mRNA_H-paniculata_contig302.8188.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig302.8188.1 vs. uniprot
Match: A0A6H5L501_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L501_9PHAE) HSP 1 Score: 388 bits (996), Expect = 3.920e-117 Identity = 234/475 (49.26%), Postives = 286/475 (60.21%), Query Frame = 1
Query: 406 MSDL-PMPPPRFPESKFSTARVEREDGVGCLLVSRTSGRRFFCP-DGSPSLQTQFG-AVCKIFEAWGTDITQEEEDSLPDEHEDRNVEGSSIVIFDGRVFRYYPARPMALKTSHIDMLKLEANYQQRELGELTGEDPLKEVAALQLLQSHPN---------------VEELEEAMTDGTNLYKVTPWYEGGELFDLAPMPEQSAKTVFAQLLDGLEFLHSSGVCHRDISLENILMDIRMPDRSSASCRSSSVSSVGSCISVASSAFSCDDHSISNSSRTNDNDNGSPRSCFGDATVVPNRGGESDEFTPSRREDHGGNSSGASQEQQAGEKAQANEGSSWIGRPRLCDFGMSVRIPRSKS-GKRVPITPQGRCGKNTCVAPEVFNDEVFDAEAIDTWSLGTTLFMALLGVQPWEEVGDYKFQAIAEGKNLEVVLEGWKIRHLLSQEAVDLLQLLLTADPVERLSDPKIILLHPWF 1773
M D+ P P FP+ +S A V E GVG LLVS+TS R+FFCP S S+QTQFG AV ++EA D +E++D S++IF G++ RY P+ P+ALKT+ I +LKLEA +Q+ +GEL GEDP+KE+A+LQLLQ VEEL EA+ D T LYK++PWY GGELFDLAPM E A+ +F+Q+LD + F+HS GVCHRDISLENILMD SS S R+ + +P GG+ + A + + W G PRLCDFGMSVRIP S + G R P+TPQGRCGK+TCVAPEVF D+ FD AIDTWS+GTTLFMALLGVQPWEEVGD+KFQAIAEGKNL+VVL+GWK+R +S EAVDLLQ +LTADP ERLSD K IL HPWF
Sbjct: 1 MRDMAPQASPVFPKPIYSRAVVSNEPGVGSLLVSQTSARQFFCPAKDSRSIQTQFGGAVQTVYEATPFDPKEEDQDER------------SMIIFGGKLLRYCPSCPLALKTNRISVLKLEAQWQRCAMGELVGEDPVKEIASLQLLQGDDESTXXXXXXXXXXXXGVEELIEALADDTTLYKISPWYSGGELFDLAPMSEDVARPIFSQILDAVSFVHSKGVCHRDISLENILMDT-----SSVSKRACAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSP-----QGGSCT-------AERRKTTDVEGEWFGTPRLCDFGMSVRIPTSPATGNRAPLTPQGRCGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEEVGDFKFQAIAEGKNLDVVLQGWKLRDAISDEAVDLLQAMLTADPEERLSDIKSILCHPWF 446
BLAST of mRNA_H-paniculata_contig302.8188.1 vs. uniprot
Match: D8LS94_ECTSI (Stress kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS94_ECTSI) HSP 1 Score: 317 bits (812), Expect = 9.640e-94 Identity = 196/474 (41.35%), Postives = 239/474 (50.42%), Query Frame = 1
Query: 406 MSDL-PMPPPRFPESKFSTARVEREDGVGCLLVSRTSGRRFFCP-DGSPSLQTQFG-AVCKIFEAWGTDITQEEEDSLPDEHEDRNVEGSSIVIFDGRVFRYYPARPMALKTSHIDMLKLEANYQQRELGELTGEDPLKEVAALQLLQS---------------HPNVEELEEAMTDGTNLYKVTPWYEGGELFDLAPMPEQSAKTVFAQLLDGLEFLHSSGVCHRDISLENILMDIRMPDRSSASCRSSSVSSVGSCISVASSAFSCDDHSISNSSRTNDNDNGSPRSCFGDATVVPNRGGESDEFTPSRREDHGGNSSGASQEQQAGEKAQANEGSSWIGRPRLCDFGMSVRIPRSKSGKRVPITPQGRCGKNTCVAPEVFNDEVFDAEAIDTWSLGTTLFMALLGVQPWEEVGDYKFQAIAEGKNLEVVLEGWKIRHLLSQEAVDLLQLLLTADPVERLSDPKIILLHPWF 1773
M D+ P P FP+ +S A V E GVG LLVS+TS R+FFCP S +QTQFG AV ++EA D +E++D S++IF G++ RY P+ P+ALKT+ I +LKLEA +Q+ +GEL GEDP+KE+A+LQLLQ H VEEL EA+ D T LYK++PWY GGELFDLAPM E AK +F+Q+LD + F+HS G R P+TPQGRCGK+TCVAPEVF D+ FD AIDTWS+GTTLFMALLGVQPWEEVGD+KFQAIAEGKNL+VVL+GWK+R +S EAVDLLQ +LTADP ERLSD K IL HPWF
Sbjct: 1 MRDMAPQASPVFPKPVYSRAVVSNEPGVGSLLVSQTSARQFFCPAKDSRFIQTQFGGAVQTVYEATPFDPKEEDQDER------------SVIIFGGKLLRYCPSCPLALKTNRISVLKLEAQWQRCAMGELVGEDPVKEIASLQLLQGGDELAASAAGAAGGGHDGVEELIEALADDTTLYKISPWYSGGELFDLAPMSEDVAKPIFSQILDAVSFVHSKG-------------------------------------------------------------------------------------------------------------------------------------------NRAPLTPQGRCGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEEVGDFKFQAIAEGKNLDVVLQGWKLRDAISDEAVDLLQAMLTADPEERLSDIKSILSHPWF 323
BLAST of mRNA_H-paniculata_contig302.8188.1 vs. uniprot
Match: A0A6H5K2Q5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2Q5_9PHAE) HSP 1 Score: 104 bits (260), Expect = 1.980e-19 Identity = 83/213 (38.97%), Postives = 104/213 (48.83%), Query Frame = 1
Query: 427 PPRFPESKFSTARVEREDGVGCLLVSRTSGRRFFCPDGSPSLQTQFGAVCKIFEAWGTDITQEEEDSLPDEHEDRNVEGSSIVIFDGRVFRYYPARPMALKTSHIDMLKLEANYQQRELGELTGEDPLKEVAALQLLQSHPNVEELEEAMTDGTNLYKVTPWYEGGELFDL----APMPEQSAKTVFAQLLDGLEFLHSSGVCHRDISLENIL 1053
P FPE FS A + LVS+ +GRR+ D S Q QFG V + E LP G ++ PA P A I LKLE E+ T EDPLKEVAALQ L HPNV + EA+ D N+Y VTP++ GGE+F++ E A+ +F Q+LDGL L GVCHRD+SLEN+L
Sbjct: 165 PLSFPEPNFSPALKVVDYDESVTLVSQATGRRWRVVDSSR--QCQFGEVLRAVE-------------LP---------GEAV-----------PAVPPAYFA--IKELKLEKLI---EMQGRTHEDPLKEVAALQYLPKHPNVLDCTEALLDENNMYIVTPFFSGGEVFNVLSASGQFEEGQARLLFRQVLDGLLHLKRHGVCHRDVSLENLL 337
BLAST of mRNA_H-paniculata_contig302.8188.1 vs. uniprot
Match: A0A7S3P5F0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5F0_9STRA) HSP 1 Score: 104 bits (260), Expect = 3.820e-19 Identity = 95/310 (30.65%), Postives = 145/310 (46.77%), Query Frame = 1
Query: 874 MTDGTNLYKVTPWYEGGELFDLAPMPEQ----SAKTVFAQLLDGLEFLHSSGVCHRDISLENILMDIRMPDRSSASCRSSSVSSVGSCISVASSAFSCDDHSISNSSRTN-DNDNGSPRSCFGDATVVPNRGGESDEFTPSRREDHGGNSSGASQEQQAGEKAQANEGSSWIGRPRLCDFGMSVRIPRSKSGKRVPITPQGRCGKNTCVAPEVF-NDEVFDAEAIDTWSLGTTLFMALLGVQPWEEV--GDYKFQAIAEGKNLEVVLEGWKIRHLLSQEAVDLLQLLLTADPVERLSDPKIILLHPWFTN 1779
+TD +LY + P+ GGELFD M E+ A+ Q+L+G+E L +G+CHRD+SLEN+L+ R+ A + +G C+ + F S+ + D ++ S + FG+ TV G + T + + H RPR R+ I PQG CGK ++PE++ N E FD A+D W+ G LF+ L G PWE D +F+ + G ++++ E W+I LS +A+DLLQ +L DP +RL ++ HPW TN
