Postives = 38/72 (52.78%), Query Frame = 0 
Query:   16 KDSTVELRRSCDYCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPAKGTKYAPRRKRSAIAEWADRAAAA 87
            +D T+ELR+SCDYC                              SGPAKGTKYAPRRKRS IAEWADR + A
Sbjct:   12 RDPTIELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTSGA 83
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig303.8216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L009_9PHAE1.760e-747.95Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FPF9_ECTSI1.770e-747.22Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 18..84
e-value: 3.9E-5
score: 25.5
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 20..58
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 25..54
score: 8.533

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig303contigH-paniculata_contig303:2509..38879 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig303.8216.1mRNA_H-paniculata_contig303.8216.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig303 1232..38879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig303.8216.1 ID=prot_H-paniculata_contig303.8216.1|Name=mRNA_H-paniculata_contig303.8216.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=896bp
MREPGDSDTERGAPNKDSTVELRRSCDYCVRLKRACDGKSPCTLCSRRKK
PCTRSARKKSGPAKGTKYAPRRKRSAIAEWADRAAAATVDVGRFGDPGQP
PPPHDPPPPGRGGVLGEGMGIGGGRGGRQTSSLSPSLLAGSSMSPMSFLG
HSRTLSAGAIKEESPGGSRGRGAPQHHRREDFGAPSASHSPPRGRGGGGA
EPFRGEHFARQQEIGLPLVAARRRAPHSDRASSPGGVMGHPRSPRGAGLS
AGSLAQLQPREHRQQHYHGGSPSAWTSWEATSRPGLSQLEATAAAAVEAA
AAAGGQASEGQGSFALSAASATSSRAPGSFVSMPGASTVDVGGGNPRRVM
MPPLDWERLSSPPSEALVGPGAGPGHGGRIQLPSPSIRPYSLYGQNPDER
DLSSIPPRFSAIGGSSGGVGVSRSPQRDHRGREGGDDHGPEVSSLSLGFR
PSPREPSDPTAGFSFRPSPQLLRWRRSPQSLSRELHMSGRGEPLQYARRG
PRGRSLERDDPIPGGGGGWGGEAVGGIGGDDGDRQRRWTTGMQEERGGDV
EWRQSRQRLPPPPRAVPRPPPPPPPPYDYHHRRGDWRPYGGGGGGAGAGA
GGRSGSGGDASEGRYYSSSSTMAPARIEGRGGEPPDEVAVRTYERQQRAD
ERPDNRALFFGRGGEGFTSEGGGGSGSGGGGDGTQDRRMGDDDTQWRPLD
SRHQGRQDRGFEHPSNKRALSPSRQSGEPGAEAPRTEDEQQGQRTGGGGG
GRGSSVAGHWDMKERDDRRVRRASTDVVRGSSSGKPSGKIGEAGSSAALR
GYLESETPGKHSDGSPASQGSRSDRRSSMEVSLRPSPASASASAQGSEGG
GDRQEEWAGRRRGEARIESILSPMALPPTGAGSPGGGGGGGGEEGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd