mRNA_H-paniculata_contig30241.8200.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30241.8200.1 vs. uniprot
Match: A0A6H5K982_9PHAE (Radical SAM core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K982_9PHAE) HSP 1 Score: 214 bits (545), Expect = 3.400e-62 Identity = 147/294 (50.00%), Postives = 168/294 (57.14%), Query Frame = 1
Query: 1 QISNYAKPGFQSRHNRAYWENVPFWAFGNGAASYIDGHRFSRPRDLPVYTRWVDRLTKEGWGRATSEEATT---DGVEGGKIVASS---EEPLVAGAAEEKDRLLDDVMLGFRLSEGIDLDELAVKYGSSAAEKVETGAAEGLRCGWVELAIEPAAAAATAAEVVGAVHMKPRGSHAVSSNNNIIRTLRSSRGSGGRGEMESVEGLSSSGVGSGASRDGDEGVGEEIQRSGLPRGTTEV-GGGETGSEVEGGAGSRITGR-RKLRLSDPDGFLFSNSVISSVFCELDKLKASQQ 858
+ISNYA+PGFQSRHNRAYWENVPF AFGNGAAS++DGHRFSRPR LP Y +WV L +EGW +AT T + + GG + EE + A E+D LLDDVMLGFRL EG+DL +A KYG SAA +VE GA EGLR GWV + AAA + VGA K S N+ R GGR S G GS A GD G R+ RG + GGG E + S G LRLSDPDGFLFSNSVISSVFCELD K Q
Sbjct: 256 EISNYARPGFQSRHNRAYWENVPFLAFGNGAASFVDGHRFSRPRGLPEYGQWVGELEEEGWAKATGAPRRTACEEVLPGGGGMGDGGGVEESRPSREALERDALLDDVMLGFRLKEGLDLRVVASKYGHSAARRVEEGATEGLRLGWV---VRDAAATGSHGGDVGAGGEK--------SGRNVDRVDDDFVYDGGRRSSSSTLG-----AGSAAGNVGDHG------RTSPGRGLPDYRGGGHEDRTAEVASNSGPRGEWGTLRLSDPDGFLFSNSVISSVFCELDGWKKCDQ 527
BLAST of mRNA_H-paniculata_contig30241.8200.1 vs. uniprot
Match: D7FRC0_ECTSI (Radical S-adenosyl methionine domain-containing protein 1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC0_ECTSI) HSP 1 Score: 206 bits (523), Expect = 1.710e-58 Identity = 140/293 (47.78%), Postives = 163/293 (55.63%), Query Frame = 1
Query: 1 QISNYAKPGFQSRHNRAYWENVPFWAFGNGAASYIDGHRFSRPRDLPVYTRWVDRLTKEGWGRATSE------EATTDGVEGGKIVASSEEPLVAGAAEEKDRLLDDVMLGFRLSEGIDLDELAVKYGSSAAEKVETGAAEGLRCGWVELAIEPAAAAATAAEVVGAVHMKPRGSHAVSSNNNIIRTLRSSRGSGGRGEMESVEGLSSSGVGSGASRDGDEGVGEEIQRSGLPRGTTEVGGGETGSEVEGGAGSRITGR-RKLRLSDPDGFLFSNSVISSVFCELDKLKASQQ 858
+ISNYA+PGFQSRHNRAYWENVPF AFGNGAAS++DG+RFSRPR LP Y +WV L +EGW +AT E G G A +EE + A E+D LLDDVMLGFRL EG+DL +A KYG SAA +VE GA EG+R GWV + AA + GA K N+ R GGRG ++ G GS A GD G G P + GG+ E + G LRLSDPDGFLFSNSVISSVFCELD K Q
Sbjct: 315 EISNYARPGFQSRHNRAYWENVPFLAFGNGAASFVDGYRFSRPRGLPEYGQWVGELEEEGWDKATGAPRRAACEEVLPGGGGMGDGAGAEESRPSREALERDALLDDVMLGFRLKEGLDLRVVASKYGHSAARRVEEGATEGMRQGWV---VRDTAARGSRGGDAGAGGEK--------GGRNVGRVDDDFVYDGGRGSSSTL------GAGSAAGDVGDHG--RTSPGRGFP---DDRSGGQEDRRAEVASDGGPRGEWGTLRLSDPDGFLFSNSVISSVFCELDGWKRCDQ 585
BLAST of mRNA_H-paniculata_contig30241.8200.1 vs. uniprot
Match: K9S4J9_9CYAN (Heme chaperone HemW n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9S4J9_9CYAN) HSP 1 Score: 113 bits (282), Expect = 3.910e-25 Identity = 59/142 (41.55%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 1 QISNYAKPGFQSRHNRAYWENVPFWAFGNGAASYIDGHRFSRPRDLPVYTRWVDRLTKEGWGRATSEEATTDGVEGGKIVASSEEPLVAGAAEEKDRLLDDVMLGFRLSEGIDLDELAVKYGSSAAEKVETGAAEGLRCGWV 426
++SNYA+PG+Q RHNR YWEN PF+ FG GAAS +DG RF+RPR Y W+DR + G +A E P A E DRLLD +MLG RL+EG+D +A ++G + + A + GWV
Sbjct: 246 EVSNYARPGYQCRHNRVYWENQPFYGFGMGAASCLDGQRFTRPRTRSEYFAWIDRYEADPQG----------------AIADPENP----APSETDRLLDTLMLGLRLAEGVDAGAIAQRFGPAVLTSIHQTLAPYEQEGWV 367
BLAST of mRNA_H-paniculata_contig30241.8200.1 vs. uniprot
Match: A0A6P0IJ49_9CYAN (Coproporphyrinogen III oxidase (Fragment) n=1 Tax=Moorena sp. SIO3I7 TaxID=2607832 RepID=A0A6P0IJ49_9CYAN) HSP 1 Score: 108 bits (270), Expect = 1.800e-24 Identity = 59/144 (40.97%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 1 QISNYAKPGFQSRHNRAYWENVPFWAFGNGAASYIDGHRFSRPRDLPVYTRWVDRLTKEGWGRATSEEATTDGVEGGKIVASSEEPLVAGAAEEKDRLLDDVMLGFRLSEGIDLDELAVKYGSSAAEKVETGAAEGLRCGWVEL 432
+ISNYA PG Q RHNR YWEN P++ FG GAASY G+RF+RPR Y WV++L + G GV G S +D LL+ +MLG RL+EG+ L LA ++G E++ T + C WVE+
Sbjct: 96 EISNYALPGHQCRHNRVYWENRPYYGFGMGAASYTQGYRFTRPRTRREYYAWVEQLVQAG------------GVSDGSPTTS------------EDVLLETLMLGLRLAEGLSLSMLAQRFGEKILEQIWTALLQYYGCNWVEV 215
BLAST of mRNA_H-paniculata_contig30241.8200.1 vs. uniprot
Match: A0A1D8TZT9_9CYAN (Heme chaperone HemW n=26 Tax=Moorena TaxID=1155738 RepID=A0A1D8TZT9_9CYAN) HSP 1 Score: 110 bits (274), Expect = 5.950e-24 Identity = 60/144 (41.67%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 1 QISNYAKPGFQSRHNRAYWENVPFWAFGNGAASYIDGHRFSRPRDLPVYTRWVDRLTKEGWGRATSEEATTDGVEGGKIVASSEEPLVAGAAEEKDRLLDDVMLGFRLSEGIDLDELAVKYGSSAAEKVETGAAEGLRCGWVEL 432
+ISNYA PG Q RHNR YWEN P++ FG GAASY G+RF+RPR Y WV++L + G GV G S +D LL+ +MLG RL+EG+ L LA ++G EK+ T + C WVE+
Sbjct: 252 EISNYALPGHQCRHNRVYWENRPYYGFGMGAASYTQGYRFTRPRTRREYYAWVEQLVQAG------------GVSDGSPTTS------------EDVLLETLMLGLRLAEGLSLSMLAERFGEKILEKIWTALLQYYGCNWVEV 371
BLAST of mRNA_H-paniculata_contig30241.8200.1 vs. uniprot
Match: A0A836CMJ4_9STRA (Radical S-adenosyl methionine domain-containing protein 1, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMJ4_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.130e-23 Identity = 62/141 (43.97%), Postives = 82/141 (58.16%), Query Frame = 1
Query: 1 QISNYAKPGFQSRHNRAYWENVPFWAFGNGAASYIDGHRFSRPRDLPVYTRWVDRL-TKEGWGRATSEEATTDGVEGGKIVASSEEPLVAGAAEEKDRLLDDVMLGFRLSEGIDLDELAVKYGSSAAEKVETGAAEGLRCG 420
+ISNYA+PG QS HNRAYWEN + AFGNGAAS++ RFSRPR L Y WV++L + W AT E P+ + +A ++ +MLG RLSEG+DLD+L + G+ E+V GA EG+ G
Sbjct: 261 EISNYARPGHQSAHNRAYWENRHYLAFGNGAASHVARARFSRPRRLQEYEAWVEQLESSNDWASATGGE-----------------PMDSESAA-----IEGLMLGLRLSEGVDLDKLREEVGAEWVERVLRGAREGVEGG 379
BLAST of mRNA_H-paniculata_contig30241.8200.1 vs. uniprot
Match: A0A8J7FVV3_9CYAN (Heme chaperone HemW n=4 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A8J7FVV3_9CYAN) HSP 1 Score: 108 bits (270), Expect = 2.530e-23 Identity = 56/144 (38.89%), Postives = 76/144 (52.78%), Query Frame = 1
Query: 1 QISNYAKPGFQSRHNRAYWENVPFWAFGNGAASYIDGHRFSRPRDLPVYTRWVDRLTKEGWGRATSEEATTDGVEGGKIVASSEEPLVAGAAEEKDRLLDDVMLGFRLSEGIDLDELAVKYGSSAAEKVETGAAEGLRCGWVEL 432
++SNYAKPGFQ RHNR YWEN P++ FG GAASY G RF+RPR Y +WV +G + A ++ LLD +MLG RL+EG+ L LA+++G E++ ++ GWVEL
Sbjct: 262 EVSNYAKPGFQCRHNRVYWENRPYYGFGMGAASYTQGQRFTRPRKRREYYQWVQGYKTQG-------------------------RIDAPVTPPQEALLDTLMLGLRLAEGLSLKTLALQFGEQVVEQILMTVVPYIQSGWVEL 380
BLAST of mRNA_H-paniculata_contig30241.8200.1 vs. uniprot
Match: A0A352AP89_9CYAN (Heme chaperone HemW n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352AP89_9CYAN) HSP 1 Score: 107 bits (266), Expect = 9.140e-23 Identity = 60/144 (41.67%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 1 QISNYAKPGFQSRHNRAYWENVPFWAFGNGAASYIDGHRFSRPRDLPVYTRWVDRLTKEGWGRATSEEATTDGVEGGKIVASSEEPLVAGAAEEKDRLLDDVMLGFRLSEGIDLDELAVKYGSSAAEKVETGAAEGLRCGWVEL 432
+ISNYA PG Q RHNR YWEN P++ FG GAASY+ G+RF+RPR Y WV +L +E G I+ S E EE D LL+ +MLG RL+EG+ L L ++G EK+ + GWVE+
Sbjct: 270 EISNYALPGHQCRHNRVYWENRPYYGFGMGAASYVGGYRFTRPRTRREYYAWVQQL-----------------IEAGGILDSPE-------LEETDVLLETLMLGLRLAEGLSLYTLKEQFGEKTLEKIRKRVQPYYQQGWVEV 389
BLAST of mRNA_H-paniculata_contig30241.8200.1 vs. uniprot
Match: UPI001686CAAD (radical SAM family heme chaperone HemW n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001686CAAD) HSP 1 Score: 106 bits (265), Expect = 1.290e-22 Identity = 58/144 (40.28%), Postives = 79/144 (54.86%), Query Frame = 1
Query: 1 QISNYAKPGFQSRHNRAYWENVPFWAFGNGAASYIDGHRFSRPRDLPVYTRWVDRLTKEGWGRATSEEATTDGVEGGKIVASSEEPLVAGAAEEKDRLLDDVMLGFRLSEGIDLDELAVKYGSSAAEKVETGAAEGLRCGWVEL 432
+ISNYAKPG+Q RHNR YW+N P++ FG GA SY+ G RF+RPR Y W+ + G + E+A T+ + D LL+ +MLG RL+EG+ L LA K+G+ EK+ T R GWVE+
Sbjct: 267 EISNYAKPGYQCRHNRVYWQNRPYFGFGMGATSYVQGRRFTRPRKTWEYYEWLHSEGAKQNGASEIEDAGTECFQ--------------------DILLETLMLGLRLAEGLSLSGLAEKFGTGTLEKILTCLQPYHRQGWVEI 390
BLAST of mRNA_H-paniculata_contig30241.8200.1 vs. uniprot
Match: A0A098TM98_9CYAN (Heme chaperone HemW n=2 Tax=Neosynechococcus TaxID=1501143 RepID=A0A098TM98_9CYAN) HSP 1 Score: 105 bits (263), Expect = 2.000e-22 Identity = 58/144 (40.28%), Postives = 76/144 (52.78%), Query Frame = 1
Query: 1 QISNYAKPGFQSRHNRAYWENVPFWAFGNGAASYIDGHRFSRPRDLPVYTRWVDRLTKEGWGRATSEEATTDGVEGGKIVASSEEPLVAGAAEEKDRLLDDVMLGFRLSEGIDLDELAVKYGSSAAEKVETGAAEGLRCGWVEL 432
+ISNYA+PG+ RHNR YWEN PF+ FG GAASY+ G RF+RPR Y +WV+ G AT E + L DRLL+ +MLGFRL+EG+ L L ++G + +V GWVE+
Sbjct: 248 EISNYARPGYHCRHNRVYWENRPFYGFGMGAASYLSGQRFTRPRTTKTYCQWVEA------GAATPEIRS----------------LTLTVDNGPDRLLETLMLGFRLAEGLSLSALDTQFGDATLRQVWQCLQPFYHQGWVEV 369 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30241.8200.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30241.8200.1 >prot_H-paniculata_contig30241.8200.1 ID=prot_H-paniculata_contig30241.8200.1|Name=mRNA_H-paniculata_contig30241.8200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=287bp QISNYAKPGFQSRHNRAYWENVPFWAFGNGAASYIDGHRFSRPRDLPVYTback to top mRNA from alignment at H-paniculata_contig30241:1082..2776- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30241.8200.1 ID=mRNA_H-paniculata_contig30241.8200.1|Name=mRNA_H-paniculata_contig30241.8200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1695bp|location=Sequence derived from alignment at H-paniculata_contig30241:1082..2776- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30241:1082..2776- >mRNA_H-paniculata_contig30241.8200.1 ID=mRNA_H-paniculata_contig30241.8200.1|Name=mRNA_H-paniculata_contig30241.8200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1722bp|location=Sequence derived from alignment at H-paniculata_contig30241:1082..2776- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |