mRNA_H-paniculata_contig3023.8197.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3023.8197.1 vs. uniprot
Match: A0A0A0RTZ6_SACJA (Phosphomannomutase n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A0A0RTZ6_SACJA) HSP 1 Score: 454 bits (1167), Expect = 3.380e-155 Identity = 219/248 (88.31%), Postives = 234/248 (94.35%), Query Frame = 1
Query: 1 KNPRIIALFDVDGTLTAARKEVKPEMVEFMAKLRERITVGVVGGSDLPKQKEQLGESVMQDYDYSFSQNGLVAYKAGELIGTKTISTHLGEDVLKRIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQGERDAFEVYDKEHKIRETMVSAMRAEFGDLDLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTSQYDEIHFFGDKTFKGGNDHEIFESERTVGHTVTSPEDTMAQCKELFFKD 744
KNPRIIALFDVDGTLTAARKEV P+MVEF+ LRERIT+GVVGGSDLPKQKEQLGESVM+DYDYSFSQNGLVAYKAGELIG +TIS H+GE+ LK+IINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQ ERDAFE YD HKIRETMV+AMR EF DL+LTFSIGGQISFDLFPTGWDKTFCLQFLGEGT++YDEIHFFGDKTFKGGND+EIFESERT+GHTVTSP DT+ QCKELFFKD
Sbjct: 5 KNPRIIALFDVDGTLTAARKEVLPDMVEFIKTLRERITIGVVGGSDLPKQKEQLGESVMEDYDYSFSQNGLVAYKAGELIGQQTISKHVGEENLKKIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQEERDAFEQYDNVHKIRETMVAAMREEFADLNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTAEYDEIHFFGDKTFKGGNDNEIFESERTIGHTVTSPADTIQQCKELFFKD 252
BLAST of mRNA_H-paniculata_contig3023.8197.1 vs. uniprot
Match: A0A7S1Y4G5_9STRA (Phosphomannomutase n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y4G5_9STRA) HSP 1 Score: 372 bits (955), Expect = 3.230e-123 Identity = 173/244 (70.90%), Postives = 209/244 (85.66%), Query Frame = 1
Query: 4 NPRIIALFDVDGTLTAARKEVKPEMVEFMAKLRERITVGVVGGSDLPKQKEQLGESVMQDYDYSFSQNGLVAYKAGELIGTKTISTHLGEDVLKRIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQGERDAFEVYDKEHKIRETMVSAMRAEFGDLDLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTSQYDEIHFFGDKTFKGGNDHEIFESERTVGHTVTSPEDTMAQCKELF 735
NPRIIALFDVDGTLT R EV P+M+EFM L E+ITVG+VGGSDLPKQ+EQLGE + + + Y+FSQNGLVAYK GEL+ +TIS HLGED +KRI+NW LKY+S +DIPVKRGTFIEFR+GM+NISP+GRNCS+ ER+ +E +D EH IR+ MV AM+ EF +L+LTFSIGGQISFD+FPTGWDKT+CL+FL EG +DE+HFFGDKTF+GGND+EIF S+RT+GHTVTSP+DT QC ELF
Sbjct: 5 NPRIIALFDVDGTLTVPRGEVTPDMMEFMKNLSEKITVGIVGGSDLPKQEEQLGEGIAKVFPYNFSQNGLVAYKNGELLEIQTISKHLGEDNIKRIVNWTLKYLSDVDIPVKRGTFIEFRSGMMNISPIGRNCSRPERNDYEKFDLEHNIRKNMVEAMKKEFAELNLTFSIGGQISFDVFPTGWDKTYCLKFLAEG--DFDEVHFFGDKTFEGGNDYEIFTSDRTIGHTVTSPDDTKKQCTELF 246
BLAST of mRNA_H-paniculata_contig3023.8197.1 vs. uniprot
Match: A0A7S3PZ64_9STRA (Phosphomannomutase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZ64_9STRA) HSP 1 Score: 359 bits (922), Expect = 6.350e-118 Identity = 167/244 (68.44%), Postives = 208/244 (85.25%), Query Frame = 1
Query: 4 NPRIIALFDVDGTLTAARKEVKPEMVEFMAKLRERITVGVVGGSDLPKQKEQLGESVMQDYDYSFSQNGLVAYKAGELIGTKTISTHLGEDVLKRIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQGERDAFEVYDKEHKIRETMVSAMRAEFGDLDLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTSQYDEIHFFGDKTFKGGNDHEIFESERTVGHTVTSPEDTMAQCKELF 735
NPRIIALFDVDGTLT R EV P+M+ FM L E+ITVG+VGGSDLPKQ+EQLG+ +++ + Y+FSQNGLVAYK GE++ +TIS LGE+ +K+++NWV+KY++ +DIP+KRGTFIEFR+GM NISP+GRNCS+ ER+ FE +D EH IR+ MV+AMR EF DL LT+SIGGQISFD+FP GWDKT+ L+FL EG +DEIHFFGDKTF+GGND+EIF SERT+GHTVTSPEDT AQC++LF
Sbjct: 22 NPRIIALFDVDGTLTIPRGEVTPDMMAFMKSLSEKITVGIVGGSDLPKQEEQLGDGIVKTFPYNFSQNGLVAYKDGEMLEIQTISKFLGEENIKKLVNWVMKYLADVDIPIKRGTFIEFRSGMFNISPIGRNCSRVERNDFEKFDLEHNIRKDMVAAMRKEFADLGLTYSIGGQISFDVFPVGWDKTYSLKFLPEG--DFDEIHFFGDKTFEGGNDYEIFTSERTIGHTVTSPEDTKAQCEKLF 263
BLAST of mRNA_H-paniculata_contig3023.8197.1 vs. uniprot
Match: C8CK09_WHEAT (Phosphomannomutase n=5 Tax=Triticinae TaxID=1648030 RepID=C8CK09_WHEAT) HSP 1 Score: 357 bits (917), Expect = 1.980e-117 Identity = 168/248 (67.74%), Postives = 205/248 (82.66%), Query Frame = 1
Query: 1 KNPRIIALFDVDGTLTAARKEVKPEMVEFMAKLRERITVGVVGGSDLPKQKEQLGESVMQDYDYSFSQNGLVAYKAGELIGTKTISTHLGEDVLKRIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQGERDAFEVYDKEHKIRETMVSAMRAEFGDLDLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTSQYDEIHFFGDKTFKGGNDHEIFESERTVGHTVTSPEDTMAQCKELFFKD 744
K ++ALFDVDGTLTA RKEV PEM+EFM +LRE +TVGVVGGSDL K EQLG+SV+ DYDY FS+NGLVA+K G+LIGT+++ T+LG+D LK IN+ L Y++ +DIP+KRGTFIEFR+GM+N+SP+GRNCSQ ERD FE YDK H +R MVS +R +F L+LTFSIGGQISFD+FP GWDKT+CL++L E + EIHFFGDKT+KGGNDHEIFESERTVGHTVTSP DT+ QCK +F +
Sbjct: 9 KTAGVLALFDVDGTLTAPRKEVTPEMLEFMKRLRENVTVGVVGGSDLVKISEQLGKSVITDYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEE----FKEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPNDTVQQCKSIFLSE 252
BLAST of mRNA_H-paniculata_contig3023.8197.1 vs. uniprot
Match: C8CK10_WHEAT (Phosphomannomutase n=13 Tax=Triticeae TaxID=147389 RepID=C8CK10_WHEAT) HSP 1 Score: 357 bits (916), Expect = 2.710e-117 Identity = 167/245 (68.16%), Postives = 206/245 (84.08%), Query Frame = 1
Query: 1 KNPRIIALFDVDGTLTAARKEVKPEMVEFMAKLRERITVGVVGGSDLPKQKEQLGESVMQDYDYSFSQNGLVAYKAGELIGTKTISTHLGEDVLKRIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQGERDAFEVYDKEHKIRETMVSAMRAEFGDLDLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTSQYDEIHFFGDKTFKGGNDHEIFESERTVGHTVTSPEDTMAQCKELF 735
KN ++ALFDVDGTLTA RKEV PEM+EFM +LRE +TVGVVGGSDL K EQLG+SV+ DYDY FS+NGLVA+K G+LIGT+++ T+LG+D LK IN+ L Y++ +DIP+KRGTFIEFR+GM+N+SP+GRNCSQ ERD FE YDK H +R MVS +R +F L+LTFSIGGQISFD+FP GWDKT+CL++L E + EIHFFGDKT+KGGNDHEIFES+RTVGHTVTSP+DT+ QC+ +F
Sbjct: 8 KNAGVLALFDVDGTLTAPRKEVTPEMLEFMKRLRENVTVGVVGGSDLVKISEQLGKSVITDYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVSMLREKFAHLNLTFSIGGQISFDVFPHGWDKTYCLRYLDE----FKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPDDTVQQCRSIF 248
BLAST of mRNA_H-paniculata_contig3023.8197.1 vs. uniprot
Match: PMM_WHEAT (Phosphomannomutase n=28 Tax=Pooideae TaxID=147368 RepID=PMM_WHEAT) HSP 1 Score: 357 bits (915), Expect = 3.570e-117 Identity = 167/248 (67.34%), Postives = 206/248 (83.06%), Query Frame = 1
Query: 1 KNPRIIALFDVDGTLTAARKEVKPEMVEFMAKLRERITVGVVGGSDLPKQKEQLGESVMQDYDYSFSQNGLVAYKAGELIGTKTISTHLGEDVLKRIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQGERDAFEVYDKEHKIRETMVSAMRAEFGDLDLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTSQYDEIHFFGDKTFKGGNDHEIFESERTVGHTVTSPEDTMAQCKELFFKD 744
K+ ++ALFDVDGTLTA RKEV PEM+EFM +LRE +TVGVVGGSDL K EQLG+SV+ DYDY FS+NGLVA+K G+LIGT+++ T+LG+D LK IN+ L Y++ +DIP+KRGTFIEFR+GM+N+SP+GRNCSQ ERD FE YDK H +R MVS +R +F L+LTFSIGGQISFD+FP GWDKT+CL++L E + EIHFFGDKT+KGGNDHEIFES+RTVGHTVTSP DT+ QCK +F +
Sbjct: 6 KDAGVLALFDVDGTLTAPRKEVTPEMLEFMKRLRENVTVGVVGGSDLVKISEQLGKSVITDYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEE----FKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIFLSE 249
BLAST of mRNA_H-paniculata_contig3023.8197.1 vs. uniprot
Match: A0A7S2XTA7_9STRA (Phosphomannomutase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTA7_9STRA) HSP 1 Score: 357 bits (915), Expect = 3.700e-117 Identity = 164/245 (66.94%), Postives = 205/245 (83.67%), Query Frame = 1
Query: 1 KNPRIIALFDVDGTLTAARKEVKPEMVEFMAKLRERITVGVVGGSDLPKQKEQLGESVMQDYDYSFSQNGLVAYKAGELIGTKTISTHLGEDVLKRIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQGERDAFEVYDKEHKIRETMVSAMRAEFGDLDLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTSQYDEIHFFGDKTFKGGNDHEIFESERTVGHTVTSPEDTMAQCKELF 735
KNPRIIALFDVDGTLT R EV+P+M+ FM L ++TVG+VGGSDLPKQ+EQLG+ + + Y+FSQNGLVAYK+GEL+ +TIS HLGED +KR++NWV+KY++ +D+P+KRGTFIEFR+GM NISP+GRNCS+ ER+ +E +D + IR+ MV+AM+ EF DL+LTFSIGGQISFD+FP GWDKT+CL FL G +DEIHFFGDKTF+GGND+EIF SERT+GHTVTSP DT QC +LF
Sbjct: 7 KNPRIIALFDVDGTLTLPRGEVEPQMMAFMKDLATKVTVGIVGGSDLPKQEEQLGDGIANVFPYNFSQNGLVAYKSGELLEIQTISKHLGEDNVKRLVNWVMKYLADVDLPIKRGTFIEFRSGMFNISPIGRNCSREERNDYETFDLANNIRKNMVAAMQTEFADLNLTFSIGGQISFDVFPKGWDKTYCLNFLDAG--DFDEIHFFGDKTFEGGNDYEIFSSERTIGHTVTSPADTKEQCTKLF 249
BLAST of mRNA_H-paniculata_contig3023.8197.1 vs. uniprot
Match: A0A835Z1B0_9STRA (Phosphomannomutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B0_9STRA) HSP 1 Score: 356 bits (914), Expect = 5.230e-117 Identity = 173/245 (70.61%), Postives = 198/245 (80.82%), Query Frame = 1
Query: 4 NPRIIALFDVDGTLTAARKEVKPEMVEFMAKLRERITVGVVGGSDLPKQKEQLGESVMQDYDYSFSQNGLVAYKAGELIGTKTISTHLGEDVLKRIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQGERDAFEVYDKEHKIRETMVSAMRAEFGDLDLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTSQYDEIHFFGDKTFKGGNDHEIFESERTVGHTVTSPEDTMAQCKELFF 738
NPRI+ALFDVDGTLT R + PEM F+A+LR ITVGVVGGSDL KQ EQLG VM YD++FS+NGLVAYK G IG +I+ HLGE+ LKRI+NWVL Y+S +DIP+KRGTFIEFRTGMLNISP+GRNCS ERD FE YD EHK+R TMV AM+ EFGDL LTFSIGGQISFDLFPTGWDKT+CL++L EG +DEIHFFGDKTFKGGND+EI+ R GH+V S DTM QC +LFF
Sbjct: 5 NPRILALFDVDGTLTEPRLAIVPEMRTFIARLRREITVGVVGGSDLKKQMEQLGRDVMDCYDWNFSENGLVAYKDGVPIGRTSITDHLGEENLKRIVNWVLGYLSKVDIPIKRGTFIEFRTGMLNISPIGRNCSHAERDEFEKYDLEHKVRATMVKAMQDEFGDLGLTFSIGGQISFDLFPTGWDKTYCLRYLPEG--DFDEIHFFGDKTFKGGNDYEIYTHPRIKGHSVKSFSDTMEQCTQLFF 247
BLAST of mRNA_H-paniculata_contig3023.8197.1 vs. uniprot
Match: B8BZK1_THAPS (Phosphomannomutase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZK1_THAPS) HSP 1 Score: 355 bits (911), Expect = 1.430e-116 Identity = 168/244 (68.85%), Postives = 205/244 (84.02%), Query Frame = 1
Query: 4 NPRIIALFDVDGTLTAARKEVKPEMVEFMAKLRERITVGVVGGSDLPKQKEQLGESVMQDYDYSFSQNGLVAYKAGELIGTKTISTHLGEDVLKRIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQGERDAFEVYDKEHKIRETMVSAMRAEFGDLDLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTSQYDEIHFFGDKTFKGGNDHEIFESERTVGHTVTSPEDTMAQCKELF 735
NPRIIALFDVDGTLT R EV EM+ FM +L E+ITVG+VGGSDLPKQ+EQLGE + + + Y+FSQNGLVAYK GEL +TI+ LGED +K+I+NW LKY++ +DIPVKRGTFIEFR+GM+NISP+GRNCS+ ER+ +E D E IR+ MV AMR EF DL+LT+SIGGQISFD+FPTGWDKT+CL++L + +DEIHFFGDKTF+GGND+EIFESERT+GHTVTSPEDT QC++LF
Sbjct: 6 NPRIIALFDVDGTLTIPRGEVTEEMMAFMHRLSEKITVGIVGGSDLPKQEEQLGEGIAKVFPYNFSQNGLVAYKNGELQEVQTIAKFLGEDNIKKIVNWTLKYLADVDIPVKRGTFIEFRSGMMNISPIGRNCSREERNDYEKIDLERNIRKNMVEAMRKEFADLNLTYSIGGQISFDVFPTGWDKTYCLKYLD--AADFDEIHFFGDKTFEGGNDYEIFESERTIGHTVTSPEDTREQCEKLF 247
BLAST of mRNA_H-paniculata_contig3023.8197.1 vs. uniprot
Match: A0A6V1Q7K0_HETAK (Phosphomannomutase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q7K0_HETAK) HSP 1 Score: 357 bits (915), Expect = 1.440e-116 Identity = 167/245 (68.16%), Postives = 202/245 (82.45%), Query Frame = 1
Query: 1 KNPRIIALFDVDGTLTAARKEVKPEMVEFMAKLRERITVGVVGGSDLPKQKEQLGESVMQDYDYSFSQNGLVAYKAGELIGTKTISTHLGEDVLKRIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQGERDAFEVYDKEHKIRETMVSAMRAEFGDLDLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTSQYDEIHFFGDKTFKGGNDHEIFESERTVGHTVTSPEDTMAQCKELF 735
+NPRI+ALFDVDGT+TAARK + PEM F L +I+VGVVGGSDL KQKEQLG+ V+ +YDYSFS+NGL+A+K GE IG IS HLGED LKR+INWVL+Y + +D+P+KRGTFIEFRTGMLN+SP+GR+CS+ ER+AFE +D + +R MV MR EF DL L FSIGGQISFD+FP GWDKT+CL++L E + YDEIHFFGDKT KGGND+EIFE+ERT+GHTVTSP+DT AQC LF
Sbjct: 27 RNPRILALFDVDGTMTAARKTITPEMRNFFRALNTKISVGVVGGSDLAKQKEQLGDDVVTEYDYSFSENGLIAFKDGEEIGRTAISDHLGEDNLKRVINWVLRYFADLDVPIKRGTFIEFRTGMLNVSPIGRDCSREERNAFEEFDLANGVRAAMVERMREEFADLGLQFSIGGQISFDVFPQGWDKTYCLRYLPE--TDYDEIHFFGDKTMKGGNDYEIFEAERTIGHTVTSPDDTKAQCMALF 269 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3023.8197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3023.8197.1 >prot_H-paniculata_contig3023.8197.1 ID=prot_H-paniculata_contig3023.8197.1|Name=mRNA_H-paniculata_contig3023.8197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp MVEFMAKLRERITVGVVGGSDLPKQKEQLGESVMQDYDYSFSQNGLVAYKback to top mRNA from alignment at H-paniculata_contig3023:5345..11351+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3023.8197.1 ID=mRNA_H-paniculata_contig3023.8197.1|Name=mRNA_H-paniculata_contig3023.8197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6007bp|location=Sequence derived from alignment at H-paniculata_contig3023:5345..11351+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3023:5345..11351+ >mRNA_H-paniculata_contig3023.8197.1 ID=mRNA_H-paniculata_contig3023.8197.1|Name=mRNA_H-paniculata_contig3023.8197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1344bp|location=Sequence derived from alignment at H-paniculata_contig3023:5345..11351+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |