mRNA_H-paniculata_contig3027.8209.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3027.8209.1
Unique NamemRNA_H-paniculata_contig3027.8209.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3027.8209.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.310e-37
Identity = 89/197 (45.18%), Postives = 112/197 (56.85%), Query Frame = 3 
Query:  399 GCWTDDKENRVLSEASLMG-NLEMTTENCATECIGSVYFGTEYGGECFCGASTDNPAEFGGSTACTMPCTGDSSQICGGRNAINVFKFTD-----------------YIGEGCFVDDTETPVLSAAAYEEVG--MTTDRCAELCDEYPVFGTESGTKCFCGLSTDVPDELGDSSGCTIACPGAPAETCGGLNAISVF 929
            GC+ D  + RVLS  S+M  N  MTT  CA  C GS YFG ++G ECFC +S D P E G S  C M C+GDSS+ICGG  AI V++++D                 Y   GCFVDD+   VLS  +   +   MT   CA+ C+    FGTE   +CFC  S D PDELG++S C + C G  +ETCGG NAI V+
Sbjct:  181 GCYVDSPD-RVLSGDSMMSVNSVMTTAYCADFCEGSDYFGVQFGYECFCSSSGDTPDELGESEDCEMACSGDSSEICGGSYAIQVYEYSDXXXXXXXXXXXXXXXXXYESVGCFVDDSSDRVLSGDSMLSINSVMTAAYCADFCEGSTYFGTEYAFECFCSSSGDSPDELGEASNCDMTCSGDSSETCGGFNAIQVY 376
[Close]
BLAST of mRNA_H-paniculata_contig3027.8209.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 7.670e-37
Identity = 75/186 (40.32%), Postives = 111/186 (59.68%), Query Frame = 3 
Query:  393 SLGCWTDDKENRVLSEASLMGNLEMTTENCATECIGSVYFGTEYGGECFCGASTDNPAEFGGSTACTMPCTGDSSQICGGRNAINVFKFTDYIGE----GCFVDDTETPVLSAAAYEEVGMTTDRCAELCDEYPVFGTESGTKCFCG-LSTDVPDELGDSSGCTIACPGAPAETCGGLNAISVFSF 935
            +LGC+ DD+E R++ +  ++ +  MTTE C   C+GS YF T+YG EC+CG+   + A  G ST CT PC+GD+ Q+CGG +A NV+ FT         GC+ D+++  ++  A  +   MT + C   C     FG + GT+CFCG  STD+    G+S+ C   CPG   + CGG  A+SV+S+
Sbjct:   95 ALGCYGDDREARIMDDL-VLSDSSMTTELCELTCLGSTYFATQYGRECWCGSDGADYALHGESTECTYPCSGDADQLCGGFDAANVYLFTGETSTSSLVGCYQDESDARIMEFALTDTSSMTMEMCEAECSGNTYFGMQYGTECFCGGESTDLLQH-GESTACDYECPGDSEQVCGGFYAMSVYSY 278
[Close]
BLAST of mRNA_H-paniculata_contig3027.8209.1 vs. uniprot
Match: D7FTD7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD7_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 6.660e-35
Identity = 73/186 (39.25%), Postives = 109/186 (58.60%), Query Frame = 3 
Query:  393 SLGCWTDDKENRVLSEASLMGNLEMTTENCATECIGSVYFGTEYGGECFCGASTDNPAEFGGSTACTMPCTGDSSQICGGRNAINVFKFTDYIGE-----GCFVDDTETPVLSAAAYEEVGMTTDRCAELCDEYPVFGTESGTKCFCGLSTDVPDELGDSSGCTIACPGAPAETCGGLNAISVFSF 935
            +LGC+ DD+E+R++ + +L  +  MTTE C   C+GS YF T+YG EC+CG++  + A  G ST CT  C GD+ Q CGG +A NV+ +TD         GC+ D++ + ++  A  +   M+ + C   C     FG + G +CFCG S+    E G+SS C   CPG   + CGG  A+SV+S+
Sbjct:  206 ALGCYGDDREDRIMDDLAL-SDYSMTTELCELTCLGSTYFATQYGRECWCGSADMDYALHGESTDCTYACAGDADQTCGGFDAANVYSYTDESTAISAFVGCYQDESGSRIMELALTDSSSMSMEMCEAKCRGNTYFGLQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAMSVYSY 390
[Close]
BLAST of mRNA_H-paniculata_contig3027.8209.1 vs. uniprot
Match: D7FUE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE6_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 9.910e-34
Identity = 73/186 (39.25%), Postives = 109/186 (58.60%), Query Frame = 3 
Query:  393 SLGCWTDDKENRVLSEASLMGNLEMTTENCATECIGSVYFGTEYGGECFCGASTDNPAEFGGSTACTMPCTGDSSQICGGRNAINVFKFTDYIGE-----GCFVDDTETPVLSAAAYEEVGMTTDRCAELCDEYPVFGTESGTKCFCGLSTDVPDELGDSSGCTIACPGAPAETCGGLNAISVFSF 935
            +LGC+ DD+E+R++ + +L  +  MTTE C   C+G+ YF T+YG EC+CG++    A  G ST CT  C GD+ Q CGG +A NV+++TD         GC+ D+++  ++  A  +   MT + C   C     FG + G +CFCG S+    E G+SS C   CPG   + CGG  A+SV+S+
Sbjct:  633 ALGCYEDDREDRIMDDLAL-SDYSMTTELCEQTCLGNTYFATQYGRECWCGSAGVEYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTSSFVGCYQDESDARIMELALTDSSSMTKEMCEAECTGNTFFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAMSVYSY 817
[Close]
BLAST of mRNA_H-paniculata_contig3027.8209.1 vs. uniprot
Match: D7FRS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS2_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 4.350e-33
Identity = 72/187 (38.50%), Postives = 109/187 (58.29%), Query Frame = 3 
Query:  393 SLGCWTDDKENRVLSEASLMGNLEMTTENCATECIGSVYFGTEYGGECFCGASTDNPAEFGGSTACTMPCTGDSSQICGGRNAINVFKFT--DYIGE----GCFVDDTETPVLSAAAYEEVGMTTDRCAELCDEYPVFGTESGTKCFCGLSTDVPDELGDSSGCTIACPGAPAETCGGLNAISVFSF 935
            SLGC+ DD+ENR++ + +L  +  MTTE C   C+G+ +F T+YG EC+CG++  +    G ST CT  C GD+ Q CGG +A NV+ +T  D +      GC+ D+++  ++  A  +   MT + C   C     FG + G +CFCG S+    + G+S+ C   CPG   E CGG  A+SV+S+
Sbjct:  328 SLGCYEDDRENRIMDDLAL-SDFSMTTELCEQTCLGNTFFATQYGRECWCGSAGADYTLHGESTDCTYACAGDADQTCGGFDAANVYLYTGDDALSTSTFVGCYQDESDARIMELALTDSSSMTKEMCEAECTGSTYFGMQYGRECFCGGSSTDLLQHGESTACDYECPGDSDELCGGFYAMSVYSY 513
[Close]
BLAST of mRNA_H-paniculata_contig3027.8209.1 vs. uniprot
Match: D7FUE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE8_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 8.120e-32
Identity = 65/164 (39.63%), Postives = 96/164 (58.54%), Query Frame = 3 
Query:  465 MTTENCATECIGSVYFGTEYGGECFCGASTDNPAEFGGSTACTMPCTGDSSQICGGRNAINVFKFTDYIGE-----GCFVDDTETPVLSAAAYEEVGMTTDRCAELCDEYPVFGTESGTKCFCGLSTDVPDELGDSSGCTIACPGAPAETCGGLNAISVFSFYA 941
            MTTE C   C+GS YF T+YG EC+CG++  + A  G ST CT  C G++ Q CGG +A NV+++T+         GC+ D+++  ++  A  +   MT + C   C     FG + G++CFCG S+    E G+SS C   CPG   + CGG  A+SV+S+Y+
Sbjct:    1 MTTELCELTCLGSTYFATQYGRECWCGSAGMDYALHGESTDCTYGCAGNADQTCGGFDAANVYRYTNESTPTSSFVGCYQDESDARMMELALTDSSSMTKEMCEAECTGNRYFGMQYGSECFCGGSSTNLLENGESSACDYECPGDSEQECGGFYAMSVYSYYS 164
[Close]
BLAST of mRNA_H-paniculata_contig3027.8209.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 9.410e-32
Identity = 72/187 (38.50%), Postives = 109/187 (58.29%), Query Frame = 3 
Query:  393 SLGCWTDDKENRVLSEASLMGNLEMTTENCATECIGSVYFGTEYGGECFCGASTDNPAEFGGSTACTMPCTGDSSQICGGRNAINVFKFT-DYIGE-----GCFVDDTETPVLSAAAYEEVGMTTDRCAELCDEYPVFGTESGTKCFCGLSTDVPDELGDSSGCTIACPGAPAETCGGLNAISVFSF 935
            SLGC+ DD+E+R++ + +L  N  MTTE C   C+G+ YF T+YG EC+CG++  +    G S  CT  C GD+ Q CGG +A NV+ +T D +       GC+ D+++  ++  A  +   MT +RC   C     FG + G +CFCG S+    + G+S+ C   CPG   + CGG  A+SV+S+
Sbjct:  743 SLGCYEDDREDRIMDDLALSDNA-MTTELCEQTCLGNTYFATQYGRECWCGSAGADYILHGESADCTYACAGDADQTCGGFDAANVYLYTGDDVPTTSSFVGCYQDESDARIMELALTDSSSMTKERCEAECTGNTYFGMQYGRECFCGGSSTDLLQHGESTSCDYECPGDSDQVCGGFYAMSVYSY 928
[Close]
BLAST of mRNA_H-paniculata_contig3027.8209.1 vs. uniprot
Match: A0A0U5G9D0_ASPCI (Uncharacterized protein n=1 Tax=Aspergillus calidoustus TaxID=454130 RepID=A0A0U5G9D0_ASPCI)

HSP 1 Score: 125 bits (315), Expect = 1.000e-28
Identity = 77/197 (39.09%), Postives = 107/197 (54.31%), Query Frame = 3 
Query:  384 YVWS-LGCWTDDKENRVLSEASLM-GNLEMTTENCATECIGSVYF--GTEYGGECFCGASTDN---PAEFGGSTACTMPCTGDSSQICGGRNAINVFKFTD-YIGEGCFVDDTETPVLSAAAYEEVGMTTDRCAELCDE--YPVFGTESGTKCFCGLSTDVPDELGDSSGCTIACPGAPAETCGGLNAISVFSFYAD 944
            Y W+ LGC+TD+   R L+ + L+ GN   T   C   C G+ +   G EYG +CFCG +  N   P   GG+  C +PC GDS+QICGG +A+N++     +   GC+ D T    L A +Y   G + +RC   C    Y   G E GT+CFCG S D    L  S+ C   CPG  A+TCGG NA+S++  + +
Sbjct:   89 YSWTDLGCYTDNTNARTLNTSILVSGN---TVPKCQAACSGAGFTLAGVEYGSQCFCGTAILNGGVPITTGGT--CNIPCAGDSAQICGGSDALNLYSLIPVWQSIGCYSDSTLKRTL-AVSYNVAGNSVERCTAACQAGGYEYAGMEFGTQCFCGNSIDNGATL--SAACATKCPGNAAQTCGGPNALSIYQLFGN 277
[Close]
BLAST of mRNA_H-paniculata_contig3027.8209.1 vs. uniprot
Match: A0A0F4ZFK6_9PEZI (Uncharacterized protein n=1 Tax=Thielaviopsis punctulata TaxID=72032 RepID=A0A0F4ZFK6_9PEZI)

HSP 1 Score: 130 bits (327), Expect = 3.090e-28
Identity = 69/189 (36.51%), Postives = 97/189 (51.32%), Query Frame = 3 
Query:  396 LGCWTDDKENRVLSEASLMGNLEMTTENCATECIGSVYFGTEYGGECFCGASTDNPAEFGGSTACTMPCTGDSSQICGGRNAINVF-----------KFTDYIGEGCFVDDTETPVLSAAAYEEVGMTTDRCAELCDEYPVFGTESGTKCFCGLSTDVPDELGDSSGCTIACPGAPAETCGGLNAISVF 929
            LGC+  +   RVL   +L     MT E C   C+G +YFGTEYG EC+CG   + P     +T C+M C GD  Q+CGG + + V+               Y  +GC+ D     VL+ + Y +  MT + CA  C  Y  FG E GT+C+CG S      +   + CT+ C G  +ETCGG + IS++
Sbjct:  168 LGCF-QEAATRVLPNRAL-AQANMTAEICLANCVGYLYFGTEYGNECWCG--NNKPDLLADATDCSMVCAGDDEQLCGGPDRLTVYGPQAIKQDTLPSIAGYAYQGCYSDSATARVLTGSFYYDEAMTLEMCATDCSLYEYFGVEYGTQCYCGTSVSNTSAIMPPTSCTMTCGGNSSETCGGSDRISLY 352
[Close]
BLAST of mRNA_H-paniculata_contig3027.8209.1 vs. uniprot
Match: A0A8H8CQS6_PSICU (Uncharacterized protein n=1 Tax=Psilocybe cubensis TaxID=181762 RepID=A0A8H8CQS6_PSICU)

HSP 1 Score: 128 bits (321), Expect = 1.030e-27
Identity = 72/193 (37.31%), Postives = 105/193 (54.40%), Query Frame = 3 
Query:  390 WS-LGCWTDDKENRVLSEASLMGNLEMTTENCATECI--GSVYFGTEYGGECFCGASTDNPAEFGGSTACTMPCTGDSSQICGGRNAINVFKFTD-------YIGEGCFVDDTETPVLSAAAYEEV-GMTTDRCAELCDE--YPVFGTESGTKCFCGLSTDVPDELGDSSGCTIACPGAPAETCGGLNAISVF 929
            WS +GC++D  + R L  A+      MT E+C   C+  G  Y G E+  EC+C  + ++P     ++AC+MPCTG+S +ICGG NAIN+F+ T        +   GCF D T++  L  A++ +V GMT + C E C    Y   G E   +C+C    + P     +S C+  C G+  E CGG NA+SVF
Sbjct:   41 WSAIGCFSDSTDARTLRTAAFTDVTGMTIESCLAFCVPAGYKYAGVEFSRECYCDNNIESPGAPIDASACSMPCTGNSGEICGGSNAINIFQSTPAPPLPSGWEAVGCFSDSTDSRTLRVASFTDVTGMTIESCLEFCTPAGYKYAGLEFARECYCDNVIESPGAPIAASSCSTLCTGSGVEICGGSNALSVF 233
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3027.8209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC73_ECTSI1.310e-3745.18Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D8LEL0_ECTSI7.670e-3740.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTD7_ECTSI6.660e-3539.25WSC domain containing protein n=1 Tax=Ectocarpus s... [more]
D7FUE6_ECTSI9.910e-3439.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRS2_ECTSI4.350e-3338.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUE8_ECTSI8.120e-3239.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRS1_ECTSI9.410e-3238.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0U5G9D0_ASPCI1.000e-2839.09Uncharacterized protein n=1 Tax=Aspergillus calido... [more]
A0A0F4ZFK6_9PEZI3.090e-2836.51Uncharacterized protein n=1 Tax=Thielaviopsis punc... [more]
A0A8H8CQS6_PSICU1.030e-2737.31Uncharacterized protein n=1 Tax=Psilocybe cubensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3027contigH-paniculata_contig3027:11603..18625 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score148.3
Seed ortholog evalue5.7e-33
Seed eggNOG ortholog2880.D8LEL0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1839
Cds size888
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3027.8209.1prot_H-paniculata_contig3027.8209.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3027 12492..18563 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929929.996987-UTR-H-paniculata_contig3027:11602..124911622929929.996987-UTR-H-paniculata_contig3027:11602..12491Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3027 11603..12491 -
1691481074.0267286-UTR-H-paniculata_contig3027:11602..124911691481074.0267286-UTR-H-paniculata_contig3027:11602..12491Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3027 11603..12491 -
1622929930.1203601-UTR-H-paniculata_contig3027:18563..186251622929930.1203601-UTR-H-paniculata_contig3027:18563..18625Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3027 18564..18625 -
1691481074.1245286-UTR-H-paniculata_contig3027:18563..186251691481074.1245286-UTR-H-paniculata_contig3027:18563..18625Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3027 18564..18625 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929930.0167608-CDS-H-paniculata_contig3027:12491..126321622929930.0167608-CDS-H-paniculata_contig3027:12491..12632Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3027 12492..12632 -
1691481074.0387094-CDS-H-paniculata_contig3027:12491..126321691481074.0387094-CDS-H-paniculata_contig3027:12491..12632Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3027 12492..12632 -
1622929930.0359404-CDS-H-paniculata_contig3027:13176..132331622929930.0359404-CDS-H-paniculata_contig3027:13176..13233Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3027 13177..13233 -
1691481074.057393-CDS-H-paniculata_contig3027:13176..132331691481074.057393-CDS-H-paniculata_contig3027:13176..13233Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3027 13177..13233 -
1622929930.0553753-CDS-H-paniculata_contig3027:13488..137071622929930.0553753-CDS-H-paniculata_contig3027:13488..13707Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3027 13489..13707 -
1691481074.0694437-CDS-H-paniculata_contig3027:13488..137071691481074.0694437-CDS-H-paniculata_contig3027:13488..13707Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3027 13489..13707 -
1622929930.0737123-CDS-H-paniculata_contig3027:14553..146101622929930.0737123-CDS-H-paniculata_contig3027:14553..14610Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3027 14554..14610 -
1691481074.083873-CDS-H-paniculata_contig3027:14553..146101691481074.083873-CDS-H-paniculata_contig3027:14553..14610Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3027 14554..14610 -
1622929930.0903313-CDS-H-paniculata_contig3027:16231..164371622929930.0903313-CDS-H-paniculata_contig3027:16231..16437Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3027 16232..16437 -
1691481074.0929792-CDS-H-paniculata_contig3027:16231..164371691481074.0929792-CDS-H-paniculata_contig3027:16231..16437Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3027 16232..16437 -
1622929930.1086135-CDS-H-paniculata_contig3027:18355..185631622929930.1086135-CDS-H-paniculata_contig3027:18355..18563Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3027 18356..18563 -
1691481074.1044745-CDS-H-paniculata_contig3027:18355..185631691481074.1044745-CDS-H-paniculata_contig3027:18355..18563Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3027 18356..18563 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3027.8209.1

>prot_H-paniculata_contig3027.8209.1 ID=prot_H-paniculata_contig3027.8209.1|Name=mRNA_H-paniculata_contig3027.8209.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=296bp
MLVGCEDQVNTPIPNMWQGPVRLVHLESFTRPSHPHTSTHPHFTPHSLPL
TCWSKLQHHYCIFVAVGRTAATNTQMKPSYKELLVAGSLFCRASVARNLQ
DVSDVGHYVWSLGCWTDDKENRVLSEASLMGNLEMTTENCATECIGSVYF
GTEYGGECFCGASTDNPAEFGGSTACTMPCTGDSSQICGGRNAINVFKFT
DYIGEGCFVDDTETPVLSAAAYEEVGMTTDRCAELCDEYPVFGTESGTKC
FCGLSTDVPDELGDSSGCTIACPGAPAETCGGLNAISVFSFYADS*
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mRNA from alignment at H-paniculata_contig3027:11603..18625-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3027.8209.1 ID=mRNA_H-paniculata_contig3027.8209.1|Name=mRNA_H-paniculata_contig3027.8209.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7023bp|location=Sequence derived from alignment at H-paniculata_contig3027:11603..18625- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTGTCTGTGGAGTGGTGCAGGCAAACGCACCTGCCTCCGAGAGGAGACT
GATATTTCTGTGATGCTTGTGGGATGTGAGGATCAAGTCAATACCCCGAT
TCCTAATATGTGGCAAGGACCTGTCCGACTGGTACATCTCGAAAGTTTCA
CCCGCCCCTCACATCCTCACACGAGCACACACCCACACTTCACACCGCAC
AGTCTTCCTCTCACCTGCTGGAGCAAACTGCAGCATCACTATTGTATCTT
CGTGGCGGTTGGCAGAACAGGTATAGTTGGCCGGCATATATTGTTGCACC
CTACATGCGAATAACGTTTGGATTACTCGTCGCTATCTTCATGTCACTTG
TTTAGTTGGAAATACCAATCTTGAGTATATGCGAGTATCCGCGTGTGTGC
GTGTAAAGTGGCACCGCTGACGGTCCGCCCAGATGCTGCTAGGGTAGTTC
GAAAGCCAGGTGTATCAGCTATCACGTTTGACGGCGAAGGACAAGGCTAC
TCTGGTTGCACTGATGAGGAGCATGTGGCTATTTCTAGTATACGTGCTGC
CAGTTCAAGTCCTTCTTGTCACACGCATGGATGTGGGCGATAGATCGATA
CATGGGTAATGGGTACGGAACCGTCTGGTTGTACAATAAGGTGTAATACT
CGAGGACTTGAAAAATACCCCGATGCTACGATCTATGTTGCCGGCCCAAA
TATACACGGGAATTGTACGCCGATACAGAGAGATATCGGAGGTATTGCAC
TTTGTTTTATCCCATCTAAATATGTACTACTGCCTAGAGGACCCGATGAG
CGGAAGAGATCATCTGCACGGCACAAGACTCTAGACCCGCACCTACGAAG
TAGTGAGAAAAGAAAAAGATAGCCGCAATTTTTCTATTGGCCAATTTTTG
CTAATGGAAGATTCTGATGGTTGTAAATATAAAATGTTGAATGTTGGCCT
CATGATGATGGCTCAACAGCAAAGCACCCTCTCGCTTTTTGTGGCATTAT
CTTGCGCCCTGTACCACTCTACAGAAAAAAATGTGTTCTAAAAGTTTAAG
ATGATTTTTTTCTTTAGGATGAACATGTTTTCAAGATTTTCCCGATATTA
CCTGCCGAATCAAGCATGACTCGAACAGAGTCGGTGAAAGTAGATGGCAT
CAGCGTTCGTTGGATCTTGACGTTTTTCATCTTGGGTCCTATGTTCCCGA
GATATGTGCATGCAAAGCAACAATCTAATAGCCGTTCACGATTCTCCTTG
ATTCTGCTGTTTTGCCCTACAGTATATCTTAAGATTCCCTGATTCCCATT
TTATCGAAAGTAGACGCGTTCTATCCCTAACAGAGTGTTCGTGAGATGGA
GAATCTATTTTCAAGAAGAGAACGGGGATATTTTGAAACCGTCCTGCAGT
CCACCGATCAGGGACTATAGAGAAGAATATTTCAGGCTCATTAAGTTTTG
GGAATGGGATATATTGCGCAAATTATAACTCAGCTCTTCTTATTCTAATG
AAAAAAGCCGTCCCAAAATTGTAGTACACACTGTTACAGGCACTTCAGGG
TCATTTCTAGCAGAGGGGAAATTTCAGAAATACCGGAAATTTCAGAATTT
CAAGCCGTCAAATGAGAGCCAAAATATGCTCCAAAATATGAAATAAAAAA
AGGAAACAAACACACACATTTGCAGAAATGATTACGAAAACGAAAGTTCG
CAGCTGTTTGAGGTATATTCTAGCCTCTACTTGAGTTGAAAACAGGAAAA
TCCCGAGAGTTTCAATTTCCCCGCTGCCAGAAATGACCGTCAGACGTTGG
TCTTGCGGGTATCGTACCGGTACTACTGTTCTCTCCCTCGCTTGACGATA
ACACAGGCGCCAGAAATATTAGTACGCTATTTTTCCAAGTGGTGATGGTG
TGGTGTTTCTTGATCAAATCGCCTCCAAATAAATAATGTGTGGTGATTTT
CTTTGGACGGGAAAACGATATTACATGGGAGATAAAGGGAACCCAGATCC
ATTCGTCTGTACACAGCTCGCAGGAATTATGCCACCAAGACCCGTCAATA
CGTTACCGGCACAGATCTATTATATGTGATTTGGAAGCAGCACACCTTGT
TAACTACCTCTGGTTCAACACAAACGGATGACTCGTTCCGCCGACTTGTC
TGCGGTTCGTTTTCCCCCTGTGTGTGTTCGGACATCAGCTGCAACAAACA
CCCAAATGAAACCTTCCTACAAGGAGTTGCTGGTGGCAGGTTCGTTGTTC
TGCAGGGCTTCAGTAGCCCGAAACCTGCAGGACGTTTCTGATGTCGGTCA
CTACGTGTGGTCTCTCGGATGCTGGACTGACGACAAGGAAAACCGTGTGC
TGTCGGAAGCTTCACTTATGGGCAACCTGGAGATGACTACGGAGGTAATA
CCCCGGAACGTAAACCCAAACAAGGTCGACGTGATTCTAGGAGTCGAAAC
GCCGCCAGGAGACCACTTTGAATGTTCAATGGTAATTTGACCATATTATC
TTCATGTATGCCTACGGGCGTCAGGCCCTACTTGTACCTAATTTCGCGTA
ACTTGGCTTCGAAATGGTAGTAAAATCCACTTCTAGTCACCGTAGCTCTA
TTGGGAGGAAAACAGGGGTTTCGGCGTTTCTGTCAGTGCACGGTTTGGTA
CTGGACAGACATTCCCCAGACCATAGCGCGACAAATATATCGTCAAGAAA
AAAACCTCGTACGAAGTGTGTACCCGGATAAGGGCCTGGCAACACGCCAA
ACACGGTGTGAGTCGGACGAGTTCCCGATGAAATGCGTGTATCTTTGAGT
GGCGAACTGTTGATGTTTTTGCGAGCCCGTTTTTTATTTGCTTTTTCCTC
GCCCATTTTCTTTTGTTTTCGACTTCCCTCCTCGCGGCTTGTAGCTACAC
ATTTGAGGCTGTGCAGTGTGTGTATGATGACAAACGTGCGCAACAAAGCA
AAAAATCTGAAAAAAACGCTCCTTCCCAGCCGGGATGCCCAACTCCCCAT
TGCAGAATCCGGCAGGGGTAGCATTTCAAGGATGACTGCTGGTGACTGAT
ATCGCCCTTGTGAAACACAGCTTGGTCATCGATATACCTGGGCATGCTCC
CTCCCACCGTCGCAGTGATTTGAGGTCAATGATGGAGAGACTATAACATG
CATTTCATTAATACCTCTACCCTTCCCTGTACACGCGCTGTTCGCCGTAG
TAGTTAGCCACTTGTGTTGTCTTTTGCTGGTAATTGTGTACTCGTTCATT
TTATTATCGTCCACCAATGCAACCCTCTTACTCCGAGACGTTATTCAGTG
CTTTGTGGAAACGCCTGCCTTGGTAGGTAACGAACCAAAGAGGTTACCAC
CATCGAGGCTTGACATTATTTGTCGAAACGATTTTTAGACTATAGTGTCC
CTGTGGCGTCACCCTGATGATTTGGCGAGGAGTATGTAAACACGGTGACG
GGGAAGATAATAATTATCATTGCGCGACATTTACATAGGCCTGACGCATG
TCTCCCTGACAAGATTTTCACTGCAGAAATTTCTGAGGCGGTAAGAGAAA
TGACGAACAAAAATATGGAAGCAGACACACGCGCTCTGCCAATGCAACAG
GGTCAGACCTACAGTTTGCCAACACAATCTAGGATGAACGGGTTTGGGTG
CCAAGGTTAGAGTAAGTGTTTTAGCTCGTATTACGAACGACTTCTGTGAC
TGCCATGCTATTTCGCGGCATTGTAGCCGTGAAAAATCATATTCTGATGC
CTTGGCGTTGTCGTGGTGAATCACCAAGATGTTAGCATACACCGTTCATC
ACAGTGTCGCCGCGGGGGAATGGCACCATGGTGTCCCTATGGTGCCCGAA
TTGTGTGAAGTTGTTTGGACACAAACTTTACTGCGAAGGTTCCGGCACCA
CTCTCACAAAACAAAATGAAAGCTCGAGAAATCACCAAAATTAGCCGTGA
CTCCCCTTACGTGGGCCATCTGATTCTACGGTTGTTTTTTCTCTCTTCGG
TGTGTGGAAATGCAGAACTGCGCGACTGAATGCATCGGATCGGTCTACTT
TGGAACTGAGTACGGTGGTGAGGTGAGCAGTTTGAGTTATTCAACGATGG
AGGGTGTGAAAATGGACCTAATGTTGTGCTCGTTCCACGATACGCTCTGG
CACATTCCTCTTTTAGAATTTCTCCTGTATACCGTTAGGTTGTATCAGCC
TCAACGATCTCGTTGAACACTTGCCAAAGTGTTCTCCTACAACATTGGAT
AGGGAACTAACTGTATGGTAATATCCCCGGGAAGAACATGTGCTAGTAAG
ATTCCTCTCACGTCGGGGATTTTGTTTCCCGAGCCTAGCACCCTAGCCTC
CCCGATCAATACACGACTCTTTTCAATAACAGAGAGGGCCGAAAGGGAAG
CCAGTAACGAAGGTTGCCATCTAAATTTTTTTTCCTGTTCCCAACGAAGA
TATATATTTCGCTCGAAATTGCAAACGTCATACCGTCAAACCACTTCATT
TGTTGAAGCAGACAATTCAATTCTAGCCCTTTACTCTTTGAGGGGACGAT
GGTCGTCATTTCCGAGTATTTTTTTAGGCTATACTCAAGGAACTCCTGAA
AAACGATTTTTAATGCGAACGCAGCGAGTCCATGGTTCAAGGACAAGCAC
GAACTATATTGGCGTGGCCGTGGGTGTATTATATATATCAATTGTTGATT
CCATGAAGCCATCGATAAGTACAACAAAGGTCAAGAACATGAAGTATTTT
TATCCGACAAGTTGTCTGGGTCCGTTTCAACGGCAAACGGTAGATCATGC
CTGCATTTTCAATCCGATATTTGGGGAAGTTCCAATCTCTCGTCGCCTCG
CTCCCTCACAACGTCCTATTTCTCTGGACACCCCCTGTCTACCTCGTGGG
GATTTGCGTGACTCTTAGTGCTTCTGTGGAGCTTCCACGGACAATCCCGC
CGAGTTTGGTGGGTCCACTGCTTGTACCATGCCGTGCACCGGGGACAGCA
GTCAGATTTGCGGGGGCAGGAACGCCATCAACGTCTTCAAATTTACGGAC
TACATTGGCGAGGGGTGCTTTGTTGACGATACTGAAACGCCCGTGTTGAG
TGCGGCGGCCTACGAGGAAGTCGGCATGACCACAGATGTGAGAAGAACAT
GATAGATGTTGGATACAACGGTCGAATAGTTGGTTGATTGCGGCACCCCA
GCTGAGCATGGAAACGCAATTTTAATGGGCGGTGGCACGAAGTCGTCGGT
CGCCCACCCCGAAGGACACTTCACCGGTGGGCACAGACTATTGAGCAGTT
CGCTCGCTACTCAAGCAAGTCTTACCGCTTGCTGTGCCGTGGAACTACGT
CTTATTTCATTGGCCTCCTCTCCCTCTGCTTTTCTATAACAGAGGTGCGC
CGAGCTTTGCGATGAGTACCCTGTCTTCGGGACTGAATCTGGGACGAAGG
TCAGTATTTTATTAGGTTTGGGACATCTAGTGTCATTGGGCGCGCGCGTC
GCTACAAGGATAGAAGAATGAAAACACTGTTTTAGACGGGTCGTGGCGCC
ACTTGCGGTTGTTCAGCTGTGCTCATATCGTGTGTCCCATTCCATATAAT
CCTGTAACATGTTTAATCTCGGACGATGTGCAGACTCAGCTACGGCTATT
CGGGGGCATCATGTGGCAAAATCAAAGTGGCAAACAGACTAGATTATTTT
GTAAAAGCGACTGAAGTAACCGTATTTATATCCCGTTTTCTGCTCCAAAA
CAAGCATTCCGACGTACTAGGATTCCAATATGTTCATGCAAAATGCATTT
TTCAGCAGAAAACATACATTAATGCAATGAGTGGATTTGATGGTAGCCAT
AGTACGCGTTTCAACACGAGATATTGCCTGGCTAAACGCGTGCCTGCGCT
TGAGGTCACTTCGGTAACGATGAATGCTCCCAAAAATGAGATATTCAATA
ATTTTCTCTTTTCACCTCCTGCGTACTGTTTTGTGCTTCGCAGTGCTTCT
GCGGTTTGTCCACGGATGTACCAGATGAACTAGGTGACTCCTCTGGCTGC
ACGATTGCGTGTCCTGGCGCACCTGCGGAGACGTGCGGTGGACTGAATGC
AATTAGCGTATTCAGTTTTTACGCCGACAGCTGAACCAGCAAGGCGGTGA
ACTGTAGAGGATAGAGAGGATAAGTGGGATCGTTGGGAATACGATGAAGG
GAGTACCCGCAACAGGGACTCCAGCAGCAACCGCGTCCCGTCCATAACTG
GGGGTGTAGATTTAACATATCCTGCCTATGCATGTTCAATGAAACGAGGA
GACCTGACGTAGAGTTACATATATTTTTGACAGCTAGAGCTAGTAGGGTT
AATCGTTGCAAAAAAAATGCCTGATAAAGTAACAATACTTTTGTCAAATA
GGGTATATCGGAGCTGCGTCTTCTACTGTTCTTGAAAACGAGACTCAGTT
TGACTGATGTACAGTAGGCATGTGTGAAATCTTATGTTGTTGGCAGCTGC
CAAGTAAATAATTAGGGGGGCGCCCATGCCTTCTCCCGCAGTTTATGTAC
GGGGGTGCATGAAGGTCTTTGCACTGTGGCAGATACGCACTGTTCCATGC
GCAATATTCATGTACCCTCGTTTGGCAAGAGCCCCGTCTTTCTCGGTGTT
ATTGCTGTTTCTTTGGCAAACCTGTGGTATGCATGTTTGCCGGTACCGAA
ATAATCAGCACTTTGCACGATTCACGGGGGATTGGGTCCCATGGGGGTAG
GTGCATGTACTGGTCGTCATACCCTACAAATAACAAAATAGTTGGTGCTT
GGGGTTGACGTGTCGTAGACATGTCCTGGATCTTCGTCGCGAACTCGCGG
TAGTGTGGATGATGGCTTCACGAACGCCGATACCTCAGAGGTTGGCTGCC
AAGAACAACGACGGCAACACCAACAGCTGCAACAACCAAGGGCAACAGAC
CTACCGGAGGAGTTCGAAAACGTTGGCAGAGTGACTGGGCCAGCAACGAA
GATCTTGAAAGGGTTGTTGCGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig3027:11603..18625-

>mRNA_H-paniculata_contig3027.8209.1 ID=mRNA_H-paniculata_contig3027.8209.1|Name=mRNA_H-paniculata_contig3027.8209.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1776bp|location=Sequence derived from alignment at H-paniculata_contig3027:11603..18625- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTTGTGGGATGTGAGGATCAAGTCAATACCCCGATTCCTAATATGTG
GCAAGGACCTGTCCGACTGGTACATCTCGAAAGTTTCACCCGCCCCTCAC
ATCCTCACACGAGCACACACCCACACTTCACACCGCACAGTCTTCCTCTC
ACCTGCTGGAGCAAACTGCAGCATCACTATTGTATCTTCGTGGCGGTTGG
CAGAACAGATGCTTGTGGGATGTGAGGATCAAGTCAATACCCCGATTCCT
AATATGTGGCAAGGACCTGTCCGACTGGTACATCTCGAAAGTTTCACCCG
CCCCTCACATCCTCACACGAGCACACACCCACACTTCACACCGCACAGTC
TTCCTCTCACCTGCTGGAGCAAACTGCAGCATCACTATTGTATCTTCGTG
GCGGTTGGCAGAACAGCTGCAACAAACACCCAAATGAAACCTTCCTACAA
GGAGTTGCTGGTGGCAGGTTCGTTGTTCTGCAGGGCTTCAGTAGCCCGAA
ACCTGCAGGACGTTTCTGATGTCGGTCACTACGTGTGGTCTCTCGGATGC
TGGACTGACGACAAGGAAAACCGTGTGCTGTCGGAAGCTTCACTTATGGG
CAACCTGGAGATGACTACGGAGCTGCAACAAACACCCAAATGAAACCTTC
CTACAAGGAGTTGCTGGTGGCAGGTTCGTTGTTCTGCAGGGCTTCAGTAG
CCCGAAACCTGCAGGACGTTTCTGATGTCGGTCACTACGTGTGGTCTCTC
GGATGCTGGACTGACGACAAGGAAAACCGTGTGCTGTCGGAAGCTTCACT
TATGGGCAACCTGGAGATGACTACGGAGAACTGCGCGACTGAATGCATCG
GATCGGTCTACTTTGGAACTGAGTACGGTGGTGAGAACTGCGCGACTGAA
TGCATCGGATCGGTCTACTTTGGAACTGAGTACGGTGGTGAGTGCTTCTG
TGGAGCTTCCACGGACAATCCCGCCGAGTTTGGTGGGTCCACTGCTTGTA
CCATGCCGTGCACCGGGGACAGCAGTCAGATTTGCGGGGGCAGGAACGCC
ATCAACGTCTTCAAATTTACGGACTACATTGGCGAGGGGTGCTTTGTTGA
CGATACTGAAACGCCCGTGTTGAGTGCGGCGGCCTACGAGGAAGTCGGCA
TGACCACAGATTGCTTCTGTGGAGCTTCCACGGACAATCCCGCCGAGTTT
GGTGGGTCCACTGCTTGTACCATGCCGTGCACCGGGGACAGCAGTCAGAT
TTGCGGGGGCAGGAACGCCATCAACGTCTTCAAATTTACGGACTACATTG
GCGAGGGGTGCTTTGTTGACGATACTGAAACGCCCGTGTTGAGTGCGGCG
GCCTACGAGGAAGTCGGCATGACCACAGATAGGTGCGCCGAGCTTTGCGA
TGAGTACCCTGTCTTCGGGACTGAATCTGGGACGAAGAGGTGCGCCGAGC
TTTGCGATGAGTACCCTGTCTTCGGGACTGAATCTGGGACGAAGTGCTTC
TGCGGTTTGTCCACGGATGTACCAGATGAACTAGGTGACTCCTCTGGCTG
CACGATTGCGTGTCCTGGCGCACCTGCGGAGACGTGCGGTGGACTGAATG
CAATTAGCGTATTCAGTTTTTACGCCGACAGCTGATGCTTCTGCGGTTTG
TCCACGGATGTACCAGATGAACTAGGTGACTCCTCTGGCTGCACGATTGC
GTGTCCTGGCGCACCTGCGGAGACGTGCGGTGGACTGAATGCAATTAGCG
TATTCAGTTTTTACGCCGACAGCTGA
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