prot_H-paniculata_contig3024.8199.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3024.8199.1
Unique Nameprot_H-paniculata_contig3024.8199.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length414
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3024.8199.1 vs. uniprot
Match: A0A6H5KDE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDE7_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 2.970e-47
Identity = 90/172 (52.33%), Postives = 120/172 (69.77%), Query Frame = 0 
Query:  218 NALDEIDHPDLTGALAALHGYVTNGGDSVMLEKAYDLARSVAGSKHDVRVAFDACRIALAAGYVHSLQNSTAELAHEFVLYHSLPRLAKSLEPYWNRRGHWISLAEELEWEQSMQSLLEVTSSVSLMTRVTDIIAVMDAEVGSGVAEAIGRFCVANPDMVSEYPNVAKLCVK 389
            N L+E DHP L GA+AALHGY  + GD+V LEKAY+LAR+VAGSKH + V+FDACR+ LA GYVH L     +LA +F   HSLP+LA+SL+PYW+R     +  EE EWE+ + SLLEVTSS++LMT   DI  V+D +    VAEA+G + V  P+ + +Y +V   C++
Sbjct:  169 NPLEEFDHPALQGAIAALHGYAASDGDTVFLEKAYELARAVAGSKHTLGVSFDACRVVLAVGYVHILIKGAPDLADKFAHQHSLPKLAQSLKPYWSRSPS-PTPDEEAEWEECVSSLLEVTSSIALMTDERDIWTVLDRDPFGEVAEAMGLYLVRRPNALQQYQDVGSACLR 339
[Close]
BLAST of mRNA_H-paniculata_contig3024.8199.1 vs. uniprot
Match: D7G8S7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S7_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 2.050e-46
Identity = 87/172 (50.58%), Postives = 118/172 (68.60%), Query Frame = 0 
Query:  218 NALDEIDHPDLTGALAALHGYVTNGGDSVMLEKAYDLARSVAGSKHDVRVAFDACRIALAAGYVHSLQNSTAELAHEFVLYHSLPRLAKSLEPYWNRRGHWISLAEELEWEQSMQSLLEVTSSVSLMTRVTDIIAVMDAEVGSGVAEAIGRFCVANPDMVSEYPNVAKLCVK 389
            N L+E DHP L GA+AALHGY  + GD+  LEKAY+LAR+VAGSKH + V+FDACR+ LA GYVH L     ++A+ F   HSLP+LA+SL+PYW+R     +  EE EWE+ + SLLEVTSS++LMT   DI  V+D +    VAEA+G +    P+++  Y +V   C++
Sbjct:   76 NPLEEFDHPALQGAVAALHGYAASDGDTSFLEKAYELARTVAGSKHTLGVSFDACRVVLAVGYVHILIKGAPDMANNFAHQHSLPKLAQSLKPYWSRSPS-PTPDEEAEWEECVSSLLEVTSSIALMTDEGDIWTVLDRDPFGEVAEAMGLYLARRPNVLQHYQDVGSACLR 246
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3024.8199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KDE7_9PHAE2.970e-4752.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8S7_ECTSI2.050e-4650.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3024contigH-paniculata_contig3024:7965..12278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3024.8199.1mRNA_H-paniculata_contig3024.8199.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3024 6608..12504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3024.8199.1 ID=prot_H-paniculata_contig3024.8199.1|Name=mRNA_H-paniculata_contig3024.8199.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=414bp
MSNMGVRNHITAHLVLDLMSTCCTKTSTARAASRNTHNGNHSKIGNNNMS
QRVQNLRHAIMMSQREESPSCSTSVSDCSSSSIDCADDTVTSISNSNSSD
NNSSFASSSAHTEKAPSSWREFPEPDGRSSECSDELFEGEEEDEEVDRSR
AGAAAELRSLSCNTNMGLRYPQRQQQQQQQQQQLATTNDPSQDRHRQRRD
LDSDCSHGTKDRSSRTLNALDEIDHPDLTGALAALHGYVTNGGDSVMLEK
AYDLARSVAGSKHDVRVAFDACRIALAAGYVHSLQNSTAELAHEFVLYHS
LPRLAKSLEPYWNRRGHWISLAEELEWEQSMQSLLEVTSSVSLMTRVTDI
IAVMDAEVGSGVAEAIGRFCVANPDMVSEYPNVAKLCVKRHLSAQQKASA
RRQQRQTNIYYSE*
back to top