Sbjct: 311 LTDDRHLYSIMPYCNGGELFDRLDMNERFSEGEARYWMVQVLNGIENLQDAGICHRDMSLENLLVH-----RNGAL-----IIDMGMCLRI---PFEQPQQQAQQSAPLSADRNHASLATSFGNLTV---NGTTTAATTTTAGKPH---------------------------RPR-----------------RLLIKPQGTCGKWIYMSPEIYRNAEAFDGFAVDMWAAGVILFLMLTGFPPWERACPTDERFRYMTAGYLVQMLTE-WEIG--LSGDAMDLLQRMLFLDPKDRLCLQQV-KAHPWMTN 556
BLAST of mRNA_H-paniculata_contig302.8188.1 vs. uniprot
Match: D7FTS8_ECTSI (SOS2 (SALT OVERLY SENSITIVE 2) kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS8_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 5.380e-18 Identity = 79/212 (37.26%), Postives = 102/212 (48.11%), Query Frame = 1
Query: 436 FPESKFSTARVEREDGVGCLLVSRTSGRRFFCPDGSPSLQTQFGAVCKIFEAWGTDITQEEEDSLPDEHEDRNVEGSSIVIFDGRVFRYYPARPMALKTSHIDMLKLEANYQQRELGELTGEDPLKEVAALQLLQSHPNVEELEEAMTDGTNLYKVTPWYEGGELFDLAP----MPEQSAKTVFAQLLDGLEFLHSSGVCHRDISLENILMD 1059
FP FS A E+ L S+ +GRR+ S S + QFG V + E +T EE SS F A+K ++D L RE+ T EDPL+EVAALQ L SHPNV EA+ D ++Y VTP+Y GGE+FD E A+ +F Q+L L L GVCHRD+SLEN+L+D
Sbjct: 72 FPMPTFSKALKVMEN-ESYTLRSQATGRRWRAV--SSSRECQFGEVLRAVE-----VTDEE------------AAASSPAYF-------------AIKELNLDKL--------REVQGRTYEDPLREVAALQFLSSHPNVLPCTEALWDSDSIYIVTPFYSGGEVFDALTDRGRYEEGEARPLFRQVLHALRHLKIHGVCHRDVSLENLLLD 242
BLAST of mRNA_H-paniculata_contig302.8188.1 vs. uniprot
Match: A0A7S1VWT6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VWT6_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 4.340e-17 Identity = 95/355 (26.76%), Postives = 151/355 (42.54%), Query Frame = 1
Query: 799 EDPLKEVAALQLL------QSHPNVEELE---------------EAMTDGTNLYKVTPWYEGGELFDLAPMPEQ----SAKTVFAQLLDGLEFLHSSGVCHRDISLENILMDIRMPDRSSASCRSSSVSSVGSCISVASSAFSCDDHSISNSSRTNDNDNGSPRSCFGDATVVPNRGGESDEFTPSRREDHGGNSSGASQEQQAGEKAQANEGSSWIGRPRLCDFGMSVRIPRSKSGKRVPITPQGRCGKNTCVAPEVF-NDEVFDAEAIDTWSLGTTLFMALLGVQPWEE--VGDYKFQAIAEGKNLEVVLEGWKIRHLLSQEAVDLLQLLLTADPVERLSDPKIILLHPWFTN 1779
EDP+KEV+A+ L Q V+ E + ++D +LY + P+ +GGELF+ + E+ A+ Q+L+GLE + +G+CHRD+SLEN+L+ C + +G C+ V GG D T S + N + I ++ + + ++ R ITPQG CGK ++PE++ N + FD A+D W+ G LF+ L G PWE + D +F+ + G ++++ E W I LS +A+DLLQ +L D +RLS ++ HPW N
Sbjct: 170 EDPIKEVSAMAYLKQWYSSQKEQTVDSAEASFDAMEDTNIMMPLDLLSDDRHLYSIMPFCDGGELFERLDLNERFSEGEARYWMFQVLNGLENMQRAGICHRDMSLENLLVH-------KDGCL---IIDMGMCL-----------------------------------RVPYTNGGTGDALTESF------------------DNLALNGKRNTIPFEKVDNISPINAVRDGRNTPRQMITPQGTCGKWIYMSPEIYKNKDPFDGFAVDIWAAGVILFLMLTGFPPWERACLTDDRFKYMTAGYLVQMLTE-WDIG--LSSDAMDLLQRMLWLDAKDRLSLEQV-RAHPWMAN 457
BLAST of mRNA_H-paniculata_contig302.8188.1 vs. uniprot
Match: D8LLV2_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV2_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 3.930e-16 Identity = 75/211 (35.55%), Postives = 102/211 (48.34%), Query Frame = 1
Query: 436 FPESKFSTARVEREDGVGCLLVSRTSGRRFFCPDGSPSLQTQFGAVCKIFEAWGTDITQEEEDSLPDEHEDRNVEGSSIVIFDGRVFRYYPARPMALKTSHIDMLKLEANYQQRELGELTGEDPLKEVAALQLLQSHPNVEELEEAMTDGTNLYKVTPWYEGGELFDL----APMPEQSAKTVFAQLLDGLEFLHSSGVCHRDISLENILM 1056
FPE FS A ++ D LVS+ +GRR+ D S + QFG V + E L DE ARP + + +L + Q G+ T EDPL+EV+ALQ L SHPNV EA+ D ++Y V P+Y GGE+FD+ E A+ + Q+LDGL L GVCHRD+SLEN+++
Sbjct: 66 FPEPSFSPA-LKVVDCDSFTLVSQATGRRWRAIDSSR--ECQFGEVLRAVE-------------LSDEA---------------------GARP-----GYFAIKELSLGHLQEMQGK-TLEDPLREVSALQYLPSHPNVLTCTEALLDENSIYIVMPFYSGGEVFDVLMDSGRFEEDEARLLLRQVLDGLLHLKRHGVCHRDVSLENLVL 233
BLAST of mRNA_H-paniculata_contig302.8188.1 vs. uniprot
Match: B7FXF7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXF7_PHATC) HSP 1 Score: 95.1 bits (235), Expect = 5.170e-16 Identity = 105/380 (27.63%), Postives = 160/380 (42.11%), Query Frame = 1
Query: 799 EDPLKEVAALQLLQS--------------------HP--------------NVEELEEAMTDGTNLYKVTPWYEGGELFDLAPMPEQ----SAKTVFAQLLDGLEFLHSSGVCHRDISLENILMDIRMPDRSSASCRSSSVSSVGSCISVASSAFSCDDHSISNSSRTNDNDNGSPRSCFGDATVVPNRGGESDEFTPSRREDHGGNSSGASQEQQAGEKAQANEGSSWIGR-------PRLCDFGMSVRIPRS-----KSGKRVPITPQGRCGKNTCVAPEVF-NDEVFDAEAIDTWSLGTTLFMALLGVQPWEEV--GDYKFQAIAEGKNLEVVLEGWKIRHLLSQEAVDLLQLLLTADPVERLSDPKIILLHPWFTN 1779
EDP+KEV+A+Q L S HP N+ + ++D NLY V P+ GGELF+ M E+ A+ Q+L+G+E L ++G+CHRD+SLEN+L+ ++NG+ G VP +++HG ++ E+QA +Q+ + + G P I K +R+ ITPQG CGK ++PE++ N FD A+D W+ G LF+ L G PWE D +F+ + G ++++ E W I LS +A+DLLQ +L DP +RLS ++ HPW N
Sbjct: 297 EDPIKEVSAMQYLVSWHRSERKECEQQVLSSASTEHPRDGVSRSVRAMVATNIMMPLDLLSDDRNLYSVMPYCNGGELFERLDMNERFSEPEARYWMNQVLNGIETLQNAGICHRDMSLENLLV----------------------------------------------HENGALIIDLGMCLRVP------------VQKEHGSDTP----EEQAQFLSQSFDTMNMNGNNSTALLTPXXXXXXXXXXIRGGATICRKQPRRL-ITPQGTCGKWIYMSPEIYKNAAPFDGFAVDMWAAGVILFLMLTGFPPWERACQTDERFKYMTAGYLVQMLTE-WDIG--LSPDAMDLLQRMLFLDPKDRLSLEQV-RAHPWMVN 609
BLAST of mRNA_H-paniculata_contig302.8188.1 vs. uniprot
Match: A0A7S2XTY4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTY4_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 8.470e-16 Identity = 88/328 (26.83%), Postives = 141/328 (42.99%), Query Frame = 1
Query: 874 MTDGTNLYKVTPWYEGGELFDLAPMPEQ----SAKTVFAQLLDGLEFLHSSGVCHRDISLENILMDIRMPDRSSASCRSSSVSSVGSCISVASSAFSCDDHSI------------SNSSRTNDNDNGSPRS-------CFGDATVVPNRGGESDEFTPSRREDHGGNSSGASQEQQAGEKAQANEGSSWIGRPRLCDFGMSVRIPRSKSGKRVPITPQGRCGKNTCVAPEVFNDEV-FDAEAIDTWSLGTTLFMALLGVQPWEEV--GDYKFQAIAEGKNLEVVLEGWKIRHLLSQEAVDLLQLLLTADPVERLSDPKIILLHPWFTN 1779
+TD LY V P+ +GGELFD ++ A+ Q++ GL+ L +G+CHRD+SLEN+L+ + S + +G C+ V + D S + ++ N ++G+ + FG+ V +G ++ QQ +R I PQG CGK ++PE++ D FD A+D W+ G LF+ L G PWE D +F+ + +G ++++ E W + LS +A+DLLQ +L DP +RLS ++ HPW TN
Sbjct: 11 LTDDRFLYSVMPYCDGGELFDRLDQTDKFTEGQARYWMHQIIMGLDNLQKAGICHRDMSLENLLVHKGV----------SLIIDMGMCLKV---PYEEDPESQLEQQXXXXXXLPNTNTHANATEDGNTNNNMQGLIGAFGNVGV-----------------------NGTNKGQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRCMILPQGTCGKWHYMSPEIYQDSAPFDGFAVDMWATGVILFLMLTGFPPWERPCRTDERFKYMTQGYLVQMLTE-WNVG--LSGDAMDLLQRMLWIDPNDRLSLAQV-RAHPWMTN 298
BLAST of mRNA_H-paniculata_contig302.8188.1 vs. uniprot
Match: W7TKV7_9STRA (Protein kinase, catalytic domain protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKV7_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 4.140e-15 Identity = 54/133 (40.60%), Postives = 83/133 (62.41%), Query Frame = 1
Query: 685 GRVFRYYPARPMALKTSHIDMLKLEANYQQRELGELTGEDPLKEVAALQLLQS---HPNVEELEEAMTDGTNLYKVTPWYEGGELFDLAP-----MPEQSAKTVFAQLLDGLEFLHSSGVCHRDISLENILMD 1059
G V+R P++P+A+K + K+E G L E+P+ E+AALQ++ + H +V+ L E + D +Y V+P+Y+GGELF + +PE A+T F+Q+L GL F+H +CHRD+SLENIL+D
Sbjct: 108 GGVYRLCPSQPVAIKC--VSKQKIEEGR-----GRLR-ENPIDELAALQMVGAGGGHQHVQRLLECLEDDEAIYAVSPFYQGGELFAVIEARGGGLPEARARTFFSQILSGLAFMHDRRLCHRDMSLENILVD 232 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig302.8188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig302.8188.1 >prot_H-paniculata_contig302.8188.1 ID=prot_H-paniculata_contig302.8188.1|Name=mRNA_H-paniculata_contig302.8188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=459bp MSDLPMPPPRFPESKFSTARVEREDGVGCLLVSRTSGRRFFCPDGSPSLQback to top mRNA from alignment at H-paniculata_contig302:2..9285- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig302.8188.1 ID=mRNA_H-paniculata_contig302.8188.1|Name=mRNA_H-paniculata_contig302.8188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9284bp|location=Sequence derived from alignment at H-paniculata_contig302:2..9285- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig302:2..9285- >mRNA_H-paniculata_contig302.8188.1 ID=mRNA_H-paniculata_contig302.8188.1|Name=mRNA_H-paniculata_contig302.8188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2754bp|location=Sequence derived from alignment at H-paniculata_contig302:2..9285- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |