prot_H-paniculata_contig30190.8187.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30190.8187.1
Unique Nameprot_H-paniculata_contig30190.8187.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
BLAST of mRNA_H-paniculata_contig30190.8187.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.860e-20
Identity = 44/74 (59.46%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    1 SPFQRLNGVEPDLSHLRVVGARAFVHIEAQTKKLGAKAFEAVMVGYAFNSKGWRLWNAQNRRVVESRNVVFIET 74
            +P++ L G +  L HLRVVGARAFVH E  TKKL ++A+E  +VGY+ +SK +R++NAQ RRV ESRNV+FIET
Sbjct:  785 TPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIET 858          
BLAST of mRNA_H-paniculata_contig30190.8187.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.870e-20
Identity = 44/74 (59.46%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    1 SPFQRLNGVEPDLSHLRVVGARAFVHIEAQTKKLGAKAFEAVMVGYAFNSKGWRLWNAQNRRVVESRNVVFIET 74
            +P++ L G +  L HLRVVGARAFVH E  TKKL ++A+E  +VGY+ +SK +R++NAQ RRV ESRNV+FIET
Sbjct:  691 TPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIET 764          
BLAST of mRNA_H-paniculata_contig30190.8187.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.880e-20
Identity = 44/74 (59.46%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    1 SPFQRLNGVEPDLSHLRVVGARAFVHIEAQTKKLGAKAFEAVMVGYAFNSKGWRLWNAQNRRVVESRNVVFIET 74
            +P++ L G +  L HLRVVGARAFVH E  TKKL ++A+E  +VGY+ +SK +R++NAQ RRV ESRNV+FIET
Sbjct: 1014 TPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIET 1087          
BLAST of mRNA_H-paniculata_contig30190.8187.1 vs. uniprot
Match: A0A6H5KMG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG0_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.630e-19
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    1 SPFQRLNGVEPDLSHLRVVGARAFVHIEAQTKKLGAKAFEAVMVGYAFNSKGWRLWNAQNRRVVESRNVVFIET 74
            +P++ L G +  L H RVVGARAFVH E  TKKL ++A+E  +VGY+ +SK +R++NAQ RRV ESRNV+FIET
Sbjct:   41 TPYKALFGTDAHLGHPRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIET 114          
BLAST of mRNA_H-paniculata_contig30190.8187.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 3.290e-17
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    3 FQRLNGVEPDLSHLRVVGARAFVHIEAQTKKLGAKAFEAVMVGYAFNSKGWRLWNAQNRRVVESRNVVFIET 74
            ++ L G +  L HLRVVGARAFVH E  TKKL ++A E  +VGY+ +SK +R++NAQ  RV ESRN +FIET
Sbjct:  232 YKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRACEGRLVGYSLDSKSYRIYNAQTTRVRESRNDIFIET 303          
BLAST of mRNA_H-paniculata_contig30190.8187.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 6.100e-17
Identity = 39/74 (52.70%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    1 SPFQRLNGVEPDLSHLRVVGARAFVHIEAQTKKLGAKAFEAVMVGYAFNSKGWRLWNAQNRRVVESRNVVFIET 74
            +P++ L G +  L HLRV+G+RAFVH E  T+KL  +A+E  +VGY+ +SK +R++N++ RRV  SRNVVFIET
Sbjct:  255 TPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRNVVFIET 328          
BLAST of mRNA_H-paniculata_contig30190.8187.1 vs. uniprot
Match: A0A6H5JYJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ5_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.290e-16
Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    1 SPFQRLNGVEPDLSHLRVVGARAFVHIEAQTKKLGAKAFEAVMVGYAFNSKGWRLWNAQNRRVVESRNVVFIET 74
            +P+ +L+   PDLS LRV+GARAF H E   KKL  +AFE  + G+  +S+ +R++N+ N  VVESRNV FIE+
Sbjct:   25 TPYSKLHNKSPDLSGLRVIGARAFAHHERYRKKLDDRAFEGKLCGFGLDSQTYRVFNSSNGAVVESRNVTFIES 98          
BLAST of mRNA_H-paniculata_contig30190.8187.1 vs. uniprot
Match: A0A6H5KQ40_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ40_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.600e-15
Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    1 SPFQRLNGVEPDLSHLRVVGARAFVHIEAQTKKLGAKAFEAVMVGYAFNSKGWRLWNAQNRRVVESRNVVFIET 74
            +P+ +L+   PDLS LRV+GARAFVH E   KKL  +AFE  + G+  +S+ +R+ N  N  VVESRN+ FIE+
Sbjct:  100 TPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNLTFIES 173          
BLAST of mRNA_H-paniculata_contig30190.8187.1 vs. uniprot
Match: A0A6H5JV56_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV56_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.880e-15
Identity = 34/73 (46.58%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    1 SPFQRLNGVEPDLSHLRVVGARAFVHIEAQTKKLGAKAFEAVMVGYAFNSKGWRLWNAQNRRVVESRNVVFIE 73
            +P+ R+ G + +LS LR++G RAFVH+E  T KL  KA+E ++VGY  +S  ++++N + RR+  SRNV FIE
Sbjct:  384 TPYYRMFGKQAELSFLRIIGCRAFVHVEGHTNKLQPKAWEGILVGYNSDSPSFQVYNRETRRITSSRNVTFIE 456          
BLAST of mRNA_H-paniculata_contig30190.8187.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.890e-15
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    1 SPFQRLNGVEPDLSHLRVVGARAFVHIEAQTKKLGAKAFEAVMVGYAFNSKGWRLWNAQNRRVVESRNVVFIET 74
            +P+ +L+   PDLS LRV+GARAFVH E   KKL  +AFE  + G+  +S+ +R+ N  N  VVESRNV FIE+
Sbjct:  257 TPYSKLHNKSPDLSRLRVIGARAFVHQERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30190.8187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJN3_9PHAE1.860e-2059.46Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JYB5_9PHAE1.870e-2059.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE1.880e-2059.46Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KMG0_9PHAE1.630e-1958.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE3.290e-1756.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KL37_9PHAE6.100e-1752.70Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JYJ5_9PHAE1.290e-1650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ40_9PHAE1.600e-1550.00Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JV56_9PHAE1.880e-1546.58Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRJ1_9PHAE1.890e-1551.35Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 10..73
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 10..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30190contigH-paniculata_contig30190:5..226 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30190.8187.1mRNA_H-paniculata_contig30190.8187.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30190 5..226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30190.8187.1 ID=prot_H-paniculata_contig30190.8187.1|Name=mRNA_H-paniculata_contig30190.8187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
SPFQRLNGVEPDLSHLRVVGARAFVHIEAQTKKLGAKAFEAVMVGYAFNS
KGWRLWNAQNRRVVESRNVVFIET
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like