|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 975 |
| Cds size | 519 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11286.821.1 >prot_H-paniculata_contig11286.821.1 ID=prot_H-paniculata_contig11286.821.1|Name=mRNA_H-paniculata_contig11286.821.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MVGDFAVSQTPGYDILPEKLGGRGSSLEEAPASGEEKSGIPVAMNRRGVD
FSQDKKLMESLRRDMREASPKDPWSRLNLAHALEAEGESFLAAGNFQASS
LAHSEAAMLFRESSALVARKDKARLLLRQWVNARRAREDDGRSKQPDIKV
LVQCIDEMLRGMSTHSQASQQA* back to topmRNA from alignment at H-paniculata_contig11286:64..3438+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig11286.821.1 ID=mRNA_H-paniculata_contig11286.821.1|Name=mRNA_H-paniculata_contig11286.821.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3375bp|location=Sequence derived from alignment at H-paniculata_contig11286:64..3438+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAACTCCAACAATCGGATCAAGATGAATCCCGCAGACTTCCAAGCAAGGA
CTGACGTCGGGGGTTGTACGAGAGGATACATATACGCGCGGAGCAGAAAA
ATGTCGCAAGCAGCATTTTGTTTGTTGTAGCGTGCTCAACTTGACTTTTA
GCTGTCAACTACGATCCACGTGTTCGTCATTCTTACATAGGTACCGGCAC
AAATCGTTCCCGAATCGGCAACAACAAAATCTATTTCGTCCCCTTCGATG
GTTGGGGATTTCGCAGTCTCTCAGACACCGGGGTATGACATCCTTCCTGA
GAAGCTGGGAGGGCGTGGAAGTTCGCTGGAGGAGGCGCCTGCAAGCGGCG
AAGAGAAATCAGGGATCCCAGTAGCAATGAATCGACGCGGTGTTGACTTT
TCTCAAGACAAAAAGTTGATGGAGAGCCTGCGGAGAGATATGCGAGAAGC
ATCACCTAAAGATCCTTGGTCTAGGTGGGATTTTCTATCATGCGGGGTTT
ATCCTGTTCGTCATGTCCTAAACTTCGTAATTCAAAATGTGTTGACAAAG
TTGTCTGTAGATGTTGCACTATTGAGACGCCGGTTCACGACATGTTGCTA
TATATTGATTGGGTAGATGGTCTGATCTCCGAAGGACGCATTAGTTGGAC
ATTATCTTTAAAACGTGTTGAATCGTGCTTCCACCGCGACTATCCAGTAT
TCCGTCCCAAATACTCCAGAACTCGACAGTTCCTCTACGTGCTAGTAGAG
ACAAATACAACGCCCTTCATGGATATTCTAATTTCTCCCCAAAATACCGC
TGGGTTACAGGCTGAACTTGGCGCATGCCCTGGAAGCGGAAGGAGAGTCA
TTCTTAGCTGCAGGAAATTTCCAGGCCAGTTCATTGGCCCACTCGGAGGC
AGCTATGCTATTCCGGGAGTCTTCTGCCTTAGTTGCACGGAAAGATAAAG
CACGCCTACTCCTTCGACAGTGGGTTAACGCAAGGCGGGCTCGTGAGGTA
TGTGGCCTTGATATTTTCCAACCATGGGGAGAGAAGGAGTAGAGGGCGGG
GAGTCCTGAGTCTGAATTTTAACCCACATATCGATTGAACCCGCCTGGTC
TCAAGTCAGAGACAGGCAGGGGAGCTATTTCACGCTGAAAACATGTGTCG
GAGAAGTCACCTAACATATATTCATATTAATATGTTCTCTGTTTCGTTAT
GCCAGGATGACGGCAGGAGTAAACAACCAGATATCAAGGTACTGGTTCAG
TGTATCGATGAGGTGAGATGGTGATAGCTGTGACGATTGCTGAATAAGGG
AGGGGGTGGTACATTTTCATTTGGCAATCAAAATCTTCCGAATTAAAGCT
GGAATGACGTAGTTGCCCTACAGCTTTGGCTGTTTGCTAGTCCCGGCGAA
TACCAGAGGACTGCCAAGCCCTTCCAGGAACAGGAAAGTAAGGAATTGCT
CTTGGCGTTTTTTCGTGTGCAAACAAACGGAGGATATATTGTACTTGGCT
ATGATAGGTGCACTATATTGTAATCTGACAATAGCAATACCTATGTGCTT
CACAGCACGATACCCCCCCTTTACGAGAAAAAATGGTCTTCCTCTCATCT
ACCTTTCGCACCCCGTAAGCAGATCAAGTTTCCTGCATGTAGATGAGAGA
AAAATACTGTAGCATCCCAAGAAGTGAGCCCGCGGAATACAAATCACTGT
ACTCTGAACATTCATGGGGAGTGCAAAACCCTGAAATCCTTTATAGCAGA
AACGTTTACGTTTGCAACGTAACGAGGTAGAAGAACGGGTTATAGGCTAA
TGATATCCAGTAAGGCCATGGTGGTTGGTTTACGAATATCCAGCGAGAAT
TTGCGCATTAACTTACAGTTGTGGCAAGGCTCGTTCCAAACGTTGCCACT
TTTCTATTTTTTTCGTATCTCTTCTCCATTTTCTTTTTTTCAGTCGGGGG
GCTATAACGCGCCGAGAATATATCGAAGAATATACTTTTATCGTTCATCG
GAAAGAACGCCTGAACGCAAAAAGCTCACCTGCTCATTTCCGAAATTTCG
AAATTTCGAAATTTCGATTTTTTTTAAAAGAGAGAGAGCAAAACGACGAG
AAAGGAGAAAAAATAGTGGCAACCTTTAAAACGGCCCTACCAACGTTTAG
AATAGCTCTACCATACTTTCCGTTACAAAAATCTCCCTCTCAAAGAGAAG
ATGGGACCAATTGCAAACTTTTGTACTATTCCCCCGCTTTATCGTTCCAC
TACTCCGCTCCACTTGGGGTGCTACGAAATTACACTTTTGATAGGCGTGT
AGACGGTCTACTGGGACGAATAACAACTGTGACCAGCGCAAACATGATGA
TAGGACAACGCACAATCACAGTTCCGGAAAGTCCCGCGAATGCCTTTGTC
TAGGCGAGGAACTGTGTCACGAGGCCAACCTGGAGCTCGTTGAGGCCTTG
CTCGAGCGGGGGCAACTCCAAAGGTAGCTAGCTAGCTCTATTGGTCAGGT
GGCTTGGCCTAGTTGCCTGCGCCAAGAACCACTGGGGGTTAGTTGTCACA
TGCTCCCAAATGAATCCAACGAAATGGATTGCCGGCAGCTTAACTGACCT
AGGCAGGGTGTGACCTACGCCGATTGGATGGATTATTCCTTCGTGCCATG
ACGCCGTTTAGGTCACAACACAATCAATCGCAACGGTTGAGATTTTACAA
GCGGAGAACATCGTTCATCCATGATATTATCTAAAAGAGGGATTGCATTT
CACGGTAATCTTGGACTCTTGGTGTGCACCGTTGTTGCTACCTCTTGCTC
ACACATTTTCCCTCATCGATTGCGGCAAATTGCTTAAACTGTGGGTGTGT
TGATCTATGACATCATGCACCAAGTACATGAAGGCAACGGTATTCACTTC
TAGATATCCATCGTCTTTGCTCATTGCAACGCCAAATGGATGGATGAACC
AGGTCACGCCCGATACCAGACAGATAGACAAGATTTCTTAGCGTAGCTGG
CATATACTAAATTGTCACGGACGTGTGTCTCGACAATTCTCTTGATACGA
AAATCAACCTTTCCTGAGTTCATGACTCATTTCCCCCCCAAATGTCCAAC
GCCTTTCTTGTTTCCTAGATGCTGCGAGGCATGTCGACACATTCTCAAGC
ATCACAACAGGCATGATGAAGAAGCCCTTTATAGCCTTGCACAGGCGCTG
GAAGCGCAAGGAAACTCCCAACAGGCACGCGAATGCGCAAGAGAACTAGA
CGGCATTGCCCAGAGAAGGCGCTCGGATTGAACGCCAACAATAGCTAAGG
ACGGAAGCAACGTGTCCCCACCAAATGAAGACGATGGGACATGCCCTGTT
TTGTAGTCGGACGCCCGGTGGGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig11286:64..3438+ >mRNA_H-paniculata_contig11286.821.1 ID=mRNA_H-paniculata_contig11286.821.1|Name=mRNA_H-paniculata_contig11286.821.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at H-paniculata_contig11286:64..3438+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTGGGGATTTCGCAGTCTCTCAGACACCGGGGTATGACATCCTTCC
TGAGAAGCTGGGAGGGCGTGGAAGTTCGCTGGAGGAGGCGCCTGCAAGCG
GCGAAGAGAAATCAGGGATCCCAGTAGCAATGAATCGACGCGGTGTTGAC
TTTTCTCAAGACAAAAAGTTGATGGAGAGCCTGCGGAGAGATATGCGAGA
AGCATCACCTAAAGATCCTTGGTCTAGATGGTTGGGGATTTCGCAGTCTC
TCAGACACCGGGGTATGACATCCTTCCTGAGAAGCTGGGAGGGCGTGGAA
GTTCGCTGGAGGAGGCGCCTGCAAGCGGCGAAGAGAAATCAGGGATCCCA
GTAGCAATGAATCGACGCGGTGTTGACTTTTCTCAAGACAAAAAGTTGAT
GGAGAGCCTGCGGAGAGATATGCGAGAAGCATCACCTAAAGATCCTTGGT
CTAGGCTGAACTTGGCGCATGCCCTGGAAGCGGAAGGAGAGTCATTCTTA
GCTGCAGGAAATTTCCAGGCCAGTTCATTGGCCCACTCGGAGGCAGCTAT
GCTATTCCGGGAGTCTTCTGCCTTAGTTGCACGGAAAGATAAAGCACGCC
TACTCCTTCGACAGTGGGTTAACGCAAGGCGGGCTCGTGAGGCTGAACTT
GGCGCATGCCCTGGAAGCGGAAGGAGAGTCATTCTTAGCTGCAGGAAATT
TCCAGGCCAGTTCATTGGCCCACTCGGAGGCAGCTATGCTATTCCGGGAG
TCTTCTGCCTTAGTTGCACGGAAAGATAAAGCACGCCTACTCCTTCGACA
GTGGGTTAACGCAAGGCGGGCTCGTGAGGATGACGGCAGGAGTAAACAAC
CAGATATCAAGGTACTGGTTCAGTGTATCGATGAGGATGACGGCAGGAGT
AAACAACCAGATATCAAGGTACTGGTTCAGTGTATCGATGAGATGCTGCG
AGGCATGTCGACACATTCTCAAGCATCACAACAGGCATGAATGCTGCGAG
GCATGTCGACACATTCTCAAGCATCACAACAGGCATGA back to top
|