prot_H-paniculata_contig3021.8194.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3021.8194.1
Unique Nameprot_H-paniculata_contig3021.8194.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1999
Homology
BLAST of mRNA_H-paniculata_contig3021.8194.1 vs. uniprot
Match: D7FLC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC6_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.640e-42
Identity = 183/557 (32.85%), Postives = 250/557 (44.88%), Query Frame = 0
Query:  687 SSVGLSMKIQSIFEPGTRRLEAEGDRQSLEYDGKRGLRKLSYNYNEYVTAYNTAMVEVCANALGVDSAEVVHVETDFGVQDSAVKTIRRGV-APKITSNEVLAASQLTPVTTCKCRVGKGYESPSLAAAYAVDRLMQAKQFDLMIKDNSFGPVNAVLTDVAFWQDECTSSCPSGDGSYASIFPAETE--SQRDAANDHDETQSHLKWFVVLTAALVGLAIVSWTAAXXXXXXXXXXQQTIEERYAVNPVKPGGKGESHSPSGTALQTSKTALSGHLGGVSPPLSPTASQATTAAARGVRPPAPISVNLITGGAFGSGGKRTPREPDSPGEADWRRKFGLNPSRDSSYRSAPVSPRRSASSSSTSSEAKIRQIVGNPFFSTGSNVDSGREVNAASEGTASGGRGGERHGDRGRSPGSANGSMDLSP-WQ--DVLNAEKRRSSDCVVRSSIAKPMVGGMHRGVTLTPPRRELNRLKEVLNKRPTINHAQTTTPSPATTASIT--------------------KGAFRGERSPSSRAAAESGWGATPVYEIDLAGDDSTG 1217
            SS G++++IQSIFE   RR     +   + +DG    R LS  Y E   AY+  MV+VCA  +GVD   V+ V T FG   +A    RRG+     +S+E + A+QLTPVTTC+  +    ++ S+AAA  VDRLMQ + F L + +N FGPVN V+T              SG   +    PAE+E  S +   N  D                 GLA++S              Q+      A +P+  G      SP  + +         H G                  R   PP  +S +   GG         P EP SPGEADWR KFGL P RD +YRSAP+SPRRS  S  ++S     Q  G PF+++  +      V AA++G+  G  G     D       A+ +M+    W   D ++A  + ++D VVRSS+AK    G      +T PR+ELNRLKE LN+   +    +T  SP  TAS                        AF G  S +  A A S     P+YEIDL  D++ G
Sbjct:  711 SSRGITLEIQSIFEARRRRRALSSE---VSHDGSSERRALSVVYEEDAEAYDETMVDVCAYMVGVDRERVISVWTSFGPDGAAEDAARRGLMTSSSSSDEAIMATQLTPVTTCEVDLSGEGDTRSMAAATMVDRLMQPENFVLAMDENQFGPVNVVVT--------------SGPTKWRKSKPAESERYSVKSPPNTKD-------------GGGAGLAVLS-------------PQRYERSATATSPIPDGSSPSCLSPGRSPVPPQAXXXPKHSG------------------RKRTPPPRLSTSPGRGGDV-------PVEPPSPGEADWRHKFGLGPLRDYTYRSAPISPRRSPLSVGSAS-----QSAGEPFYTSYQD-----HVVAAADGSMGGKVGLTPLAD------DASAAMESQVHWHVSDEVDASVQHNNDPVVRSSLAK---AGTVIANAITSPRKELNRLKEALNRPSRLQACHST--SPTVTASSADPSSMPGFFGSEGGFSPGGNNNAFGGSSSGNLNARASS-----PIYEIDLEADENGG 1173          
BLAST of mRNA_H-paniculata_contig3021.8194.1 vs. uniprot
Match: A0A6H5JEE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEE7_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.990e-26
Identity = 147/434 (33.87%), Postives = 209/434 (48.16%), Query Frame = 0
Query:  811 LAAAYAVDRLMQAKQFDLMIKDNSFGPVNAVLTDVAFWQDECTS-SCPSGDGSYASIFP-AETESQRDAANDHDETQSH---LKWFVVLTAALVGLAIVSWTAAXXXXXXXXXXQQ---TIEERYAV----NPVKPGGKGESH-SPSGTALQTSKTALSGHLGGVSPP-LSPTASQATTA-------AARGVRPPAPISVNLITGGAFGSGGKRTPREPDSPGEADWRRKFGLNPSRDSSYRSAPVSPRRSASSSSTSSEAKIRQIVGNPFFSTGSNVDSGREVNAASEGTASGGRGGERHGDRGRSPGSANGSMDLSP-WQ--DVLNAEKRRSSDCVVRSSIAKPMVGGMHRGVTLTPPRRELNRLKEVLNKRPTINHAQTTTPSPATTASITKGAFR--GERSPSSRAAAESGWGA---TPVYEIDLAGDDS 1215
            +AAA  VDRLMQ + F L + +N FGPVN V+T      +EC   +CP+GDGSYAS++P AET S + +    D T  +   L WF V+  AL  LA++SW             ++      ERY+V    N    GG G +  SP G   Q S TA S    G SP  +SP  S            + R   PP  +S +          G+  P EP SPGEADWR KFGL P RD +YRSAP+SPRRS  S  ++S +      G PF+++  +      V AA++G   G  G     D       A+ +M+    W   D ++A  + ++D VVRSS+AK    G      +T PR+  +      +  PT+  A +  PS       ++G F   G  +    +++   + A   +P+YEIDL  D++
Sbjct:    1 MAAATMVDRLMQPENFVLAMDENQFGPVNVVVTS-----NECRDQTCPAGDGSYASVYPIAETPSSQSSVVGEDTTPDNELKLLWFAVIAGALFLLAVLSWCVVCLCCGGPTKWRKPKPAESERYSVKSPPNTKDGGGAGLAVLSPQGN--QRSATATSPIPDGSSPSCMSPGRSPVXXXXXXXXXHSGRKRTPPPRLSTSP-------GRGRDVPVEPPSPGEADWRHKFGLGPLRDHTYRSAPISPRRSPLSVGSASRS-----AGGPFYTSYQD-----HVVAAADGNMGGKVGLTPLAD------DASAAMESQVHWHVSDEVDASVQHNNDPVVRSSLAK---AGTVIANAITSPRKACH------STSPTVT-ASSADPSSMPGFFGSEGGFSPGGNNNTFGGSSSSHNFNARASSPIYEIDLEADEN 394          
BLAST of mRNA_H-paniculata_contig3021.8194.1 vs. uniprot
Match: A0A6H5JBT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT3_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 4.960e-19
Identity = 48/75 (64.00%), Postives = 56/75 (74.67%), Query Frame = 0
Query:   80 LEFVIDLCGYCDKYGGAAFNPIDSFHYRDAEGNEPNDLWKGYKLKLPCEGLEGEPVQSIIATPRP----TPAPVA 150
            LEF +DLCGYCD Y   +FNPID+F Y DAEGNEPND   GY+LKL C G+EG+PV+SI ATP P    TP+P A
Sbjct:    3 LEFRLDLCGYCDTYNNGSFNPIDTFQYEDAEGNEPNDRKSGYQLKLDCAGIEGDPVESINATPAPVRPPTPSPTA 77          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3021.8194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLC6_ECTSI1.640e-4232.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEE7_9PHAE1.990e-2633.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBT3_9PHAE4.960e-1964.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..650
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 651..672
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 910..1999
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 673..889
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 890..909

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3021contigH-paniculata_contig3021:4506..17471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3021.8194.1mRNA_H-paniculata_contig3021.8194.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3021 4504..17471 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3021.8194.1 ID=prot_H-paniculata_contig3021.8194.1|Name=mRNA_H-paniculata_contig3021.8194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1999bp
VKVNSAPTWSISGECPAVRVAVELTAWSDPCATDLRLYVGVEEPPRDVKT
VGGYDSSTVVSGNGVEWTAPMLSSESAIGLEFVIDLCGYCDKYGGAAFNP
IDSFHYRDAEGNEPNDLWKGYKLKLPCEGLEGEPVQSIIATPRPTPAPVA
TNAPVITEAPKSTEAPTATPAPTPYTTTVVKSNELPTETPAPMPSMDAAV
KSTEAPVSTDAPTVTPVPTSSSTTIVVSTEAPTPTLAPTSFTTTSVESTQ
AAVASDALVSTGAPAATLAPTPSIAAAVESTDAPVATDAPVSTEAPKSTE
MPTATLAPTPSTAAVFKSTEAPVVTDVSVSTEAPKSTEAPMTTLAPTLST
AAALESIESAFGTPAPEGSSALTPSPTVAPVDTQAPMDDQASTVTPSPTE
LVFTTTSVGGTAAPSYEAAPGGDTRSPVHTQSPSNVADLNLFTPSPTTRA
TSAPSQVSRTMPSLAVETAAPTMTPAAAVVAEDSPAPVAAVSSVEKTAAP
TLLGEDWTRGGLIFTDAPTITAYDTQAPTSSSSATPTQIPTLSPSITPTQ
APTSSPSTAATPTPTISPTIAPTQTPTPPPTITPTQTPTPSPTIAPTQTP
TPSPTSAPPGEEIMASHLLFYSKNVGLGLGWGRSLGERHDMLNSAKWATG
FLRTWTSLISTATIFLPCIIFCHRPWPRMYADESLSSSVGLSMKIQSIFE
PGTRRLEAEGDRQSLEYDGKRGLRKLSYNYNEYVTAYNTAMVEVCANALG
VDSAEVVHVETDFGVQDSAVKTIRRGVAPKITSNEVLAASQLTPVTTCKC
RVGKGYESPSLAAAYAVDRLMQAKQFDLMIKDNSFGPVNAVLTDVAFWQD
ECTSSCPSGDGSYASIFPAETESQRDAANDHDETQSHLKWFVVLTAALVG
LAIVSWTAACCCCRRPKRKQQTIEERYAVNPVKPGGKGESHSPSGTALQT
SKTALSGHLGGVSPPLSPTASQATTAAARGVRPPAPISVNLITGGAFGSG
GKRTPREPDSPGEADWRRKFGLNPSRDSSYRSAPVSPRRSASSSSTSSEA
KIRQIVGNPFFSTGSNVDSGREVNAASEGTASGGRGGERHGDRGRSPGSA
NGSMDLSPWQDVLNAEKRRSSDCVVRSSIAKPMVGGMHRGVTLTPPRREL
NRLKEVLNKRPTINHAQTTTPSPATTASITKGAFRGERSPSSRAAAESGW
GATPVYEIDLAGDDSTGPHAQRVAASSPLSRIHEERGSDMSLDSMYTAGA
VRSTIRSSSNASFTTENNDVVTLRGPGSIIISDTERVCSDDAAASRAESS
PPRTPPGGVGVRSTSGRNVFAKSPGSVSRWGLPRRNSAASEGSSNVSTVV
DGSERPSAGTAAASRVPLSPASHATRYGASSGAVLVRSGSQDSDASTVSN
TSSMARMPPLRQDAGAGHRSPVRLALGDGPISPGRGARVPAPSVAGGSPV
GRVRAAGDGSRASQSPTASADGSHGSRGSQGSHIEWGPVLSSFACLTADG
DSEEWNPDDDRRQRRVRIRSPSNASSLPDSLRENDLGDRPQVREREGSNA
SSLPWSLVDGQDERTRLSDEGKLRARLSDEGKLSESTEKSGSSYGSPQRP
PTRATRIMVPKATSTTSAKGSVLPSTPLSLERALAMSRLRTAPGELTPVA
ETNAEDGSGFFSDSESDVSSVLSSTLSGSGQGARKPSRDPATLLAAAVEK
ARQVAGIPPPTSRSMAHAGKLSQLDEDPVELPSTFGKGEATLEVDTEGSD
GGRPVIAATLAAEAMVAFEKRKNKKVVLSPLPGKVDKMSKFEKVEGEESD
VIMDAVMEDAFGSEPRTSLGGESLAAMSTHRLSEARTSWSSESSFAVDGE
DVLNGETKSQASSGPRVIPPPASRGTGEEFSLMGALSALLGGKRVSDPAP
TVIDGSGSPRVSLAARASPDVGVESDAVVNVEDSEEKLHDVDVSSVMLVS
PGVAGGDSKAGKMRPKAGSAEEAFETAAAILRKRKAEEAATAAAAVGEV
back to top