mRNA_H-paniculata_contig302.8191.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig302.8191.1 vs. uniprot
Match: D8LS97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS97_ECTSI) HSP 1 Score: 348 bits (892), Expect = 1.410e-101 Identity = 361/1005 (35.92%), Postives = 472/1005 (46.97%), Query Frame = 1
Query: 1 MSNCYSGSVNLKLLRHGKGQYNYPNKAFRFDGRWSDGCKNGEGKFMVEGGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVFSSPTTGETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASGFQYTGDFSLGHPSGFGSATYPGGSTFSGPFEAGLKNGVGGKYACGITGISFVGEWKDGRVVLPPSIWAVEVCNAAASKSGS-DNDNSAKPNTGGKGSKKGKGAAKRKSAMMGAKRQANXXXXXXXXXRETPVVVAFDSDGKVSDLWCRCVRNTQDIGDVKNHPQILE----DDGGNPRRKLWPPREVVSTESGRTLAVTLHQITPETSPMELGSPSTFFVRRPDVTDVSERLERFPTDRLVAHFPLDKRCWPEGC--DGRLRII-----------------------SRSPSDASGEDGIE---------DGALEAQWQTILGDLGSNRCLMLGAGRDLSLTASNVF--AIDRTSGNAAG---NEQVDIQEGQGGNGSGVKEPLNKGRID---------QASTELLQ---------------TDQSHPVTVCIDYRLDLDMDTLACDNKKSESNICSGREQH--SPEKNVRIVAFGEDLEVWVLLRSSTPP--PPEDIIPDVGTTETPSAEKKQAVDAPPLFKLP--------GASAKATPCS---------------------TWYLHSISARAGSRTITVLCVQSDSERNQQNRSFGTGYEGILGGGKREYKAGGEVVYDATAWHSIALAYDPKCGESVLCLDGDVFPLHANDDAIPAAERFSPCNASESFVNGENTVVIGG-AGGMWTTLAVKNLAVYSVALDNRHVVAVTRVFRRWRKEEDIAAAKXXXXEDFWLEEACQAKKEERRAGQTKHGERPEWIAGATRTTTITKKLVRGEAKLVGIILPKAALEGGEWALRVEDVS---------------VACTAEKLPEADI-------EEERAIFPPLPGETIMLEQ 2643
MS Y+G ++L+ LRHG+GQY YPN FR+ G+W+ G K+G G F V GGST XXXXXXXXXXXXXX XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX GFQ+TG FS G P G Y CG+TGI ++GEW +G+ PS W +E+ + G D+ A P ++KG G K GAK PV+ + DG V+ LWCRCVR+ QD+ P L+ D+ P ++ PREVVS ESGRTL VTLH++T P + P FFVRRPD TDVSE L RFP LVA F D+RC+P+G DG +I S++P+ A + G++ D +E WQ I ++ SNRCL++ A + SL +F + +T G N +D +E G GV R + S ELLQ Q P VC+D+RLDL M+T K ES G ++ EK +RIV G D+EV ++R PP PP +VG E + + L K GA A+P + TWYLH+IS R GS TV C + ++ S + E + G + + D WH++AL P+ S LC+DG+ L + AA C+ SE ++ + VV+GG AGG W +LAVKNLAVY+ + A+T+VFR WR+ ++ A ++ W EE +A++EER G GERPEW+ GA R T + KK VRGEAK+ I+LPK ALEGG+W LRVEDVS A +AE + +EER FPPLP ET+ LE+
Sbjct: 1 MSAHYTGEIDLQFLRHGQGQYRYPNSVFRYTGKWNTGIKSGLGVFEVVGGSTYEGTFVDGELEGKGSKLWADGRXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXLVLPNGEGSXXXXXXXXXXXXXXXXXXXXGFQFTGTFSGGLPXXXXXXXXXXXXXXXXXXXXXXXXXXXGTYVCGVTGIYWIGEWVEGKAKGLPSKWELELDGDKKTLGGGGDSVGQATPAKPRAKAEKGGGGKK------GAKGSKKPVEEPETDAAYKPVIAHVNDDGDVAALWCRCVRDVQDMPQPPPIPSELQEGVVDELTRPAKEH--PREVVSDESGRTLTVTLHEVTESPQPGSISDPVPFFVRRPDATDVSESLGRFPVQGLVALFQRDERCYPKGTSSDGTALLIVPGEKSAPDTPAEEAEVSPPAKGSKAPA-AKSKGGVKGESEQKPSGDDGIEGLWQVIRSEVQSNRCLVIRAEENFSLRTPPLFDSGLGKTKAEEDGERKNSVLDSEENAGVLEGGVPPEEENTREEGVPGVVHGSSKSVELLQQIEHADDAGEQCTMMVQQHSPFAVCLDFRLDL-MET-----PKGESTDGEGGQEKPLEEEKTMRIVLCGNDVEVSAVMRLWIPPAEPPVGAADNVGMEADRPTEMSGSGASGALAKAGDSRLGAKGGALENASPTTLISPRSGGNAIDDSSSPPTTPTWYLHAISIRCGSFVGTVPCANPEEIALRRKGSTASASESLPSAGTAPHPSRTGFDCDLAEWHALALVASPERVLS-LCIDGEELELKQDAGGTAAAAGIG-CDESE--LSASDAVVLGGGAGGEWASLAVKNLAVYNEFPGIDQLRAITQVFRVWRERKEAARVADVQEDERWEEETRRAEEEEREPGA---GERPEWVVGADRQTILHKKTVRGEAKIDKIVLPKVALEGGDWVLRVEDVSHGEGPDEYGSTGRARSAASAESFVSQVVVPATTATDEERNTFPPLPVETVKLER 982
BLAST of mRNA_H-paniculata_contig302.8191.1 vs. uniprot
Match: A0A6H5L2Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Y6_9PHAE) HSP 1 Score: 345 bits (886), Expect = 5.290e-101 Identity = 384/988 (38.87%), Postives = 490/988 (49.60%), Query Frame = 1
Query: 1 MSNCYSGSVNLKLLRHGKGQYNYPNKAFRFDGRWSDGCKNGEGKFMVEGGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVFSSPTTGETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASGFQYTGDFSLGHPSGFGSATYPGGSTFSGPFEAGLKNGVGGKYACGITGISFVGEWKDGRVVLPPSIWAVEVCNAAASKSGS-DNDNSAKPNTGGKGSKKGKGAAKRKSAMMGAKRQANXXXXXXXXXRETPVVVAFDSDGKVSDLWCRCVRNTQDIGDVKNHPQILEDDGGNP--RRKLWPPREVVSTESGRTLAVTLHQITPETSPMELGSPSTFFVRRPDVTDVSERLERFPTDRLVAHFPLDKRCWPEGC--DGRLRII-----------------------SRSPSDAS-----GEDGIE---DGALEAQWQTILGDLGSNRCLMLGAGRDLSLTASNVF--AIDRTSGNAAGNEQ---VDIQEGQGG-NGSGVKEPLNKGRIDQAST---------ELLQ---------------TDQSHPVTVCIDYRLDLDMDTLACDNKKSESNICSGREQHSPEKNV--RIVAFGEDLEVWVLLRSSTPP--PPEDIIPDVGTTETPSAEKKQ-----AVD-APPLFKLP--------GASAKATPCSTWYLHSISARAGSRTITVLCVQSDSERNQQNRSFGTGYEGILGGGKREYKAGGEVVYDATAWHSIALAYDPKCGESVLCLDGDVFPLHANDDAIPAAERFSPCNASESFVNGENTVVIGG-AGGMWTTLAVKNLAVYSVALDNRHVVAVTRVFRRWRKEEDIAAAKXXXXEDFWLEEACQAKKEERRAGQTKHGERPEWIAGATRTTTITKKLVRGEAKLVGIILPKAALEGGEWALRVEDVS---------------VACTAEKLPEADI-------EEERAIFPPLPGETIMLEQ 2643
MS Y+G V+L+ LRHG+GQY YPN FR+ G+W G K+G G F V GGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX SGFQ+TG S F GPF+ G K+G GGKY CG+TGI ++GEW G+ PS W +E+ + G D+ A P ++KG G K GAK + V+ + DG V+ LWCRCVR+ QDI P L++ + R REVVS ESGRTL VTLH++T P + P FFVRRPD TDVSE L RFP L+A F D+RC+P+ DGR +I S++P+ S GE ++ D +E WQ I ++ SNRCL + AG++ SL +F + +T G + +D +E G G GV + R + + ELLQ Q P VC+D+RLDL + K ES G ++ E + RIV G D+EV ++R PP PP DVGT AE A+D A P +P G S+ TWYLH+IS R GS TV C + ++ + E G ++ D WH++AL P+ S LC+DG+ L + + AA ES ++ + VV+GG AGG W +LAVKNLAVY+ + + A+T+VFR WR+ ++ A RA + GERPEW+ GA R T + K+ VRGEAK+ I+LPK ALEGG+W LRVEDVS A AE + +EER FPPLP ET+ LE+
Sbjct: 1 MSAHYTGEVDLQFLRHGQGQYRYPNSVFRYTGKWKAGTKSGLGVFEVLGGSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXEGSYVXXXXXXXXXXXXXXXXXSGFQFTGXXXXXXXXXXXXXXXXXXSLFHGPFDKGRKHGRGGKYVCGVTGICWIGEWVAGKAKGLPSKWELELDGDNKTLGGGRDSVGQATPAKPRAKAEKGGGGKK------GAKISKKAVEEPETDAADKLVIAHVNDDGDVAALWCRCVRDVQDIPQPPPIPSELQEGVVDELTRPAKGHQREVVSDESGRTLTVTLHEVTESPQPGSISDPVPFFVRRPDATDVSESLGRFPVKGLIALFQRDERCYPKETTGDGRTLLIVPGAKPAPDTPAEEAEISPPAKGSKAPAAKSKGGVKGESELKPFGDDGIEGLWQVIRSEVQSNRCLEIRAGKNFSLRTPPLFDTGLGKTKEQEDGERRKSVLDSEENAGVLEGGGVPPEVENTREEDVTVVVHGSSKPVELLQPIENADGAGEQRTMMVQQHSPFAVCLDFRLDL------MEAPKGESTDGEGGQEKRLEHEMIMRIVLCGNDVEVSAVIRLWIPPTEPPVGAADDVGTEADRPAEMSGSGASGALDNASPTTLIPPRGGGNAIGDSSSPPTTPTWYLHAISIRCGSFVGTVPCANPEDRAVRRKVPTASASESWPSAGAAPPRSERGFECDLAEWHALALVASPERVLS-LCIDGEELELLQDAEGTAAAAGIG---YDESELSASDAVVLGGGAGGEWASLAVKNLAVYNESPGIDQLRAITQVFRVWRERKEAA-----------------------RATDVQEGERPEWVVGADRETILQKRTVRGEAKIDKIVLPKVALEGGDWVLRVEDVSHGEGPDEHGSTGRARSAALAESFVSQVVVPATTATDEERNTFPPLPVETVKLER 948 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig302.8191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig302.8191.1 >prot_H-paniculata_contig302.8191.1 ID=prot_H-paniculata_contig302.8191.1|Name=mRNA_H-paniculata_contig302.8191.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=885bp MSNCYSGSVNLKLLRHGKGQYNYPNKAFRFDGRWSDGCKNGEGKFMVEGGback to top mRNA from alignment at H-paniculata_contig302:25960..31316+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig302.8191.1 ID=mRNA_H-paniculata_contig302.8191.1|Name=mRNA_H-paniculata_contig302.8191.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5357bp|location=Sequence derived from alignment at H-paniculata_contig302:25960..31316+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig302:25960..31316+ >mRNA_H-paniculata_contig302.8191.1 ID=mRNA_H-paniculata_contig302.8191.1|Name=mRNA_H-paniculata_contig302.8191.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5310bp|location=Sequence derived from alignment at H-paniculata_contig302:25960..31316+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |